You are here

Home

M747DRAFT_292818-T1, M747DRAFT_292818-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292818-T1
Unique NameM747DRAFT_292818-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851902.1:870989..872451+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292818-T1 ID=M747DRAFT_292818-T1|Name=M747DRAFT_292818-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1463bp|location=Sequence derived from alignment at KZ851902.1:870989..872451+ (Aspergillus niger ATCC 13496)
CTTCCTGGATCTCCATGTTAAAGTGACCTTCTCGCATCGTCTCAGTCTCT
TTCATAGTTATTGACCTACATACCAGCAATGCTTCTTAATCACTTTTTCA
AATCCAACGGGTCCTTCAGCTATGAAGCACTCCGGGCCGCTGGCTACAGC
AATTACGGTGGTGCAGATCTTGGGGAAGTGATAGCAATATGTTCCAAAAT
CCGGCCTGGAAATGAAGAAGACTGGGTCCGCGAGTGGCGGAATGCCGCAG
AGCGAGCAGTTTCCAACGCAGACCACTCGAAAACAGCCAAAAACAGTGAA
AGTGCCTACCATGGATACCTTCGTGCATCAAATTACTTCCGAACGGCGGA
ATTCTACCGCCGAGAAAATGTCAATGAAGATGAAATATCACAGTCTCTCT
TTGAAAGCTCCGAAAGTTCGTTTGTCAAGGCGATGGAGGTTTCGGAGTTT
TGCTATGAGCCGATTAGTATTCCTTACGAGGAGACATCTTTACCAGGATA
TTTTGTACGATTTGACAGGACAGACAAGCCACTACGCACGATTATCTTCA
ATGGCGGGTTTGACTCAACGGCGAGCGAGGGATGGTTTGCAATTGGGGCA
GCGGCTCTGGCTAGGGGGTATAACTTCCTCGCCTTCGATGGTCCCGGACA
GGGTGCGGCGATCCGAAGCCAAGGGATGCACTTTCGACACGATTGGGAGA
AGGTGCTCACGCCTGTTGTGAACTATGCTATATCTCGCCCAGAAATCAAC
GCTAATGGCATAGTTCTCTTCGGATGGAGCATGGGTGGGTACTTAGTGGC
TAGGGCGGCTACGCAGGAACATCGCGCGGCTGCGATCGTGCTCGATGATG
GCGTGTATGATTTTGGTTCTGCATTTCGAAATGCGCAGCCACTTCTCGTC
CAGAAGCTCGTGGAGCGGAAATATGACGCTGTGCCCAATTTGCTATTTGA
GTTCGTGTCTTCCTTCTCGACGGGGACTCGTTGGGCTTTGCGTAATGGCA
AATGGACCTTTGGTGTGGACTCAGCCGCAGAGCTTAGCCGTGCAACCAGC
AAATATACGTTGGAAGGGATCAGTCATGATATCGTGACGCCGTGTCTTAT
TGTTGACGCGGAAAACGACCACTTTCTAAAGGGCCAACCGGAATTGCTGA
GAAGGAATTTAAGCTGTGAATGTGAACTTGTTAGTCTGGGGGCTGAAGAG
GGCGGAGACACGCATTGCCACCAAGGGGCCTTCTTTCGCCTGCATCAGGT
GGTATTTGATTTTTTGGAGTCCCGGCTACATCCGGAAAGGAAAGTCTAGT
CTTCCACCCAAGACGTTATATCTTTTGCCTACCTGTTTTTGATTTGTCTG
TGCCTCCCCTTAGTTTCCAATTATGAGTAGCATGGCTAATATAGTATGAG
CGCTGTCCGAATATAAAATACATTGTTTATAATTATTGTATGACAAAGAA
GCTAAATATGCAG
back to top

Coding sequence (CDS) from alignment at KZ851902.1:870989..872451+

>M747DRAFT_292818-T1 ID=M747DRAFT_292818-T1|Name=M747DRAFT_292818-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1221bp|location=Sequence derived from alignment at KZ851902.1:870989..872451+ (Aspergillus niger ATCC 13496)
ATGCTTCTTAATCACTTTTTCAAATCCAACGGGTCCTTCAGCTATGAAGC
ACTCCGGGCCGCTGGCTACAGCAATTACGGTGGTGCAGATCTTGGGGAAG
TGATAGCAATATGTTCCAAAATCCGGCCTGGAAATGAAGAAGACTGGGTC
CGCGAGTGGCGGAATGCCGCAGAGCGAGCAGTTTCCAACGCAGACCACTC
GAAAACAGCCAAAAACAGTGAAAGTGCCTACCATGGATACCTTCGTGCAT
CAAATTACTTCCGAACGGCGGAATTCTACCGCCGAGAAAATGTCAATGAA
GATGAAATATCACAGTCTCTCTTTGAAAGCTCCGAAAGTTCGTTTGTCAA
GGCGATGGAGGTTTCGGAGTTTTGCTATGAGCCGATTAGTATTCCTTACG
AGGAGACATCTTTACCAGGATATTTTGTACGATTTGACAGGACAGACAAG
CCACTACGCACGATTATCTTCAATGGCGGGTTTGACTCAACGGCGAGCGA
GGGATGGTTTGCAATTGGGGCAGCGGCTCTGGCTAGGGGGTATAACTTCC
TCGCCTTCGATGGTCCCGGACAGGGTGCGGCGATCCGAAGCCAAGGGATG
CACTTTCGACACGATTGGGAGAAGGTGCTCACGCCTGTTGTGAACTATGC
TATATCTCGCCCAGAAATCAACGCTAATGGCATAGTTCTCTTCGGATGGA
GCATGGGTGGGTACTTAGTGGCTAGGGCGGCTACGCAGGAACATCGCGCG
GCTGCGATCGTGCTCGATGATGGCGTGTATGATTTTGGTTCTGCATTTCG
AAATGCGCAGCCACTTCTCGTCCAGAAGCTCGTGGAGCGGAAATATGACG
CTGTGCCCAATTTGCTATTTGAGTTCGTGTCTTCCTTCTCGACGGGGACT
CGTTGGGCTTTGCGTAATGGCAAATGGACCTTTGGTGTGGACTCAGCCGC
AGAGCTTAGCCGTGCAACCAGCAAATATACGTTGGAAGGGATCAGTCATG
ATATCGTGACGCCGTGTCTTATTGTTGACGCGGAAAACGACCACTTTCTA
AAGGGCCAACCGGAATTGCTGAGAAGGAATTTAAGCTGTGAATGTGAACT
TGTTAGTCTGGGGGCTGAAGAGGGCGGAGACACGCATTGCCACCAAGGGG
CCTTCTTTCGCCTGCATCAGGTGGTATTTGATTTTTTGGAGTCCCGGCTA
CATCCGGAAAGGAAAGTCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_292818M747DRAFT_292818Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292818-T1.utr5p1M747DRAFT_292818-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292818-T1.exon1M747DRAFT_292818-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292818-T1.cdsM747DRAFT_292818-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292818-T1.utr3p1M747DRAFT_292818-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292818-T1M747DRAFT_292818-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteMEROPS:MER0037839
DBxrefInterPro:IPR000073
DBxrefInterPro:IPR029058
DBxrefPFAM:PF12146
DBxrefPFAM:PF06500
DBxrefPFAM:PF12697
Productalpha/beta-hydrolase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851902.1supercontigKZ851902.1:870989..872451 +
Powered by Drupal