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M747DRAFT_292812-T1, M747DRAFT_292812-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292812-T1
Unique NameM747DRAFT_292812-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851902.1:853321..854813-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292812-T1 ID=M747DRAFT_292812-T1|Name=M747DRAFT_292812-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1493bp|location=Sequence derived from alignment at KZ851902.1:853321..854813- (Aspergillus niger ATCC 13496)
GGAGGATTTCCCCGTACCTCCCTCGTCCTCCAGGCGTTCTCATTCTACTA
GCTGAGCCTCCGAATCCCTTCAGAGTCCTCCACGATGCCTTCACTCCGTC
TTCCCAAACTACCAATACCCCGGCCCTCCTACCGGGGCTACTCCACCTCC
GCACCATCCCCTTCCTCACGCCTGAACCTCCCCATCGACTACAGATCGAC
ACCGCTCCTCCACCACACGGCCTCCAGCCTCTCAAACCACCCAGACCTCC
CTAGCAATGCGACCTCCAAATCCATCAACTTCTACCAAGCCATCAACTCC
GCATTACGCACCGCCCTCTCCACCTCCAACAAGGTGATGCTCTTCGGCGA
AGATGTCGCTTTTGGCGGCGTCTTCCGCTGCTCGATGGATCTACAAACCG
AATTCGGTTCTGAACGGGTCTTCAACACACCCCTAACAGAGCAAGGGATC
GTCGGCTTTGCAATCGGTGCAGCGGCCCAGGGAATGAAGCCTGTTGCGGA
GATTCAATTCGCAGACTACGTGTTCCCAGCGTTCGATCAGATCGTGAACG
AGGCGGCGAAATTCCGGTTCCGGGAGGGAGCAACCGGTGTGGATATTGGG
GGGATGGTGGTGCGGATGCCGTGTGGTGCGGTCGGACATGGTGCTTTGTG
GGTGGCATACCATGTTCCTGTTTGCTGAGTAGGGGAAGAAGATGGCTAAC
GCTGTGGACTACAAACTAGGTACCACTCCCAATCACCAGAAGCACTGTTC
GCACATGTTCCTGGCGTACAAGTCGTCATGCCTCGCTCCCCATCCCAAGC
TAAAGGCCTGCTCTTGTCCTCGATCTTTGAGTCTCAGAATCCCGTCATCT
TCATGGAACCGAAAATCCTCTATCGTGCCGCGGTAGAACACGTCCCGAGC
GAGTACTACACCATCCCATTGAACACGGCGGAGGTTATTAAGCCAGGGAA
CGACCTGACGATAGTCTCGTACGGACAGCCACTATACCTCTGCTCCGCGG
CCATCGAAGCAGCCGAGAGGGCATTCGGGGCGAGTATCGAGCTGATCGAT
CTGCGCACGATCTACCCGTGGGACAGACCTACGGTATTGGATAGTGTGAA
GAAGACGGGACGGGCGATCGTCGTCCATGAGAGCATGATCAACTACGGAG
TCGGCGCCGAGGTGGCTGCTACCATACAAGATGGAGCGTTCTTGCGTCTA
GAGGCACCGGTCAAGAGAGTCGCGGGATGGAGTACGCATACCGGACTGAT
GTATGAGAAGTTTGTGATTCCGGATGTTGCGAGTACGTATATCTATCCTA
TACACGCCTGAAATATGCTAACGATATCCAGGGATATACGATGCGATCAA
GCAGACTCTTGAGTATTGATTGACAGAGACATATCAGCGAAGTGAGAATA
ATGTACATACCAGGATCAAAGATCCAACATTTGAGTGCTGTTGCCCATAG
GACTACTATAAAGCGGCATTATGATAGACAATATCAATCTACC
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Coding sequence (CDS) from alignment at KZ851902.1:853321..854813-

>M747DRAFT_292812-T1 ID=M747DRAFT_292812-T1|Name=M747DRAFT_292812-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3492bp|location=Sequence derived from alignment at KZ851902.1:853321..854813- (Aspergillus niger ATCC 13496)
GGATATACGATGCGATCAAGCAGACTCTTGAGTATTGAGTACCACTCCCA
ATCACCAGAAGCACTGTTCGCACATGTTCCTGGCGTACAAGTCGTCATGC
CTCGCTCCCCATCCCAAGCTAAAGGCCTGCTCTTGTCCTCGATCTTTGAG
TCTCAGAATCCCGTCATCTTCATGGAACCGAAAATCCTCTATCGTGCCGC
GGTAGAACACGTCCCGAGCGAGTACTACACCATCCCATTGAACACGGCGG
AGGTTATTAAGCCAGGGAACGACCTGACGATAGTCTCGTACGGACAGCCA
CTATACCTCTGCTCCGCGGCCATCGAAGCAGCCGAGAGGGCATTCGGGGC
GAGTATCGAGCTGATCGATCTGCGCACGATCTACCCGTGGGACAGACCTA
CGGTATTGGATAGTGTGAAGAAGACGGGACGGGCGATCGTCGTCCATGAG
AGCATGATCAACTACGGAGTCGGCGCCGAGGTGGCTGCTACCATACAAGA
TGGAGCGTTCTTGCGTCTAGAGGCACCGGTCAAGAGAGTCGCGGGATGGA
GTACGCATACCGGACTGATGTATGAGAAGTTTGTGATTCCGGATGTTGCG
AATGCCTTCACTCCGTCTTCCCAAACTACCAATACCCCGGCCCTCCTACC
GGGGCTACTCCACCTCCGCACCATCCCCTTCCTCACGCCTGAACCTCCCC
ATCGACTACAGATCGACACCGCTCCTCCACCACACGGCCTCCAGCCTCTC
AAACCACCCAGACCTCCCTAGCAATGCGACCTCCAAATCCATCAACTTCT
ACCAAGCCATCAACTCCGCATTACGCACCGCCCTCTCCACCTCCAACAAG
GTGATGCTCTTCGGCGAAGATGTCGCTTTTGGCGGCGTCTTCCGCTGCTC
GATGGATCTACAAACCGAATTCGGTTCTGAACGGGTCTTCAACACACCCC
TAACAGAGCAAGGGATCGTCGGCTTTGCAATCGGTGCAGCGGCCCAGGGA
ATGAAGCCTGTTGCGGAGATTCAATTCGCAGACTACGTGTTCCCAGCGTT
CGATCAGATCGTGAACGAGGCGGCGAAATTCCGGTTCCGGGAGGGAGCAA
CCGGTGTGGATATTGGGGGGATGGTGGTGCGGATGCCGTGTGGTGCGGTC
GGACATGGTGCTTTGGATATACGATGCGATCAAGCAGACTCTTGAGTATT
GAGTACCACTCCCAATCACCAGAAGCACTGTTCGCACATGTTCCTGGCGT
ACAAGTCGTCATGCCTCGCTCCCCATCCCAAGCTAAAGGCCTGCTCTTGT
CCTCGATCTTTGAGTCTCAGAATCCCGTCATCTTCATGGAACCGAAAATC
CTCTATCGTGCCGCGGTAGAACACGTCCCGAGCGAGTACTACACCATCCC
ATTGAACACGGCGGAGGTTATTAAGCCAGGGAACGACCTGACGATAGTCT
CGTACGGACAGCCACTATACCTCTGCTCCGCGGCCATCGAAGCAGCCGAG
AGGGCATTCGGGGCGAGTATCGAGCTGATCGATCTGCGCACGATCTACCC
GTGGGACAGACCTACGGTATTGGATAGTGTGAAGAAGACGGGACGGGCGA
TCGTCGTCCATGAGAGCATGATCAACTACGGAGTCGGCGCCGAGGTGGCT
GCTACCATACAAGATGGAGCGTTCTTGCGTCTAGAGGCACCGGTCAAGAG
AGTCGCGGGATGGAGTACGCATACCGGACTGATGTATGAGAAGTTTGTGA
TTCCGGATGTTGCGAATGCCTTCACTCCGTCTTCCCAAACTACCAATACC
CCGGCCCTCCTACCGGGGCTACTCCACCTCCGCACCATCCCCTTCCTCAC
GCCTGAACCTCCCCATCGACTACAGATCGACACCGCTCCTCCACCACACG
GCCTCCAGCCTCTCAAACCACCCAGACCTCCCTAGCAATGCGACCTCCAA
ATCCATCAACTTCTACCAAGCCATCAACTCCGCATTACGCACCGCCCTCT
CCACCTCCAACAAGGTGATGCTCTTCGGCGAAGATGTCGCTTTTGGCGGC
GTCTTCCGCTGCTCGATGGATCTACAAACCGAATTCGGTTCTGAACGGGT
CTTCAACACACCCCTAACAGAGCAAGGGATCGTCGGCTTTGCAATCGGTG
CAGCGGCCCAGGGAATGAAGCCTGTTGCGGAGATTCAATTCGCAGACTAC
GTGTTCCCAGCGTTCGATCAGATCGTGAACGAGGCGGCGAAATTCCGGTT
CCGGGAGGGAGCAACCGGTGTGGATATTGGGGGGATGGTGGTGCGGATGC
CGTGTGGTGCGGTCGGACATGGTGCTTTGGATATACGATGCGATCAAGCA
GACTCTTGAGTATTGAGTACCACTCCCAATCACCAGAAGCACTGTTCGCA
CATGTTCCTGGCGTACAAGTCGTCATGCCTCGCTCCCCATCCCAAGCTAA
AGGCCTGCTCTTGTCCTCGATCTTTGAGTCTCAGAATCCCGTCATCTTCA
TGGAACCGAAAATCCTCTATCGTGCCGCGGTAGAACACGTCCCGAGCGAG
TACTACACCATCCCATTGAACACGGCGGAGGTTATTAAGCCAGGGAACGA
CCTGACGATAGTCTCGTACGGACAGCCACTATACCTCTGCTCCGCGGCCA
TCGAAGCAGCCGAGAGGGCATTCGGGGCGAGTATCGAGCTGATCGATCTG
CGCACGATCTACCCGTGGGACAGACCTACGGTATTGGATAGTGTGAAGAA
GACGGGACGGGCGATCGTCGTCCATGAGAGCATGATCAACTACGGAGTCG
GCGCCGAGGTGGCTGCTACCATACAAGATGGAGCGTTCTTGCGTCTAGAG
GCACCGGTCAAGAGAGTCGCGGGATGGAGTACGCATACCGGACTGATGTA
TGAGAAGTTTGTGATTCCGGATGTTGCGAATGCCTTCACTCCGTCTTCCC
AAACTACCAATACCCCGGCCCTCCTACCGGGGCTACTCCACCTCCGCACC
ATCCCCTTCCTCACGCCTGAACCTCCCCATCGACTACAGATCGACACCGC
TCCTCCACCACACGGCCTCCAGCCTCTCAAACCACCCAGACCTCCCTAGC
AATGCGACCTCCAAATCCATCAACTTCTACCAAGCCATCAACTCCGCATT
ACGCACCGCCCTCTCCACCTCCAACAAGGTGATGCTCTTCGGCGAAGATG
TCGCTTTTGGCGGCGTCTTCCGCTGCTCGATGGATCTACAAACCGAATTC
GGTTCTGAACGGGTCTTCAACACACCCCTAACAGAGCAAGGGATCGTCGG
CTTTGCAATCGGTGCAGCGGCCCAGGGAATGAAGCCTGTTGCGGAGATTC
AATTCGCAGACTACGTGTTCCCAGCGTTCGATCAGATCGTGAACGAGGCG
GCGAAATTCCGGTTCCGGGAGGGAGCAACCGGTGTGGATATTGGGGGGAT
GGTGGTGCGGATGCCGTGTGGTGCGGTCGGACATGGTGCTTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_292812M747DRAFT_292812Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292812-T1M747DRAFT_292812-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292812-T1.cdsM747DRAFT_292812-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292812-T1.utr3p1M747DRAFT_292812-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292812-T1.exon3M747DRAFT_292812-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_292812-T1.exon2M747DRAFT_292812-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_292812-T1.exon1M747DRAFT_292812-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292812-T1.utr5p1M747DRAFT_292812-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR033248
DBxrefInterPro:IPR009014
DBxrefInterPro:IPR005475
DBxrefPFAM:PF02779
DBxrefPFAM:PF02780
Product2-oxoisovalerate dehydrogenase subunit beta
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851902.1supercontigKZ851902.1:853321..854813 -
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