You are here

Home

M747DRAFT_293307-T1, M747DRAFT_293307-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_293307-T1
Unique NameM747DRAFT_293307-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:369678..371780-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_293307-T1 ID=M747DRAFT_293307-T1|Name=M747DRAFT_293307-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2103bp|location=Sequence derived from alignment at KZ851904.1:369678..371780- (Aspergillus niger ATCC 13496)
TTTTGCTGGGGATAAATAGAAAGATATCGTCACATTCCATTGCTTTTCCC
AGCCGGTCTGTTGACTTTCAAGTTCTTTTTCTATCTCCAAAGGGGGGAAG
GGATACTTCAGTCCTTGCACTATCATTCCTATTCATGAGTACATGAACGA
TTCGACGATATTTCAAACTGTTTTGTTTTTTTGTTTTCATGAGTTTATGA
TTTAACGAAGCAAAGGAATCAAACACGAACTACGACCCAAAATAATCTGG
AAACTGGAAACACAATGTCTCTGAATCCATCTGACGCAAGGGGCGTCAAC
TCGACCGCGGGTGAAGAAACTCAACAATATGTAACTTTACTACCGGCTCA
GAATCAAGTCGATGAGCAGCACCAACAGCACGTTGTCTATTCGGAGCAGA
CGCCGCTGCTTCGGTCGGGACTTGGTCATGAGTCTGCTTCTGCTTCTTCA
GCAATGCATCACTATTCATCTCAGCCCTGGTGGAAGACGGCGCAGCAGGT
AGCCTGCGATGTCTGGCTGCAGGGCAAGGGCATGATCCTGGTCATGTTCT
CGCAATTCTTTGGCGCGTCGATGAATGTCATGACGCAGTTTTTGGAAATC
AAAGGTCGTGATGGGAAGGGGTTTCATCCGTTTCAGGTGCGTTCTATATC
GCCTACCTATCTTTCTGCTGGAAAGCTCTGCTCTGCTCTGCTGCTAGTGG
ATGGATGATCTACTGTGCGCTGTGTAGGGGACGTCCACTCGTGGGGCACC
CTCTAGTAGACACTAGATATCCCTGCTCAGGAACCCGGCTGATCCCGTAA
GAACAGATCCTGTTCGCCCGCATGTCTATCACGGTTCTCGCTAGTTACCT
CTACATGTGGTATGCGCGTGTACCGCATCCGTTCGGAACGCGCGATACCT
TCACTCTGCTGATGCTGCGCGCCGGAGGTGGATTCTTTGGCGTCTACGGG
CTCTATTACTCCGTGCAGTACCTGCCGCTCTCCGAGGCGACCGTGGTGAC
CTTTTTAGCGCCGATCCTGAGCTGCTATGCTTGCTCGCTTTTGATCCCCA
ACGAGTTCTTCACGCGCAAGCAGCAGCTCGCCGGACTGGTCTCGCTGGCG
GGTGTCGTTCTCATCGCTCGGCCGTTCCCGTTCATGCGATCGGGCGGCGA
CTCCGAGCCGGAGCAGGGCGATAAGCCCGGTGCCACCGATAGCTACCACC
ACGTGCTGGCCATCGTGGTGGCTCTGTTCGGAGTGCTGGGTGCCTCGTGT
GCGTACACCACGATCCGGATGATCGGACAGCGCTGCCACCCGCTCGTCTC
GGTGACTTACTTCTCCACATTCACGACAGTCGTAGCTACGCTGGCGATGC
TGGTCGTGCCATCGATTCCGCTGGAGCTGCCGGGCACAGTGCTGGAATGG
ACGCTGCTTCTGGGGTTAGGTGTCAGCGGATTCCTGCTGCAGTTCCTGCT
CACAGCAGGTCTGGCATATGTACCGCCGGTGCGGAAGACCAAGGCGTCAG
TAGACTGGAACCGGGACTATGGCACGCGCGACGAGGAAGAAGAGCCGTCC
GCGAAGCCAACATCGTCCGGATCACGGGCGACTTTCATGTTGTACACGCA
GATGCTGTTTGCCGTGTTCTATGACCGGGCGATCTGGGGTAGTACGTTGT
CGGCGGTGAGCTGGATGGGATCAGTGCTGATCCTGGTGAGCGCCATGTAT
GTGGCCATGGCGCGAGAGGGCGCAAAGGGAACCTCATCCGAGGAGAAGGA
GGGCGGAGATCAAGAGGGCACGGACGAGAACCGGGCTGGAGTGGCTGCAG
AAGAGCGTCTGGAGGAAGGCGGGGGAAGGCAAGTGAGCGGGGGTCGCGCA
TGAGGCGTTTTGCAAATCGCGCGACGATCTGAGGGATTTGCTTGATAAAT
TGGGGAAGGAGGAAGCAGGTCGGCGTCACTGTGCATATCCCGACAGTAGA
AGGAAAGAGATTGAGCGATGCCACATGTCGATGGAGGAGAAGGGGCTCAC
ATTGCATACACAGCATACTGGCGCAGAGCATTTATACAAAGGGTATATAT
AAAAATTGTAGTTATTGATTGACTGATTGATAGAAGTGAAAAGTGAGGCG
GTC
back to top

Coding sequence (CDS) from alignment at KZ851904.1:369678..371780-

>M747DRAFT_293307-T1 ID=M747DRAFT_293307-T1|Name=M747DRAFT_293307-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2838bp|location=Sequence derived from alignment at KZ851904.1:369678..371780- (Aspergillus niger ATCC 13496)
ATCCTGTTCGCCCGCATGTCTATCACGGTTCTCGCTAGTTACCTCTACAT
GTGGTATGCGCGTGTACCGCATCCGTTCGGAACGCGCGATACCTTCACTC
TGCTGATGCTGCGCGCCGGAGGTGGATTCTTTGGCGTCTACGGGCTCTAT
TACTCCGTGCAGTACCTGCCGCTCTCCGAGGCGACCGTGGTGACCTTTTT
AGCGCCGATCCTGAGCTGCTATGCTTGCTCGCTTTTGATCCCCAACGAGT
TCTTCACGCGCAAGCAGCAGCTCGCCGGACTGGTCTCGCTGGCGGGTGTC
GTTCTCATCGCTCGGCCGTTCCCGTTCATGCGATCGGGCGGCGACTCCGA
GCCGGAGCAGGGCGATAAGCCCGGTGCCACCGATAGCTACCACCACGTGC
TGGCCATCGTGGTGGCTCTGTTCGGAGTGCTGGGTGCCTCGTGTGCGTAC
ACCACGATCCGGATGATCGGACAGCGCTGCCACCCGCTCGTCTCGGTGAC
TTACTTCTCCACATTCACGACAGTCGTAGCTACGCTGGCGATGCTGGTCG
TGCCATCGATTCCGCTGGAGCTGCCGGGCACAGTGCTGGAATGGACGCTG
CTTCTGGGGTTAGGTGTCAGCGGATTCCTGCTGCAGTTCCTGCTCACAGC
AGGTCTGGCATATGTACCGCCGGTGCGGAAGACCAAGGCGTCAGTAGACT
GGAACCGGGACTATGGCACGCGCGACGAGGAAGAAGAGCCGTCCGCGAAG
CCAACATCGTCCGGATCACGGGCGACTTTCATGTTGTACACGCAGATGCT
GTTTGCCGTGTTCTATGACCGGGCGATCTGGGGTAGTACGTTGTCGGCGG
TGAGCTGGATGGGATCAGTGCTGATCCTGGTGAGCGCCATGTATGTGGCC
ATGGCGCGAGAGGGCGCAAAGGGAACCTCATCCGAGGAGAAGGAGGGCGG
AGATCAAGAGGGCACGGACGAGAACCGGGCTGGAGTGGCTGCAGAAGAGC
GTCTGGAGGAAGGCGGGGGAAGGCAAGTGAGCGGGGGTCGCGCATGAATG
TCTCTGAATCCATCTGACGCAAGGGGCGTCAACTCGACCGCGGGTGAAGA
AACTCAACAATATGTAACTTTACTACCGGCTCAGAATCAAGTCGATGAGC
AGCACCAACAGCACGTTGTCTATTCGGAGCAGACGCCGCTGCTTCGGTCG
GGACTTGGTCATGAGTCTGCTTCTGCTTCTTCAGCAATGCATCACTATTC
ATCTCAGCCCTGGTGGAAGACGGCGCAGCAGGTAGCCTGCGATGTCTGGC
TGCAGGGCAAGGGCATGATCCTGGTCATGTTCTCGCAATTCTTTGGCGCG
TCGATGAATGTCATGACGCAGTTTTTGGAAATCAAAGGTCGTGATGGGAA
GGGGTTTCATCCGTTTCAGATCCTGTTCGCCCGCATGTCTATCACGGTTC
TCGCTAGTTACCTCTACATGTGGTATGCGCGTGTACCGCATCCGTTCGGA
ACGCGCGATACCTTCACTCTGCTGATGCTGCGCGCCGGAGGTGGATTCTT
TGGCGTCTACGGGCTCTATTACTCCGTGCAGTACCTGCCGCTCTCCGAGG
CGACCGTGGTGACCTTTTTAGCGCCGATCCTGAGCTGCTATGCTTGCTCG
CTTTTGATCCCCAACGAGTTCTTCACGCGCAAGCAGCAGCTCGCCGGACT
GGTCTCGCTGGCGGGTGTCGTTCTCATCGCTCGGCCGTTCCCGTTCATGC
GATCGGGCGGCGACTCCGAGCCGGAGCAGGGCGATAAGCCCGGTGCCACC
GATAGCTACCACCACGTGCTGGCCATCGTGGTGGCTCTGTTCGGAGTGCT
GGGTGCCTCGTGTGCGTACACCACGATCCGGATGATCGGACAGCGCTGCC
ACCCGCTCGTCTCGGTGACTTACTTCTCCACATTCACGACAGTCGTAGCT
ACGCTGGCGATGCTGGTCGTGCCATCGATTCCGCTGGAGCTGCCGGGCAC
AGTGCTGGAATGGACGCTGCTTCTGGGGTTAGGTGTCAGCGGATTCCTGC
TGCAGTTCCTGCTCACAGCAGGTCTGGCATATGTACCGCCGGTGCGGAAG
ACCAAGGCGTCAGTAGACTGGAACCGGGACTATGGCACGCGCGACGAGGA
AGAAGAGCCGTCCGCGAAGCCAACATCGTCCGGATCACGGGCGACTTTCA
TGTTGTACACGCAGATGCTGTTTGCCGTGTTCTATGACCGGGCGATCTGG
GGTAGTACGTTGTCGGCGGTGAGCTGGATGGGATCAGTGCTGATCCTGGT
GAGCGCCATGTATGTGGCCATGGCGCGAGAGGGCGCAAAGGGAACCTCAT
CCGAGGAGAAGGAGGGCGGAGATCAAGAGGGCACGGACGAGAACCGGGCT
GGAGTGGCTGCAGAAGAGCGTCTGGAGGAAGGCGGGGGAAGGCAAGTGAG
CGGGGGTCGCGCATGAATGTCTCTGAATCCATCTGACGCAAGGGGCGTCA
ACTCGACCGCGGGTGAAGAAACTCAACAATATGTAACTTTACTACCGGCT
CAGAATCAAGTCGATGAGCAGCACCAACAGCACGTTGTCTATTCGGAGCA
GACGCCGCTGCTTCGGTCGGGACTTGGTCATGAGTCTGCTTCTGCTTCTT
CAGCAATGCATCACTATTCATCTCAGCCCTGGTGGAAGACGGCGCAGCAG
GTAGCCTGCGATGTCTGGCTGCAGGGCAAGGGCATGATCCTGGTCATGTT
CTCGCAATTCTTTGGCGCGTCGATGAATGTCATGACGCAGTTTTTGGAAA
TCAAAGGTCGTGATGGGAAGGGGTTTCATCCGTTTCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_293307M747DRAFT_293307Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293307-T1M747DRAFT_293307-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293307-T1.cdsM747DRAFT_293307-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293307-T1.utr3p1M747DRAFT_293307-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293307-T1.exon2M747DRAFT_293307-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_293307-T1.exon1M747DRAFT_293307-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293307-T1.utr5p1M747DRAFT_293307-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR000620
DBxrefPFAM:PF00892
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851904.1supercontigKZ851904.1:369678..371780 -
Powered by Drupal