You are here

Home

M747DRAFT_293396-T1, M747DRAFT_293396-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_293396-T1
Unique NameM747DRAFT_293396-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:640559..642343-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_293396-T1 ID=M747DRAFT_293396-T1|Name=M747DRAFT_293396-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1785bp|location=Sequence derived from alignment at KZ851904.1:640559..642343- (Aspergillus niger ATCC 13496)
CTGCATCTCATCTACGCAGCTTTGCTTTCATTTTGCGGACCTACACAGCT
TGTCTGCTGGTCACGCTGCTGTTTGCCCATCATGTCAAATGCGGAGGAGC
TGTTGAGGGATTTCGAGGAGGACGACGAGGATCTTCAGGCTGGCGATGGC
CTCGAAGAGGAAGCTGTCGATGAGGAGCAGCTGGCACAAGCTCCTGAGGT
TACTAACGAGTTTGACGTCGCCTTGTCGACCGCCGACGAACTGACCCGTC
TACACAAAGTGCTGCGCGATCACTACTCTATACGGTTTCCTGAGCTCGAG
ACGCTCGTGACTACTCCGATCGACTATGCGAAAACTGTCGCTATCCTAAA
AAATGGCCCGCTCAACGATATTAAAGCTCTGTCAACCTCGTCAGATAACA
TGGTTGGCGTGCCACTGAGGTCAATTTTGGATGGGCCATCCCTGATGGTT
GTGGCCGTGGAGGGTACCACCACTCGAGGCCGGGAGATGACCGAGGCCGA
ACTCAAGACCGTGATGGATACATGCGAACGGATTCTCAAGCTCGATCGCG
AACGGACGGCGCTTACAGAGAGCATTCAGTCCCGGATGAGCCAGATCGCT
CCCAACTTGGCGGCCTTGATCGGACCGGAGACAGCGGCTCAGTTCTTGAA
CCAGACCGGAGGTCTGCTCGAGCTAGCGAAGATTCCTGCGTGCAACCTAG
CTGCACAGGGCTCGAAGCGATCGGAAGGACTGGGATTCGCTACAAATATT
GGTATTCGGTCTCAGGGGTTCCTCTACAACTCGCCAATTATACAAGGTGT
CCCGAACGATCTCAAGCGGCAGGCCATTCGCATCGTCTCCGCCAAGATGG
TCCTTGCTACGCGAGCAGATGTATCCAAGTACAGTCCTGACGGATCTTTG
GGTGAAGAACTGAAGCAGCAGTGTTTCCAGCGTCTGGAGAAACTTACGGA
ACCCGCGCCGAACTCGGGCGTAAAGGCGCTCCCCGCTCCGGACGACAAGC
CGTCCCGTAAGCGAGGTGGACGACGGGCGAGAAAGGCCAAGGAAGCTGTC
GCCATGACGGAACTTCGTAAGGCCCAGAACCGGGTTGCCTTTGGTAGGGA
GGAAGCAGAAGTTGGATATGGCACCGGAGAGGGAACGGTCGGACTGGGCA
TGCTTGGCCAACAAAACGATGGACGGATCCGCGCGACTCAGATCGACCAG
AGAACCCGGGCGAAGCTTAGTAAGAACAACAAGGGATGGGGTACCGCAAC
TCCCGTCAGTGGTACCTCTACATCTCTCCGTGCATTCGGCTCCAATGCTA
GTGGGACAGCCAGTGTGCTTCAGGCGAAGGGGCTGCGAACCTCTGGAGTT
GGCACCTCGCTGGGAGGATCAGCCGGTACTGCCAGTACCATTGCCTTCAC
GCCTGTGCAAGGGTTAGAGCTGGTGGACCCTAAGGTGCAAGCGGAATTGA
GTCGGAAACGCAAGGCCGAGGAGGATCGGTGGTTCAAGTCTGGCACATTC
ACGCAGGTTGGTGGCCAGAGCAGCACGGCGCCTCAAGGGGGGAATGGAGG
CTTCAAGGTTCCGGCATTGCCTCCGAAGAAGAAGGTCGATACCGGCGAGG
GCAGAATGGCACCGCCACCGCCGCCGGTGAAGCAGTAAAGGGAGATCTGG
TGTTTTCAAGGTTACGAGCATTCATAAGGCGTTATAACGTGGGATTTGCA
TGATACCATCAAGAACTGTATGATAGGATTAAATAAAAACACCAGTGCTT
AATTATGGTTTAGCCTGTTCAATGACCAATGGACG
back to top

Coding sequence (CDS) from alignment at KZ851904.1:640559..642343-

>M747DRAFT_293396-T1 ID=M747DRAFT_293396-T1|Name=M747DRAFT_293396-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1557bp|location=Sequence derived from alignment at KZ851904.1:640559..642343- (Aspergillus niger ATCC 13496)
ATGTCAAATGCGGAGGAGCTGTTGAGGGATTTCGAGGAGGACGACGAGGA
TCTTCAGGCTGGCGATGGCCTCGAAGAGGAAGCTGTCGATGAGGAGCAGC
TGGCACAAGCTCCTGAGGTTACTAACGAGTTTGACGTCGCCTTGTCGACC
GCCGACGAACTGACCCGTCTACACAAAGTGCTGCGCGATCACTACTCTAT
ACGGTTTCCTGAGCTCGAGACGCTCGTGACTACTCCGATCGACTATGCGA
AAACTGTCGCTATCCTAAAAAATGGCCCGCTCAACGATATTAAAGCTCTG
TCAACCTCGTCAGATAACATGGTTGGCGTGCCACTGAGGTCAATTTTGGA
TGGGCCATCCCTGATGGTTGTGGCCGTGGAGGGTACCACCACTCGAGGCC
GGGAGATGACCGAGGCCGAACTCAAGACCGTGATGGATACATGCGAACGG
ATTCTCAAGCTCGATCGCGAACGGACGGCGCTTACAGAGAGCATTCAGTC
CCGGATGAGCCAGATCGCTCCCAACTTGGCGGCCTTGATCGGACCGGAGA
CAGCGGCTCAGTTCTTGAACCAGACCGGAGGTCTGCTCGAGCTAGCGAAG
ATTCCTGCGTGCAACCTAGCTGCACAGGGCTCGAAGCGATCGGAAGGACT
GGGATTCGCTACAAATATTGGTATTCGGTCTCAGGGGTTCCTCTACAACT
CGCCAATTATACAAGGTGTCCCGAACGATCTCAAGCGGCAGGCCATTCGC
ATCGTCTCCGCCAAGATGGTCCTTGCTACGCGAGCAGATGTATCCAAGTA
CAGTCCTGACGGATCTTTGGGTGAAGAACTGAAGCAGCAGTGTTTCCAGC
GTCTGGAGAAACTTACGGAACCCGCGCCGAACTCGGGCGTAAAGGCGCTC
CCCGCTCCGGACGACAAGCCGTCCCGTAAGCGAGGTGGACGACGGGCGAG
AAAGGCCAAGGAAGCTGTCGCCATGACGGAACTTCGTAAGGCCCAGAACC
GGGTTGCCTTTGGTAGGGAGGAAGCAGAAGTTGGATATGGCACCGGAGAG
GGAACGGTCGGACTGGGCATGCTTGGCCAACAAAACGATGGACGGATCCG
CGCGACTCAGATCGACCAGAGAACCCGGGCGAAGCTTAGTAAGAACAACA
AGGGATGGGGTACCGCAACTCCCGTCAGTGGTACCTCTACATCTCTCCGT
GCATTCGGCTCCAATGCTAGTGGGACAGCCAGTGTGCTTCAGGCGAAGGG
GCTGCGAACCTCTGGAGTTGGCACCTCGCTGGGAGGATCAGCCGGTACTG
CCAGTACCATTGCCTTCACGCCTGTGCAAGGGTTAGAGCTGGTGGACCCT
AAGGTGCAAGCGGAATTGAGTCGGAAACGCAAGGCCGAGGAGGATCGGTG
GTTCAAGTCTGGCACATTCACGCAGGTTGGTGGCCAGAGCAGCACGGCGC
CTCAAGGGGGGAATGGAGGCTTCAAGGTTCCGGCATTGCCTCCGAAGAAG
AAGGTCGATACCGGCGAGGGCAGAATGGCACCGCCACCGCCGCCGGTGAA
GCAGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_293396M747DRAFT_293396Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293396-T1.cdsM747DRAFT_293396-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293396-T1.utr3p1M747DRAFT_293396-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293396-T1.exon1M747DRAFT_293396-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293396-T1.utr5p1M747DRAFT_293396-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293396-T1M747DRAFT_293396-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264B2X
DBxrefInterPro:IPR036070
DBxrefInterPro:IPR002687
DBxrefInterPro:IPR029012
DBxrefInterPro:IPR042239
DBxrefInterPro:IPR019175
DBxrefInterPro:IPR012976
DBxrefPFAM:PF09785
DBxrefPFAM:PF01798
ProductNop domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851904.1supercontigKZ851904.1:640559..642343 -
Powered by Drupal