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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851903.1:747169..748993+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_293092-T1 ID=M747DRAFT_293092-T1|Name=M747DRAFT_293092-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1825bp|location=Sequence derived from alignment at KZ851903.1:747169..748993+ (Aspergillus niger ATCC 13496)
CCGACAACGTCCAAGGCGCAGGCTGCTGGCTGATCTCTCCTCCTTCATAC
AATTAGCAGTCTCAAATTCTACTTCCCATCAAATCATCCCGACTAGGGCC
ACAGCAGCCATGGCTGCCCCCGTCCTCCCTCTGCAGCAGGTCAAGCTGCC
GGCGCTGCCCTCGACCCGTTTGACGCCGGAGCAGCAATATTGGAAAACAT
TCAAGAATCCTCTCCTCATCCCCTCGCCAGCCAATGGCCCCGTCAACCTC
ATCACGCAACCCTCCGCTCCCTCCTCTGCCTCCGCCTTCCCTTCCCTCAC
CCAACCCCCCGATGTGTTCACCGTGACCACCGGCGCCCGCGTCCAGATCT
ACTCCATCCGCACTCGCAAACTCCTCCGCACAATCACCCGCTTCGATGAT
ACGGTACGAGGCACAGATGTCCGTCCCGACGGGCGAGTCATCGCCGTTGG
TGACGACTCTGGTACGGTGCAGGTGTTCGACGTGAGCTCCCGTGCCATCT
TGAAGACATGGAAGGATCACAAGCAGCCCGTCTGGGTCACGAAATTCTCT
CCCAGCGACCCTACATGCGTCATGACCGCCAGTGACGATCGGACGGTACG
ACTGTGGGATCTGCCCAGCGAGAACAGCCAGAAGGTCTTCACTGGCCATA
CCGATTACGTGCGCAGCGGTGCATTTATGCCGGGGTCTCTGGCCTCCTCC
GGCCTGGTGGTCTCTGGTAGTTACGACCGGACCGTGCGACTGTGGGATCC
TCGCGTTGAAAACCGGTCCGCCATGACATTCAAGATGGGCGCAGCGATTG
AGACGGTGCTCCCCATGCCCACGGGCACGACGGTGCTTGCGGCGGCCGAC
AACAAGATCGCGGTGCTGGATATCGTGGCCGGTAAGCCCCTGCACATGAT
TCAGAGCCACCAAAAGACCGTCACGTCGCTGGCGCTGGCGTCGAACGGCG
AGCGCCTGCTCTCCGGTGCGCTGGACGGCCACATGAAGGTATTCGAAACG
ACCGGCTGGAACATGGTCTCGGGCTCCAAGTACCCGTCCCCCATTCTCTC
CCTTCGCGCGATCACATCGGGCATCGCCCAGGAGGACAAGCACATTGCCG
TTGGTATGCAGTCTGGTCTTCTGTCGATCAAGACCCGCCTGTCCGGACAA
CAGAAGATCCGTGAGCGCGAGCGCCGCAAGGAGATGCAGGCGCTGCTGGA
AGGCAAGCTGGAAGAGCACGACCGGAAGGCGGCCAAGCAAAAGAAGCAGC
GCGGATCCGGATGGGAGAAGCGCCTGCGCGGACAGGACTTTGTCGGTGAG
GGCGTGGACATTGTGATCGAGGGGCGGGACCTCAAGAAGCGGAAGAAGGA
GCAACCGTGGGAACTCGACCTGCGCAAGGCGAAGTACTCGGCGGCCCTGG
ACCAGGTGCTGCGGTCGAACGACAAGACAGCACAATTGACGCTATTGACG
GCGCTGCGGCATCGGTCCGCGCTGCGGGCGTCCCTGCAGAATCGCGACGA
GGTGACGCTGCAGCCGGTGCTGCAATGGGTGCACAAGAACATCACGGAGC
CGCGACTGGTGCAGCTGAGTGTGGAGGTGGCGATGAACGTGCTGGATATC
TACTCGGGCAACCTGGGCCAGTCGGCGCAGATCGACAAGATGGTGGAGCG
ACTGCACCGGCGAGTGCGCGACGAGGTGGAGATGGCGCATCAAGCGTACC
AGACGAAGGGAATGTTGGAGATGCTTGCTGCATGAGCAGAGAGCATAACA
GATAACAGACCAAAACAAAACCAAAAAAGCATGACTGTTAAAGTACTATA
GTTACTACTATTGGATACCTGGATG back to topCoding sequence (CDS) from alignment at KZ851903.1:747169..748993+ >M747DRAFT_293092-T1 ID=M747DRAFT_293092-T1|Name=M747DRAFT_293092-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1626bp|location=Sequence derived from alignment at KZ851903.1:747169..748993+ (Aspergillus niger ATCC 13496)
ATGGCTGCCCCCGTCCTCCCTCTGCAGCAGGTCAAGCTGCCGGCGCTGCC
CTCGACCCGTTTGACGCCGGAGCAGCAATATTGGAAAACATTCAAGAATC
CTCTCCTCATCCCCTCGCCAGCCAATGGCCCCGTCAACCTCATCACGCAA
CCCTCCGCTCCCTCCTCTGCCTCCGCCTTCCCTTCCCTCACCCAACCCCC
CGATGTGTTCACCGTGACCACCGGCGCCCGCGTCCAGATCTACTCCATCC
GCACTCGCAAACTCCTCCGCACAATCACCCGCTTCGATGATACGGTACGA
GGCACAGATGTCCGTCCCGACGGGCGAGTCATCGCCGTTGGTGACGACTC
TGGTACGGTGCAGGTGTTCGACGTGAGCTCCCGTGCCATCTTGAAGACAT
GGAAGGATCACAAGCAGCCCGTCTGGGTCACGAAATTCTCTCCCAGCGAC
CCTACATGCGTCATGACCGCCAGTGACGATCGGACGGTACGACTGTGGGA
TCTGCCCAGCGAGAACAGCCAGAAGGTCTTCACTGGCCATACCGATTACG
TGCGCAGCGGTGCATTTATGCCGGGGTCTCTGGCCTCCTCCGGCCTGGTG
GTCTCTGGTAGTTACGACCGGACCGTGCGACTGTGGGATCCTCGCGTTGA
AAACCGGTCCGCCATGACATTCAAGATGGGCGCAGCGATTGAGACGGTGC
TCCCCATGCCCACGGGCACGACGGTGCTTGCGGCGGCCGACAACAAGATC
GCGGTGCTGGATATCGTGGCCGGTAAGCCCCTGCACATGATTCAGAGCCA
CCAAAAGACCGTCACGTCGCTGGCGCTGGCGTCGAACGGCGAGCGCCTGC
TCTCCGGTGCGCTGGACGGCCACATGAAGGTATTCGAAACGACCGGCTGG
AACATGGTCTCGGGCTCCAAGTACCCGTCCCCCATTCTCTCCCTTCGCGC
GATCACATCGGGCATCGCCCAGGAGGACAAGCACATTGCCGTTGGTATGC
AGTCTGGTCTTCTGTCGATCAAGACCCGCCTGTCCGGACAACAGAAGATC
CGTGAGCGCGAGCGCCGCAAGGAGATGCAGGCGCTGCTGGAAGGCAAGCT
GGAAGAGCACGACCGGAAGGCGGCCAAGCAAAAGAAGCAGCGCGGATCCG
GATGGGAGAAGCGCCTGCGCGGACAGGACTTTGTCGGTGAGGGCGTGGAC
ATTGTGATCGAGGGGCGGGACCTCAAGAAGCGGAAGAAGGAGCAACCGTG
GGAACTCGACCTGCGCAAGGCGAAGTACTCGGCGGCCCTGGACCAGGTGC
TGCGGTCGAACGACAAGACAGCACAATTGACGCTATTGACGGCGCTGCGG
CATCGGTCCGCGCTGCGGGCGTCCCTGCAGAATCGCGACGAGGTGACGCT
GCAGCCGGTGCTGCAATGGGTGCACAAGAACATCACGGAGCCGCGACTGG
TGCAGCTGAGTGTGGAGGTGGCGATGAACGTGCTGGATATCTACTCGGGC
AACCTGGGCCAGTCGGCGCAGATCGACAAGATGGTGGAGCGACTGCACCG
GCGAGTGCGCGACGAGGTGGAGATGGCGCATCAAGCGTACCAGACGAAGG
GAATGTTGGAGATGCTTGCTGCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005730 | nucleolus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006364 | rRNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261MMR |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR018983 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF09384 |
| Product | WD40 repeat-like protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851903.1 | supercontig | KZ851903.1:747169..748993 + |
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