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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851903.1:1012133..1014031+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_293167-T1 ID=M747DRAFT_293167-T1|Name=M747DRAFT_293167-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1899bp|location=Sequence derived from alignment at KZ851903.1:1012133..1014031+ (Aspergillus niger ATCC 13496)
AACCCACTCACCTACGTTTCCAATACATACTGAAGAACAGGCAGCAGTGA
TACTGGGCTATAAAGGGGGCATCTGTCTACTGCATTTCAACTCTTCAATC
CTGCAGCTTCATCCCAACACAGCTTCTGTTCCATATCTGCTTTCATTCAC
ACGATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAGATCTA
TGTCCCAGCCCAGGTAATGCAATCCTTCATCTCCTAGGAGTCTGTCTGAT
TGCCTGATCAAACAGTGTCTGGATCAAATCCTCTTCGAGAAACACCAAGG
TGTCTCAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAATT
ACTGCACCGATAGAGAGGGTATGTTCTAATCAAAATACACCATCCTGTCT
TTTCAAGTACTGAGAATTCCAACTAACCAACCGTTCAGATGTTTGCTCTC
TAGCACTAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCC
AACTCCATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGC
CAAGTCCATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACA
CAAGCATTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGAACTAAT
GCTCTCTTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCG
AGACGCCATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCA
GTCGTCCTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAAC
GCGCTCCTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGACACACAC
GTACGACTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATG
GCCATGAATCAATCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAG
GACCTCCTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCT
CGACCTCTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCA
GCAAGTCGTACGGTCGACTCAAATATGACGACCTTCTACACCAGTCGAGC
TCGAACCCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCT
GACCTACGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAG
CTCTGACAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCG
CCCTCTTTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTCACTCAT
CAGCTTGATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTG
GCATGTTTAGTGTAAGTCACACCCATGTCCCCAAATTGAACTATATATCC
ATCAGTTCTAACGCATATTGTGGATAAAGTACGGCAGCGGTCTAGCCAGC
ACTCTCTTCGCCTTCAAAGTAACCGGCGACCTAAACCCCATGGTTGAGAA
AATCGATCTCATGAACCGCCTGAATCAGAGACATATCGCTACGCCCGAGG
AATATGAAGAGGTAAGCCAACAGAATTATGTAGCTTTCTCGATCCTTTGG
TGATCAAGTTGTTGCTCTATACTGATACAGTGTATATCAAGGCCTGTACA
CTCCGACTGAAAGCCTACGGAAGCAATGACTATACTCCATCTGGAGACAT
AGCCTCCCTAGCACCGGGAACATACTACTTGGAGAAAATTGATGAGGTGT
ATCGGCGGACTTATGCTATCAAATCTTGATCTCGAGGTCATTAATTTGAG
GGAGTGATTCTTTTCTGTTGCTGTGCTATTGAATTAATGGTGTCTTTCTT
TCGCAAAATAATTTTCCCTACCTCATTCCATGGAAACTTCTTCAGAGGC back to topCoding sequence (CDS) from alignment at KZ851903.1:1012133..1014031+ >M747DRAFT_293167-T1 ID=M747DRAFT_293167-T1|Name=M747DRAFT_293167-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6780bp|location=Sequence derived from alignment at KZ851903.1:1012133..1014031+ (Aspergillus niger ATCC 13496)
ATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAGATCTATGT
CCCAGCCCAGTGTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGTCT
CAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAATTACTGC
ACCGATAGAGAGGATGTTTGCTCTCTAGCACTAACAGCCGTGTCCTCCCT
CCTCAGGAAATACAGCATTGACCCCAACTCCATCGGTCGTCTCGAAGTAG
GCACGGAATCCCTGATCGACAAGGCCAAGTCCATCAAGTCCGTTCTTACA
ACCCTCTTCGAGCCTTCCGGCAACACAAGCATTGAAGGTATTGACACTAT
TCACGCCTGCTACGGCGGAACTAATGCTCTCTTCAACGCTATAAACTGGG
TCGAGTCCCGGTCCTGGGACGGGCGAGACGCCATCGTCGTAGCATCCGAC
ATTGCCCTCTACAAAGAGTCTTCCAGTCGTCCTACCGGTGGTGCAGGTTG
CGTTGCCATGCTCGTGGGCCCCAACGCGCTCCTCTCCCTGGACCATAGCA
TTAGAGGAGTCTATATGACACACACGTACGACTTCTACAAACCAGACCTC
AAATCAGAGTTCCCTCTCGTCAATGGCCATGAATCAATCACTTGCTATAT
CCGCGCCCTGGACGGATGCCACAAGGACCTCCTCCGTCGCAGAAGCGCGA
ACAACAAGAACGTCGAGAATGTCCTCGACCTCTTCGACTACATGGCCTTC
CATACTCCAAACTGCAAGCTAGTCAGCAAGTCGTACGGTCGACTCAAATA
TGACGACCTTCTACACCAGTCGAGCTCGAACCCAGACACAGATCTGACTG
CAATCCCACCTGAGCTCCGCACCCTGACCTACGAAGAATCCCTCAAAGAC
AAAAATCTAGAGAAGACCCTTGTAGCTCTGACAAAAGATCAGTTCAAGAA
ACGGGTCGAGCCATGCATCGCTGCGCCCTCTTTGTGTGGAAATATGTACA
CAGGCAGTCTCTATTGCTCACTCATCAGCTTGATCAGTAATATCGATCTT
GCCACTGCGGAGGGGAAAACTATTGGCATGTTTAGTTACGGCAGCGGTCT
AGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGACCTAAACCCCATGG
TTGAGAAAATCGATCTCATGAACCGCCTGAATCAGAGACATATCGCTACG
CCCGAGGAATATGAAGAGGCCTGTACACTCCGACTGAAAGCCTACGGAAG
CAATGACTATACTCCATCTGGAGACATAGCCTCCCTAGCACCGGGAACAT
ACTACTTGGAGAAAATTGATGAGGTGTATCGGCGGACTTATGCTATCAAA
TCTTGAATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAGAT
CTATGTCCCAGCCCAGTGTCTGGATCAAATCCTCTTCGAGAAACACCAAG
GTGTCTCAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAAT
TACTGCACCGATAGAGAGGATGTTTGCTCTCTAGCACTAACAGCCGTGTC
CTCCCTCCTCAGGAAATACAGCATTGACCCCAACTCCATCGGTCGTCTCG
AAGTAGGCACGGAATCCCTGATCGACAAGGCCAAGTCCATCAAGTCCGTT
CTTACAACCCTCTTCGAGCCTTCCGGCAACACAAGCATTGAAGGTATTGA
CACTATTCACGCCTGCTACGGCGGAACTAATGCTCTCTTCAACGCTATAA
ACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGACGCCATCGTCGTAGCA
TCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCGTCCTACCGGTGGTGC
AGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGCTCCTCTCCCTGGACC
ATAGCATTAGAGGAGTCTATATGACACACACGTACGACTTCTACAAACCA
GACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCATGAATCAATCACTTG
CTATATCCGCGCCCTGGACGGATGCCACAAGGACCTCCTCCGTCGCAGAA
GCGCGAACAACAAGAACGTCGAGAATGTCCTCGACCTCTTCGACTACATG
GCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAAGTCGTACGGTCGACT
CAAATATGACGACCTTCTACACCAGTCGAGCTCGAACCCAGACACAGATC
TGACTGCAATCCCACCTGAGCTCCGCACCCTGACCTACGAAGAATCCCTC
AAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCTGACAAAAGATCAGTT
CAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCTCTTTGTGTGGAAATA
TGTACACAGGCAGTCTCTATTGCTCACTCATCAGCTTGATCAGTAATATC
GATCTTGCCACTGCGGAGGGGAAAACTATTGGCATGTTTAGTTACGGCAG
CGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGACCTAAACC
CCATGGTTGAGAAAATCGATCTCATGAACCGCCTGAATCAGAGACATATC
GCTACGCCCGAGGAATATGAAGAGGCCTGTACACTCCGACTGAAAGCCTA
CGGAAGCAATGACTATACTCCATCTGGAGACATAGCCTCCCTAGCACCGG
GAACATACTACTTGGAGAAAATTGATGAGGTGTATCGGCGGACTTATGCT
ATCAAATCTTGAATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCAT
GGAGATCTATGTCCCAGCCCAGTGTCTGGATCAAATCCTCTTCGAGAAAC
ACCAAGGTGTCTCAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGC
ATGAATTACTGCACCGATAGAGAGGATGTTTGCTCTCTAGCACTAACAGC
CGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCAACTCCATCGGTC
GTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCCAAGTCCATCAAG
TCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACACAAGCATTGAAGG
TATTGACACTATTCACGCCTGCTACGGCGGAACTAATGCTCTCTTCAACG
CTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGACGCCATCGTC
GTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCGTCCTACCGG
TGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGCTCCTCTCCC
TGGACCATAGCATTAGAGGAGTCTATATGACACACACGTACGACTTCTAC
AAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCATGAATCAAT
CACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGGACCTCCTCCGTC
GCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTCGACCTCTTCGAC
TACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAAGTCGTACGG
TCGACTCAAATATGACGACCTTCTACACCAGTCGAGCTCGAACCCAGACA
CAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTGACCTACGAAGAA
TCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCTGACAAAAGA
TCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCTCTTTGTGTG
GAAATATGTACACAGGCAGTCTCTATTGCTCACTCATCAGCTTGATCAGT
AATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGGCATGTTTAGTTA
CGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGACC
TAAACCCCATGGTTGAGAAAATCGATCTCATGAACCGCCTGAATCAGAGA
CATATCGCTACGCCCGAGGAATATGAAGAGGCCTGTACACTCCGACTGAA
AGCCTACGGAAGCAATGACTATACTCCATCTGGAGACATAGCCTCCCTAG
CACCGGGAACATACTACTTGGAGAAAATTGATGAGGTGTATCGGCGGACT
TATGCTATCAAATCTTGAATGGCATCTTACCCAGAGAATGTCGGCATTAA
GGCCATGGAGATCTATGTCCCAGCCCAGTGTCTGGATCAAATCCTCTTCG
AGAAACACCAAGGTGTCTCAGCCGGCAAGTACACCATCGGACTGGGACTC
AAGTGCATGAATTACTGCACCGATAGAGAGGATGTTTGCTCTCTAGCACT
AACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCAACTCCA
TCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCCAAGTCC
ATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACACAAGCAT
TGAAGGTATTGACACTATTCACGCCTGCTACGGCGGAACTAATGCTCTCT
TCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGACGCC
ATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCGTCC
TACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGCTCC
TCTCCCTGGACCATAGCATTAGAGGAGTCTATATGACACACACGTACGAC
TTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCATGA
ATCAATCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGGACCTCC
TCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTCGACCTC
TTCGACTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAAGTC
GTACGGTCGACTCAAATATGACGACCTTCTACACCAGTCGAGCTCGAACC
CAGACACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTGACCTAC
GAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCTGAC
AAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCTCTT
TGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTCACTCATCAGCTTG
ATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGGCATGTT
TAGTTACGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCG
GCGACCTAAACCCCATGGTTGAGAAAATCGATCTCATGAACCGCCTGAAT
CAGAGACATATCGCTACGCCCGAGGAATATGAAGAGGCCTGTACACTCCG
ACTGAAAGCCTACGGAAGCAATGACTATACTCCATCTGGAGACATAGCCT
CCCTAGCACCGGGAACATACTACTTGGAGAAAATTGATGAGGTGTATCGG
CGGACTTATGCTATCAAATCTTGAATGGCATCTTACCCAGAGAATGTCGG
CATTAAGGCCATGGAGATCTATGTCCCAGCCCAGTGTCTGGATCAAATCC
TCTTCGAGAAACACCAAGGTGTCTCAGCCGGCAAGTACACCATCGGACTG
GGACTCAAGTGCATGAATTACTGCACCGATAGAGAGGATGTTTGCTCTCT
AGCACTAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCA
ACTCCATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCC
AAGTCCATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACAC
AAGCATTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGAACTAATG
CTCTCTTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGA
GACGCCATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAG
TCGTCCTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACG
CGCTCCTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGACACACACG
TACGACTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGG
CCATGAATCAATCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGG
ACCTCCTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTC
GACCTCTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAG
CAAGTCGTACGGTCGACTCAAATATGACGACCTTCTACACCAGTCGAGCT
CGAACCCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTG
ACCTACGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGC
TCTGACAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGC
CCTCTTTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTCACTCATC
AGCTTGATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGG
CATGTTTAGTTACGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAG
TAACCGGCGACCTAAACCCCATGGTTGAGAAAATCGATCTCATGAACCGC
CTGAATCAGAGACATATCGCTACGCCCGAGGAATATGAAGAGGCCTGTAC
ACTCCGACTGAAAGCCTACGGAAGCAATGACTATACTCCATCTGGAGACA
TAGCCTCCCTAGCACCGGGAACATACTACTTGGAGAAAATTGATGAGGTG
TATCGGCGGACTTATGCTATCAAATCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008299 | isoprenoid biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0003824 | catalytic activity |
| GO:0004421 | hydroxymethylglutaryl-CoA synthase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013746 |
| DBxref | InterPro:IPR016039 |
| DBxref | InterPro:IPR010122 |
| DBxref | InterPro:IPR013528 |
| DBxref | PFAM:PF01154 |
| DBxref | PFAM:PF08540 |
| Product | hydroxymethylglutaryl-CoA synthase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851903.1 | supercontig | KZ851903.1:1012133..1014031 + |
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