|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851903.1:671940..672677- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_293071-T1 ID=M747DRAFT_293071-T1|Name=M747DRAFT_293071-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=738bp|location=Sequence derived from alignment at KZ851903.1:671940..672677- (Aspergillus niger ATCC 13496)
TACTTAGATACTATCGCTGGAGTCTATTTGGTTTGAGTTCACGGTCAATT
GAGCTGCCTGCTACACTTAAGTGCGGCACTACGCTCACATCTGCATTACA
CACCTGAATCCCATTCAAATACAACCACAACACAATCATCAAAAATGCCC
GCACACCTGGGCCACGAGGAGGTACTTCACCTCCACAACCACAACAACAC
CCCCAAAACCAATACTGACCAAACGAACTAGTTCTTCACCTCCCTCACCA
CCCTCCTAAGCACCACATCCCAAAAAACCCGCGGATCCGTGTACCTCACC
CAGAAGCCTCTCCTCGACTCTACCAACACCCAGTCCCAACCATCCATTCT
CATCCGCGCGACAGACGGCAACACCAACGCCCCGAACCCCAAGACGGCAG
AGGCCAAGAAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTGAAGATC
TCGACGGTCGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCGGTATGC
GGAGGTGTGTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATCGGAAGA
AGGGCAAGGCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAGGGGTGA
TTTATTGTTTCTTTTGGGGGAGGGGTGGTGTGATGCATTATGGGCGTTAG
TGGGATGATTTTATTCTATTATACGTACTTTTATTTGTTATATGGGAACA
TTATGCTTCGATGTATATGTGTTGAGTAGATAGGTTGA back to topCoding sequence (CDS) from alignment at KZ851903.1:671940..672677- >M747DRAFT_293071-T1 ID=M747DRAFT_293071-T1|Name=M747DRAFT_293071-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=792bp|location=Sequence derived from alignment at KZ851903.1:671940..672677- (Aspergillus niger ATCC 13496)
TTCTTCACCTCCCTCACCACCCTCCTAAGCACCACATCCCAAAAAACCCG
CGGATCCGTGTACCTCACCCAGAAGCCTCTCCTCGACTCTACCAACACCC
AGTCCCAACCATCCATTCTCATCCGCGCGACAGACGGCAACACCAACGCC
CCGAACCCCAAGACGGCAGAGGCCAAGAAGAAGGTGTCGAAGGCGACAGC
AGCATCGAAAGTGAAGATCTCGACGGTCGTGAGCCCTGATGACCTGGAGG
CGTTCTATGCGCGGTATGCGGAGGTGTGTAAGGCTGGGATGACGGGGTTG
AAGAAGAGGGATCGGAAGAAGGGCAAGGCGAAGGGGAAGAAGGAGGGTGG
GAAGGTTGTTAAGGGGTGAATGCCCGCACACCTGGGCCACGAGGAGTTCT
TCACCTCCCTCACCACCCTCCTAAGCACCACATCCCAAAAAACCCGCGGA
TCCGTGTACCTCACCCAGAAGCCTCTCCTCGACTCTACCAACACCCAGTC
CCAACCATCCATTCTCATCCGCGCGACAGACGGCAACACCAACGCCCCGA
ACCCCAAGACGGCAGAGGCCAAGAAGAAGGTGTCGAAGGCGACAGCAGCA
TCGAAAGTGAAGATCTCGACGGTCGTGAGCCCTGATGACCTGGAGGCGTT
CTATGCGCGGTATGCGGAGGTGTGTAAGGCTGGGATGACGGGGTTGAAGA
AGAGGGATCGGAAGAAGGGCAAGGCGAAGGGGAAGAAGGAGGGTGGGAAG
GTTGTTAAGGGGTGAATGCCCGCACACCTGGGCCACGAGGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005786 | signal recognition particle, endoplasmic reticulum targeting |
| GO:0048500 | signal recognition particle |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030942 | endoplasmic reticulum signal peptide binding |
| GO:0008312 | 7S RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003210 |
| DBxref | InterPro:IPR009018 |
| DBxref | PFAM:PF02290 |
| Product | SRP9/SRP14 subunit |
| Product | signal recognition particle |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851903.1 | supercontig | KZ851903.1:671940..672677 - |
|
