You are here

Home

M747DRAFT_292547-T1, M747DRAFT_292547-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292547-T1
Unique NameM747DRAFT_292547-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:1064090..1066509-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292547-T1 ID=M747DRAFT_292547-T1|Name=M747DRAFT_292547-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2420bp|location=Sequence derived from alignment at KZ851901.1:1064090..1066509- (Aspergillus niger ATCC 13496)
AGAGAAGAAAAAAAGGCAGGCAGGCACCTACCTACCTACCCAACATCTTC
CAAAATGGCCGACGACGGTCTCCTTCTCAACTTCGCCATCCCGGACACGA
CAGTCCTCAGACCCGAAAAAACCAAAGTAAAAGGCGGCACATGGCGGGAC
CGACTCAGCGCAAAGAAAATCGCCGCGCACCGAACGAACAACCCGCGCAA
AGAGAAATCAGCCTCAAATGGCGAGCAGAATAGCAACCCTCGGAATCCGA
ATCGCATTCAAGTATCCGGTCCGCGGCCGGTGAAGAGACAGCGCATTGAA
GATGATGACGGAAACGGAGGATCGCAACCACGCCAGCAGCAGCAACAACA
TCCCGGGGCGCCCCGACAGTTCGTATCATCCCTGTTCTCGAAGAACCCGA
GGCCCCGGAACGCCGTTGAAGAGAAGAACGAAGCCGGAGCCGAGGTAGAG
GACGCCAAGCCGACGAACGCGCCGCTGATCGATGGACTGGACACATTCAC
GAACCTGGGACTATCGGCACCGCTGGCGGCGCATTTGCTGACAAAACTGG
AGGTGAAGGCGCCGACAGCGATTCAGAAAGCGAGTATCACGCAACTATTG
AAGGAGGAGAGTGATGCGTTCATACAGGCCGAGACCGGATCCGGAAAGAC
GATGGCGTATCTGCTGCCGCTTGTGCAACGGATAATGACGATTTCGCTGA
ATCAGAAGAAGAGGGAGGAAGGGGAGCAAGTGCAGCGCGATAGTGGGTTA
TTTGCTATTGTGTTGGCGCCGACGAGAGAGTTGTGTAAGCAGATTGCGGT
GGTATTGGAGGGGTTGTTGCGATGTGCGCATTGGATTGTGGCGGGGACGG
TGATTGGAGGAGAGAAGAAGAAGAGTGAGAAGGCGCGGTTGAGGAAGGGA
TTGAATATCTTGGTTGCGACGCCGGGACGGTTGGCGGATCATTTGGAGAA
TACGCAGGCGTTGGATGTGAGTAATGTGCGGTGGTTGGTGTTGGATGAGG
GAGATCGGTTGATGGAGTTGGGGTTCGAGAAGGAGTTGGCGGGGATTATT
CAGAAGCTGGATGCTAGGCAGCGCCCGAGTCGGATTCCTGGGATCCCCGC
GAAGAGGACGACGATATTGTGTTCGGCTACGTTGAAGATGACTGTGCAGA
AGCTGGGAGAGATCAGTTTGAAGGATGCGGTGCATATTCAGGCGGATCCC
GCGGATGAAGATGGCGAGCCAAGAAAGAAGGACGAGGATGATGCGTTCCG
GGTGCCGGCGCAGCTGAAGCAGTCATATGCGATTGTCGCGTCGAAGCTAC
GGCTTGTTACGCTTACGGCTTTTATGAAACGGACGTTTATGAGAAAGGGG
TCTGTTATGAAGGCTATCATTTTTGTGTCTTGTGCGGACTCTGTCGACTT
CCACTTTGAGGTGTTCACGCGGAAGAATGGAGATGAGGAAGAGAAGAAGG
AAGAGAGTGAGGATAGTGATGAGGAGGATGCAGAAGAGAAGAGGAAGAAG
CTCGGCGCTTCGGCTCATGGAACCATCGCGCCTGCCACGGCCTTTTCGAA
CCCCTCCAACCCGGTGGCGCTGCATAGACTGCACGGTTCTCTGCCTCAAC
ATGTCCGGACAGCCACCCTGGGTGCTTTTGCCCGCAACCGCGAACCTTCC
GTGCTCATCTGTACTGACGTTGCGTCCCGTGGTCTGGATCTGCCGAATGT
TGACCTGGTCGTGGAGTACGACCCTGCCTTCAGCGCCGAGGACCATCTGC
ACAGAATCGGACGTACTGCGCGTCTGGGGCGTGACGGTCGTGCACTCATT
TTCCTCATGCCCGGCTGTGAGGAGGGATACGTCGACATTCTGAAGAAGGG
CTACCGGGACGGTGGAAAGGCTCTGACACGCAACAGCGCGGACGACATTC
TGAAGCGCGGATTTGGAGGAAACGTCGAGTCGCAGAACGTAGACTGGGAG
GAAAAGGCAACCGAATGGCAGCTGGATGTGGAACGATGGGCTTTGGAAAA
CAAAAACTACCTCGAAATGGCCCGGCGAGCTTATCAGTCTCATATTCGCG
CCTATGCCACACATATCGCCAACGAGCGGAGCATGTTCAACATTAAGGAG
CTTCATCTCGGACATCTGGCGAAGAGTTTCGCTCTGCGTGATCGTCCCAG
CAAGATCAATGTCCCTGGTCTTCGCCAAGCACAGGCTGACACCAAGAAGG
ATTTCAAGGCCGACCGCAAACCGGTCGCTGGAAAGAAGAGGAAGGCTGGT
GGTCACGACGACGACGATGATGATGTTCCTCGTCAAACCGACACTCTCAC
GGCAGCTCAAAAGATGAGGGCCAAGATGAAGGAGCACATGGCCGGTGCAA
GCGAGTTCAATCTTGCTTGATCGGCAGCATACATGTAAATAGTAATTGAC
GACAAATCAATAGATATCCC
back to top

Coding sequence (CDS) from alignment at KZ851901.1:1064090..1066509-

>M747DRAFT_292547-T1 ID=M747DRAFT_292547-T1|Name=M747DRAFT_292547-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2316bp|location=Sequence derived from alignment at KZ851901.1:1064090..1066509- (Aspergillus niger ATCC 13496)
ATGGCCGACGACGGTCTCCTTCTCAACTTCGCCATCCCGGACACGACAGT
CCTCAGACCCGAAAAAACCAAAGTAAAAGGCGGCACATGGCGGGACCGAC
TCAGCGCAAAGAAAATCGCCGCGCACCGAACGAACAACCCGCGCAAAGAG
AAATCAGCCTCAAATGGCGAGCAGAATAGCAACCCTCGGAATCCGAATCG
CATTCAAGTATCCGGTCCGCGGCCGGTGAAGAGACAGCGCATTGAAGATG
ATGACGGAAACGGAGGATCGCAACCACGCCAGCAGCAGCAACAACATCCC
GGGGCGCCCCGACAGTTCGTATCATCCCTGTTCTCGAAGAACCCGAGGCC
CCGGAACGCCGTTGAAGAGAAGAACGAAGCCGGAGCCGAGGTAGAGGACG
CCAAGCCGACGAACGCGCCGCTGATCGATGGACTGGACACATTCACGAAC
CTGGGACTATCGGCACCGCTGGCGGCGCATTTGCTGACAAAACTGGAGGT
GAAGGCGCCGACAGCGATTCAGAAAGCGAGTATCACGCAACTATTGAAGG
AGGAGAGTGATGCGTTCATACAGGCCGAGACCGGATCCGGAAAGACGATG
GCGTATCTGCTGCCGCTTGTGCAACGGATAATGACGATTTCGCTGAATCA
GAAGAAGAGGGAGGAAGGGGAGCAAGTGCAGCGCGATAGTGGGTTATTTG
CTATTGTGTTGGCGCCGACGAGAGAGTTGTGTAAGCAGATTGCGGTGGTA
TTGGAGGGGTTGTTGCGATGTGCGCATTGGATTGTGGCGGGGACGGTGAT
TGGAGGAGAGAAGAAGAAGAGTGAGAAGGCGCGGTTGAGGAAGGGATTGA
ATATCTTGGTTGCGACGCCGGGACGGTTGGCGGATCATTTGGAGAATACG
CAGGCGTTGGATGTGAGTAATGTGCGGTGGTTGGTGTTGGATGAGGGAGA
TCGGTTGATGGAGTTGGGGTTCGAGAAGGAGTTGGCGGGGATTATTCAGA
AGCTGGATGCTAGGCAGCGCCCGAGTCGGATTCCTGGGATCCCCGCGAAG
AGGACGACGATATTGTGTTCGGCTACGTTGAAGATGACTGTGCAGAAGCT
GGGAGAGATCAGTTTGAAGGATGCGGTGCATATTCAGGCGGATCCCGCGG
ATGAAGATGGCGAGCCAAGAAAGAAGGACGAGGATGATGCGTTCCGGGTG
CCGGCGCAGCTGAAGCAGTCATATGCGATTGTCGCGTCGAAGCTACGGCT
TGTTACGCTTACGGCTTTTATGAAACGGACGTTTATGAGAAAGGGGTCTG
TTATGAAGGCTATCATTTTTGTGTCTTGTGCGGACTCTGTCGACTTCCAC
TTTGAGGTGTTCACGCGGAAGAATGGAGATGAGGAAGAGAAGAAGGAAGA
GAGTGAGGATAGTGATGAGGAGGATGCAGAAGAGAAGAGGAAGAAGCTCG
GCGCTTCGGCTCATGGAACCATCGCGCCTGCCACGGCCTTTTCGAACCCC
TCCAACCCGGTGGCGCTGCATAGACTGCACGGTTCTCTGCCTCAACATGT
CCGGACAGCCACCCTGGGTGCTTTTGCCCGCAACCGCGAACCTTCCGTGC
TCATCTGTACTGACGTTGCGTCCCGTGGTCTGGATCTGCCGAATGTTGAC
CTGGTCGTGGAGTACGACCCTGCCTTCAGCGCCGAGGACCATCTGCACAG
AATCGGACGTACTGCGCGTCTGGGGCGTGACGGTCGTGCACTCATTTTCC
TCATGCCCGGCTGTGAGGAGGGATACGTCGACATTCTGAAGAAGGGCTAC
CGGGACGGTGGAAAGGCTCTGACACGCAACAGCGCGGACGACATTCTGAA
GCGCGGATTTGGAGGAAACGTCGAGTCGCAGAACGTAGACTGGGAGGAAA
AGGCAACCGAATGGCAGCTGGATGTGGAACGATGGGCTTTGGAAAACAAA
AACTACCTCGAAATGGCCCGGCGAGCTTATCAGTCTCATATTCGCGCCTA
TGCCACACATATCGCCAACGAGCGGAGCATGTTCAACATTAAGGAGCTTC
ATCTCGGACATCTGGCGAAGAGTTTCGCTCTGCGTGATCGTCCCAGCAAG
ATCAATGTCCCTGGTCTTCGCCAAGCACAGGCTGACACCAAGAAGGATTT
CAAGGCCGACCGCAAACCGGTCGCTGGAAAGAAGAGGAAGGCTGGTGGTC
ACGACGACGACGATGATGATGTTCCTCGTCAAACCGACACTCTCACGGCA
GCTCAAAAGATGAGGGCCAAGATGAAGGAGCACATGGCCGGTGCAAGCGA
GTTCAATCTTGCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP7M747DRAFT_292547Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292547-T1.cdsM747DRAFT_292547-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292547-T1.utr3p1M747DRAFT_292547-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292547-T1.exon1M747DRAFT_292547-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292547-T1.utr5p1M747DRAFT_292547-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292547-T1M747DRAFT_292547-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260KNR
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR025313
DBxrefInterPro:IPR001650
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF13959
DBxrefPFAM:PF00270
ProductATP-dependent RNA helicase dbp7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:1064090..1066509 -
Powered by Drupal