You are here

Home

M747DRAFT_293027-T1, M747DRAFT_293027-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_293027-T1
Unique NameM747DRAFT_293027-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851903.1:555734..556824+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_293027-T1 ID=M747DRAFT_293027-T1|Name=M747DRAFT_293027-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1091bp|location=Sequence derived from alignment at KZ851903.1:555734..556824+ (Aspergillus niger ATCC 13496)
AGACTGAAGCCGGAGGAAACGACCGTCTGAGGGAAACTGGTCTTGTGCTG
TCAAATTTCTTGCGCTCGCTGTATATTTATTTACTATCATTCAACATGCC
CGTCGTTGCTGGTCCCCCCCAAGGGCATGGTCCCTCTACCTTTGAGAAGA
GTTAGTTAAACGGATCCCATGCCATTCACCAGCTGGATGAGTTTCGCCCT
CAGTCTGCCGTACGGATCAACTAACATGTTTTACAGTGAAGATGGGTGCC
ATGATGGGATCCAGTAGGTTAAAGAAGTGTGCAAGCTGATTAATACGGTA
CTAATCATTCCCAACAGCTGTTGGAGGTATCATGGGCTTCATCATCGGTT
CGTCTATGCAAACGTAACCCCTCCTCCGAACCCGACTAATATGGAGCAGG
AACTGTCACCATCTTCCAGTACGGGGCTGGACCTAACGGTGTTATGCGTA
CCCTGGGTAAATATATGCTTGGTTCTGGTGCTACTTTTGGGTACGTTCTG
CGCAATTCCTTGCGATTCTATGTCTATTTATCGGTTCTGTATGTTCGACT
GGATAATACTAATCATACTCTTTTGATAGTCTCTTCATGTCCATCGGCAG
CGTTATTCGTACCGAAGGCCCTCACAACGATGCCTGGCTCCGCGCTCGCG
GACCCCCGATGATGCTCCCCCGTCAGAGCCCTCTGCGCCCTATGCGCGAC
TAAATATTTGATGAGATGATGGAATTATACCAATTGAGGGATGTGAGCTT
TGCGAGGTGGAGGAAGACTGTACGATAGCGTATCCTGAAACATGGAGCAA
GGAATGACAAGTTAATCGCCGAGACGTCAAGACAGAGCAGAGCAGCAGTG
ACAGTATCATGTACATATCGAAGGGCAACTCAACCCTGTCCGCTAGTCAC
CCATGCGTTGCAATGTATTGAACGTCCTGGCATGATTGGGTTAATCATAA
TGGAAGTCATGAATGATGCATGCTATAGCAAGTGCTGGTATATTCATCAC
TATAGTGGTCATCTACATCGCAGCTTCACCTTAGTGAAGTATCATACTAC
TTACTGGCCATTCACACCCATGGCACTCTGCAAACAAGCAC
back to top

Coding sequence (CDS) from alignment at KZ851903.1:555734..556824+

>M747DRAFT_293027-T1 ID=M747DRAFT_293027-T1|Name=M747DRAFT_293027-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1635bp|location=Sequence derived from alignment at KZ851903.1:555734..556824+ (Aspergillus niger ATCC 13496)
ATGCCCGTCGTTGCTGGTCCCCCCCAAGGGCATGGTCCCTCTACCTTTGA
GAAGATGAAGATGGGTGCCATGATGGGATCCACTGTTGGAGGTATCATGG
GCTTCATCATCGGAACTGTCACCATCTTCCAGTACGGGGCTGGACCTAAC
GGTGTTATGCGTACCCTGGGTAAATATATGCTTGGTTCTGGTGCTACTTT
TGGTCTCTTCATGTCCATCGGCAGCGTTATTCGTACCGAAGGCCCTCACA
ACGATGCCTGGCTCCGCGCTCGCGGACCCCCGATGATGCTCCCCCGTCAG
AGCCCTCTGCGCCCTATGCGCGACTAAATGCCCGTCGTTGCTGGTCCCCC
CCAAGGGCATGGTCCCTCTACCTTTGAGAAGATGAAGATGGGTGCCATGA
TGGGATCCACTGTTGGAGGTATCATGGGCTTCATCATCGGAACTGTCACC
ATCTTCCAGTACGGGGCTGGACCTAACGGTGTTATGCGTACCCTGGGTAA
ATATATGCTTGGTTCTGGTGCTACTTTTGGTCTCTTCATGTCCATCGGCA
GCGTTATTCGTACCGAAGGCCCTCACAACGATGCCTGGCTCCGCGCTCGC
GGACCCCCGATGATGCTCCCCCGTCAGAGCCCTCTGCGCCCTATGCGCGA
CTAAATGCCCGTCGTTGCTGGTCCCCCCCAAGGGCATGGTCCCTCTACCT
TTGAGAAGATGAAGATGGGTGCCATGATGGGATCCACTGTTGGAGGTATC
ATGGGCTTCATCATCGGAACTGTCACCATCTTCCAGTACGGGGCTGGACC
TAACGGTGTTATGCGTACCCTGGGTAAATATATGCTTGGTTCTGGTGCTA
CTTTTGGTCTCTTCATGTCCATCGGCAGCGTTATTCGTACCGAAGGCCCT
CACAACGATGCCTGGCTCCGCGCTCGCGGACCCCCGATGATGCTCCCCCG
TCAGAGCCCTCTGCGCCCTATGCGCGACTAAATGCCCGTCGTTGCTGGTC
CCCCCCAAGGGCATGGTCCCTCTACCTTTGAGAAGATGAAGATGGGTGCC
ATGATGGGATCCACTGTTGGAGGTATCATGGGCTTCATCATCGGAACTGT
CACCATCTTCCAGTACGGGGCTGGACCTAACGGTGTTATGCGTACCCTGG
GTAAATATATGCTTGGTTCTGGTGCTACTTTTGGTCTCTTCATGTCCATC
GGCAGCGTTATTCGTACCGAAGGCCCTCACAACGATGCCTGGCTCCGCGC
TCGCGGACCCCCGATGATGCTCCCCCGTCAGAGCCCTCTGCGCCCTATGC
GCGACTAAATGCCCGTCGTTGCTGGTCCCCCCCAAGGGCATGGTCCCTCT
ACCTTTGAGAAGATGAAGATGGGTGCCATGATGGGATCCACTGTTGGAGG
TATCATGGGCTTCATCATCGGAACTGTCACCATCTTCCAGTACGGGGCTG
GACCTAACGGTGTTATGCGTACCCTGGGTAAATATATGCTTGGTTCTGGT
GCTACTTTTGGTCTCTTCATGTCCATCGGCAGCGTTATTCGTACCGAAGG
CCCTCACAACGATGCCTGGCTCCGCGCTCGCGGACCCCCGATGATGCTCC
CCCGTCAGAGCCCTCTGCGCCCTATGCGCGACTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_293027M747DRAFT_293027Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293027-T1M747DRAFT_293027-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293027-T1.utr5p1M747DRAFT_293027-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293027-T1.exon1M747DRAFT_293027-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_293027-T1.exon2M747DRAFT_293027-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_293027-T1.exon3M747DRAFT_293027-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_293027-T1.exon4M747DRAFT_293027-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_293027-T1.exon5M747DRAFT_293027-T1.exon5Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293027-T1.cdsM747DRAFT_293027-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293027-T1.utr3p1M747DRAFT_293027-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09265KNL
DBxrefInterPro:IPR018450
DBxrefPFAM:PF10247
Productmitochondrial genome maintenance protein Mgr2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851903.1supercontigKZ851903.1:555734..556824 +
Powered by Drupal