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M747DRAFT_293356-T1, M747DRAFT_293356-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_293356-T1
Unique NameM747DRAFT_293356-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:525828..528574-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_293356-T1 ID=M747DRAFT_293356-T1|Name=M747DRAFT_293356-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2747bp|location=Sequence derived from alignment at KZ851904.1:525828..528574- (Aspergillus niger ATCC 13496)
ATTTCTCGTCGCGCAAGGCTGTATCTTAGCTTGGGATAAGCTTCTGCTTG
GGAAGATCGAGCTTGCCTTGTTAAAATCTAGGCGCAATTACTCCCTGGCC
TTGTCGACAACACACCGCGCGTGCCTTCTGCCCCCCCACCTCCTCCCGCA
TCCCGACCTTTTCTCTTCTTTCCGGTGCAACGCACAAATATCAGTAATTG
CTTGGACTCGATACGCGCGGATTTGACGGATCGCAATGGTGCAGCAGGAC
GAGCGGGAAGTCGCCGAGCTGGTCACCAGCCTGGAGGCTGCCAGCAGGAA
AGGCACAGCTCATGGGAAGAAGTCGGGGTTCAAGTGCAAGAAATCTACCT
TCGACGTTGAAAAAGCAGACAAAATCCAGGTGCATTCGTGGAAGTTCATG
GACTGGGATTATAAACGCGACGATCTGCCGACCTATGCGCGAGGGCTGTT
TACCACTCAGAGGAAGGATGGCACCCAGGAGATTGCGGTTCGCGGATACG
ACAAGTTCTTCAACGTGGACGAGGTGAATGACACAAAGTGGAGGAACATC
GAGATGAATACTAGGGGTCCCTACGAGCTCAGTGTGAAGGAGAACGGATG
TATCATTTTCATTTCTGGTCTTGAGGATGGCACCTTGTTGGTCTGCAGCA
AGCATTCCACGGGTGTTCGGTCTGATACAAACCTCAGCCATGCTCAAGCT
GGTGAACGCTGGGTCGAGCGACATGTCAGTTCTGTTGGAAGAAATGTAAA
GGACTTGGCACGAGAGCTTCGCAGACTCAATGTCACCGCAGTAGGCGAGC
TCTGTGACGACACCTTCGAGGAGCATGTCCTTGCTTACGACGAAAGCGCT
TCGGGCATCTATCTGCATGGACTCAACTTCAACGTGCCCCAATTTGCCAC
GCAGCCTAGCTCGGAGGTACACAAGTTTGCGGATGCATGGGGATTTAAGA
AGGCCAACTTTGTCGTGTATGAAGACCTCGACCAGGTCAAGAAATTCCTC
GACAATTGCGCCGAAACAGGCACCTGGGATGGCCGGGAGACCGAGGGGTT
TGTGGTCCGATGCCACATGGGCGATAGGGGACGTCCCCCCTACCGGGATT
GGTTCTTCAAGTACAAGTTCGAAGAGCCCTACTTGATGTACAGGCAATGG
CGGGAGTGCACGAAGGCAGTCATTGCAGGAAAGGTTCCTAACATCAAGAA
GCACAAGAAGATCACTGAGGAGTATCTCCATTACGCGCGAAGACAGCTCG
CTAAAACCCCTGGTCTCGCACAACAGTACCAGCAAAACCACGGCATCATT
TCTTTGAGAGAGGGTTTCTTGCAAGAGAGAGGCCTCAACGGATCTGAGAT
CATCCAAATGGAGTCTGACGAAGCCGGCGATGTGACGCACGACGTAATTC
TTGTCCCCGTTGCTTCCCTGGGCTGCGGCAAGACGACAGTGGCTTTGGCT
CTTTGCAAATTGTTTGGATGGGGACAGGTCCAGAACGATAACATTCCGAA
ACAGAAGAACAAGCCAAAGAAATTCTCCTTGGACATTACAAACCTCCTTG
CCCAACATCCTGTGGTGATAGCAGACCGGAACAACCACATGCGACGCGAA
CGGCAGCAACTTATAGACGATGTGTCGGTTGTAATTTCCAAAGCTCGCTA
TGTCGCACTCCAGTACGTCCACGAACCTAAAGGACAATTACTTCCTGGCA
TCCGTGAGGTAACGCGGAGACGAGTCCTTGACCGTGGAGACAACCACCAG
ACCATCCGGGCGGGAAGCAAGAATCCGGAGGAGGTCATCGGAATCATGGA
AGGTTTCCTGAACCGGTTCGAGGCTGTTGACACCGACCGTGAGCCAGACT
GCTACTTCGACCAAGTAATTGACCTGGATGTTGGTGCTTCTTCGCGGGAG
AATCTGGAGACAGTGGTGAAAGCGTTACATTCATTCTATCCCAAGCTCGT
GAAAGAAGTTCCGACAGCAGAGCAACTGGATGACGCCATCTACTGGTCGA
TGAACGAATACCAAGTGCAGCTGGATTGGAGCCATCAATACGGATCCCAG
AAACCGAAGAACAAGAACAAGAACCAGAATCAGAACCCCGGCAGCCCTGC
ACCCACAGCCGGCCCCACCCCCGAAGACCTGGCCAAGAAGATCGAGTATT
TCAACATCTCCCTACCCGCTGCAGAGGTGAAAAATATCCTCGAGTCTTTG
TTCCCTCCGTCTACATCCCCCGAAAAAGCACGTCTCTACAGACAGCTCAT
CAACAGCAGACGCGTGCAGCCCGCCTTCCATGTGACGTTGATCCACCGCG
CCTCGAAAAAAGAACATCCCGGTATCTGGGACGAATACGTCCGCCAGTAC
ATCGAGAAGATGAAGAGCAAGCCCGAGTCTGATCCCACCATCACCCCAAC
GTTGGCTCCGGCTCGCGTACGTCTTGAGCGTCTTATATGGGACAACCGTC
TCATGGCATTTGTAGCACGGATATTCCCCCCAGATGATCAGAACCTGGCA
GAATGGCCGTGCGCAAACGAAATACCCCATGTCACTGTGGGAACTGCGTC
TCCCGATGTGAAGCCCAAAGAGAGCAACGATCTGTTGAAGTGGTGGCATG
AAGTTGGCTCGGGAGGAGAAACAGGGCTTTGGGAAGCCGAGATCCCAGGC
GTGAAGGTCGTACAGGGAACAGTAGGTGTGGTGATGAGTCGAGGCAAATA
AGTTAATGACTGATGACGACGAGTCATGAGTGATGATTGCAAAGGAA
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Coding sequence (CDS) from alignment at KZ851904.1:525828..528574-

>M747DRAFT_293356-T1 ID=M747DRAFT_293356-T1|Name=M747DRAFT_293356-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2466bp|location=Sequence derived from alignment at KZ851904.1:525828..528574- (Aspergillus niger ATCC 13496)
ATGGTGCAGCAGGACGAGCGGGAAGTCGCCGAGCTGGTCACCAGCCTGGA
GGCTGCCAGCAGGAAAGGCACAGCTCATGGGAAGAAGTCGGGGTTCAAGT
GCAAGAAATCTACCTTCGACGTTGAAAAAGCAGACAAAATCCAGGTGCAT
TCGTGGAAGTTCATGGACTGGGATTATAAACGCGACGATCTGCCGACCTA
TGCGCGAGGGCTGTTTACCACTCAGAGGAAGGATGGCACCCAGGAGATTG
CGGTTCGCGGATACGACAAGTTCTTCAACGTGGACGAGGTGAATGACACA
AAGTGGAGGAACATCGAGATGAATACTAGGGGTCCCTACGAGCTCAGTGT
GAAGGAGAACGGATGTATCATTTTCATTTCTGGTCTTGAGGATGGCACCT
TGTTGGTCTGCAGCAAGCATTCCACGGGTGTTCGGTCTGATACAAACCTC
AGCCATGCTCAAGCTGGTGAACGCTGGGTCGAGCGACATGTCAGTTCTGT
TGGAAGAAATGTAAAGGACTTGGCACGAGAGCTTCGCAGACTCAATGTCA
CCGCAGTAGGCGAGCTCTGTGACGACACCTTCGAGGAGCATGTCCTTGCT
TACGACGAAAGCGCTTCGGGCATCTATCTGCATGGACTCAACTTCAACGT
GCCCCAATTTGCCACGCAGCCTAGCTCGGAGGTACACAAGTTTGCGGATG
CATGGGGATTTAAGAAGGCCAACTTTGTCGTGTATGAAGACCTCGACCAG
GTCAAGAAATTCCTCGACAATTGCGCCGAAACAGGCACCTGGGATGGCCG
GGAGACCGAGGGGTTTGTGGTCCGATGCCACATGGGCGATAGGGGACGTC
CCCCCTACCGGGATTGGTTCTTCAAGTACAAGTTCGAAGAGCCCTACTTG
ATGTACAGGCAATGGCGGGAGTGCACGAAGGCAGTCATTGCAGGAAAGGT
TCCTAACATCAAGAAGCACAAGAAGATCACTGAGGAGTATCTCCATTACG
CGCGAAGACAGCTCGCTAAAACCCCTGGTCTCGCACAACAGTACCAGCAA
AACCACGGCATCATTTCTTTGAGAGAGGGTTTCTTGCAAGAGAGAGGCCT
CAACGGATCTGAGATCATCCAAATGGAGTCTGACGAAGCCGGCGATGTGA
CGCACGACGTAATTCTTGTCCCCGTTGCTTCCCTGGGCTGCGGCAAGACG
ACAGTGGCTTTGGCTCTTTGCAAATTGTTTGGATGGGGACAGGTCCAGAA
CGATAACATTCCGAAACAGAAGAACAAGCCAAAGAAATTCTCCTTGGACA
TTACAAACCTCCTTGCCCAACATCCTGTGGTGATAGCAGACCGGAACAAC
CACATGCGACGCGAACGGCAGCAACTTATAGACGATGTGTCGGTTGTAAT
TTCCAAAGCTCGCTATGTCGCACTCCAGTACGTCCACGAACCTAAAGGAC
AATTACTTCCTGGCATCCGTGAGGTAACGCGGAGACGAGTCCTTGACCGT
GGAGACAACCACCAGACCATCCGGGCGGGAAGCAAGAATCCGGAGGAGGT
CATCGGAATCATGGAAGGTTTCCTGAACCGGTTCGAGGCTGTTGACACCG
ACCGTGAGCCAGACTGCTACTTCGACCAAGTAATTGACCTGGATGTTGGT
GCTTCTTCGCGGGAGAATCTGGAGACAGTGGTGAAAGCGTTACATTCATT
CTATCCCAAGCTCGTGAAAGAAGTTCCGACAGCAGAGCAACTGGATGACG
CCATCTACTGGTCGATGAACGAATACCAAGTGCAGCTGGATTGGAGCCAT
CAATACGGATCCCAGAAACCGAAGAACAAGAACAAGAACCAGAATCAGAA
CCCCGGCAGCCCTGCACCCACAGCCGGCCCCACCCCCGAAGACCTGGCCA
AGAAGATCGAGTATTTCAACATCTCCCTACCCGCTGCAGAGGTGAAAAAT
ATCCTCGAGTCTTTGTTCCCTCCGTCTACATCCCCCGAAAAAGCACGTCT
CTACAGACAGCTCATCAACAGCAGACGCGTGCAGCCCGCCTTCCATGTGA
CGTTGATCCACCGCGCCTCGAAAAAAGAACATCCCGGTATCTGGGACGAA
TACGTCCGCCAGTACATCGAGAAGATGAAGAGCAAGCCCGAGTCTGATCC
CACCATCACCCCAACGTTGGCTCCGGCTCGCGTACGTCTTGAGCGTCTTA
TATGGGACAACCGTCTCATGGCATTTGTAGCACGGATATTCCCCCCAGAT
GATCAGAACCTGGCAGAATGGCCGTGCGCAAACGAAATACCCCATGTCAC
TGTGGGAACTGCGTCTCCCGATGTGAAGCCCAAAGAGAGCAACGATCTGT
TGAAGTGGTGGCATGAAGTTGGCTCGGGAGGAGAAACAGGGCTTTGGGAA
GCCGAGATCCCAGGCGTGAAGGTCGTACAGGGAACAGTAGGTGTGGTGAT
GAGTCGAGGCAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006388tRNA splicing, via endonucleolytic cleavage and ligation
Vocabulary: Molecular Function
TermDefinition
GO:0008081phosphoric diester hydrolase activity
GO:0051730GTP-dependent polyribonucleotide 5'-hydroxyl-kinase activity
GO:0003972RNA ligase (ATP) activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_293356M747DRAFT_293356Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293356-T1.cdsM747DRAFT_293356-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293356-T1.utr3p1M747DRAFT_293356-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293356-T1.exon1M747DRAFT_293356-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293356-T1.utr5p1M747DRAFT_293356-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293356-T1M747DRAFT_293356-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261IBJ
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR015965
DBxrefInterPro:IPR012387
DBxrefInterPro:IPR019039
DBxrefInterPro:IPR015966
DBxrefPFAM:PF08303
DBxrefPFAM:PF08302
DBxrefPFAM:PF09511
ProducttRNA ligase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851904.1supercontigKZ851904.1:525828..528574 -
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