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M747DRAFT_293538-T1, M747DRAFT_293538-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_293538-T1
Unique NameM747DRAFT_293538-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851905.1:204743..206714-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_293538-T1 ID=M747DRAFT_293538-T1|Name=M747DRAFT_293538-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1972bp|location=Sequence derived from alignment at KZ851905.1:204743..206714- (Aspergillus niger ATCC 13496)
TCCAGAAGCGCTTTATCTGCGAAAGACAGGTAGAGCCTTGTGCGCGCAGC
AAAGATGATTTTCGAGGAGCAACGGTTTATCCACGAGGACCTTGAGCGCC
TAGAGCAGGCGATTGCCGACCGCGTTGCCGAAGAGCCTCGTAATGTAAGT
AACTCTGCAGTCTCTATCTCGTCGCTCTCTGCTAACTCACTCCTTTACTT
TCAGATTCGGGATCGCTTGGCTCGCGATCATGAAGTCGCACATTTCTTAA
AGCGTATAGAAGACCAGTCCAAGAGGTTGCTCGACATCTACAAGGATGCA
GACGGCGCGCGTGAGAAGGAAATCCAAACCATCTCAACCGGCGATCAATT
CGAGGAGTTCTACAAGCAACTGGATGAGATCAAGGACTTCCATAAGCGCT
ACCCTAATGAGCCAGTGGAAAACCTTGAACGGGCTTATAAGCGTCGTCAG
CCCGGAGAGGGTGAAGTAACGGGCATGGAGATCGACAATCTATTCACCGG
TGAAGAGGGTTATGGACAGTTTCTGGACCTCACAACACTGCACGAAGACT
ACCTCAATTTGCCTGGGGTCAAACGGCTCTCATATGTGCAATACCTCGAC
ATATTCGATGCGTTTACTCCTCCGCAACTTCCGATTAAGCGAAACAACAA
ACTTTCCGATCGGTATTTCAAGTATGTCGGCGAACTTGCAAACTACTTGG
AAAGCTTCATCAAGAAAGTGAAGCCGTTACAAGATCTGGACAAACTTTTT
GCTAGCTTTGATGAGGAGTTCGAGAAGCAATGGACGGCGAATCAGGTACC
TGGTTGGACGGAGGAGGTTGCTGAAAATGGTAACCAAGGTCCGAAGACCG
AGGGCTCCGGAGAAGGCATCTGGTGTGCTGACTGCGAGAGGGAATTCAAG
AATGAGAATGTCTATAAGAATCACTTGACAGGCAAAAAGCACATCCGGGC
CGCTGAAGCTCGCAAAGCTGCCGGGGATACTGGCGCGAAACCGGCAGCCC
CTGCGACGAACGGCGCATCATCCGTGGCTCATCGTCTTAAGGAACGTGCA
GTCGCAGAGAGGGAACATCGGGTGCGTTCTCTGACGCAGGTACTGCAGCC
CGAGCGTGTAGCGACGAGGATGAACGTGGAGCGGAGACAGGGTATGACTG
AACGGGAGCGCCAAATGGAACTTGAAGCTCTGCTTAATGAGTCTGAGAAC
CCTGGCGGTGATCGTGCTGGCGATCAATCTGACGAGGACGACGAAGACCG
AATCTACAATCCCCTCAAACTGCCACTTGCTTGGGACGGCAAGCCAATTC
CCTACTGGCTTTACAAGCTGCATGGCCTGGGGGTAGAGTATCCTTGCGAG
ATCTGCGGTAACTTTGTGTATATGGGCCGTCGAGCTTTTGACAAGCATTT
CTCAGAGGCCCTACATATCTTTGGTTTGAAGTGTCTTGGTATCACTTCTA
ATACCAACCTTTTCCGTGAAATCACTCGGATTGAGGATGCAATCAGGCTT
TGGGAGAAATTAGAGCAGGACCGCAAGAAGGATAGAGATAATCGCGACAA
TGTGGTACAGATGGAGGACGCCGAAGGCAATGTGATGCCGGAGAGGATCT
ACCTTGAGTACGTGCCCCCAACAGTTCCGCGGCCTAATGGAACCTTTACT
AATGTTTACCAGTCTGCAAAAGCAAGGTATACTGTAATCGGCGACCCCCG
ATCAGCCTTTCTTCATGTTCTTTGCATTGCCTTTCGCTATATTTCTTATT
TGAAAAGCCTGGAGTTTGGTGGGTGTCTTTTCTCGAATTTCCTTACTGCT
GCGTGGTCACTGGGATAGTGTTGGTTGGGAACGGCTATATCAAAGCAAAG
TCAACCTTAGACAGCTTTGCTTTTCATGTATTCTACACCACAAGAATATT
TCGATATCATCTTCGGGAGCAATTCAAAGCCAAAAGTATCAATTTGATCT
CAACTTTGGCTCGTATCACGTG
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Coding sequence (CDS) from alignment at KZ851905.1:204743..206714-

>M747DRAFT_293538-T1 ID=M747DRAFT_293538-T1|Name=M747DRAFT_293538-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4554bp|location=Sequence derived from alignment at KZ851905.1:204743..206714- (Aspergillus niger ATCC 13496)
TCTGCAAAAGCAAGGTATACTGTAAATTCGGGATCGCTTGGCTCGCGATC
ATGAAGTCGCACATTTCTTAAAGCGTATAGAAGACCAGTCCAAGAGGTTG
CTCGACATCTACAAGGATGCAGACGGCGCGCGTGAGAAGGAAATCCAAAC
CATCTCAACCGGCGATCAATTCGAGGAGTTCTACAAGCAACTGGATGAGA
TCAAGGACTTCCATAAGCGCTACCCTAATGAGCCAGTGGAAAACCTTGAA
CGGGCTTATAAGCGTCGTCAGCCCGGAGAGGGTGAAGTAACGGGCATGGA
GATCGACAATCTATTCACCGGTGAAGAGGGTTATGGACAGTTTCTGGACC
TCACAACACTGCACGAAGACTACCTCAATTTGCCTGGGGTCAAACGGCTC
TCATATGTGCAATACCTCGACATATTCGATGCGTTTACTCCTCCGCAACT
TCCGATTAAGCGAAACAACAAACTTTCCGATCGGTATTTCAAGTATGTCG
GCGAACTTGCAAACTACTTGGAAAGCTTCATCAAGAAAGTGAAGCCGTTA
CAAGATCTGGACAAACTTTTTGCTAGCTTTGATGAGGAGTTCGAGAAGCA
ATGGACGGCGAATCAGGTACCTGGTTGGACGGAGGAGGTTGCTGAAAATG
GTAACCAAGGTCCGAAGACCGAGGGCTCCGGAGAAGGCATCTGGTGTGCT
GACTGCGAGAGGGAATTCAAGAATGAGAATGTCTATAAGAATCACTTGAC
AGGCAAAAAGCACATCCGGGCCGCTGAAGCTCGCAAAGCTGCCGGGGATA
CTGGCGCGAAACCGGCAGCCCCTGCGACGAACGGCGCATCATCCGTGGCT
CATCGTCTTAAGGAACGTGCAGTCGCAGAGAGGGAACATCGGGTGCGTTC
TCTGACGCAGGTACTGCAGCCCGAGCGTGTAGCGACGAGGATGAACGTGG
AGCGGAGACAGGGTATGACTGAACGGGAGCGCCAAATGGAACTTGAAGCT
CTGCTTAATGAGTCTGAGAACCCTGGCGGTGATCGTGCTGGCGATCAATC
TGACGAGGACGACGAAGACCGAATCTACAATCCCCTCAAACTGCCACTTG
CTTGGGACGGCAAGCCAATTCCCTACTGGCTTTACAAGCTGCATGGCCTG
GGGGTAGAGTATCCTTGCGAGATCTGCGGTAACTTTGTGTATATGGGCCG
TCGAGCTTTTGACAAGCATTTCTCAGAGGCCCTACATATCTTTGGTTTGA
AGTGTCTTGGTATCACTTCTAATACCAACCTTTTCCGTGAAATCACTCGG
ATTGAGGATGCAATCAGGCTTTGGGAGAAATTAGAGCAGGACCGCAAGAA
GGATAGAGATAATCGCGACAATGTGGTACAGATGGAGGACGCCGAAGGCA
ATGTGATGCCGGAGAGGATCTACCTTGAATGATTTTCGAGGAGCAACGGT
TTATCCACGAGGACCTTGAGCGCCTAGAGCAGGCGATTGCCGACCGCGTT
GCCGAAGAGCCTCGTAATTCTGCAAAAGCAAGGTATACTGTAAATTCGGG
ATCGCTTGGCTCGCGATCATGAAGTCGCACATTTCTTAAAGCGTATAGAA
GACCAGTCCAAGAGGTTGCTCGACATCTACAAGGATGCAGACGGCGCGCG
TGAGAAGGAAATCCAAACCATCTCAACCGGCGATCAATTCGAGGAGTTCT
ACAAGCAACTGGATGAGATCAAGGACTTCCATAAGCGCTACCCTAATGAG
CCAGTGGAAAACCTTGAACGGGCTTATAAGCGTCGTCAGCCCGGAGAGGG
TGAAGTAACGGGCATGGAGATCGACAATCTATTCACCGGTGAAGAGGGTT
ATGGACAGTTTCTGGACCTCACAACACTGCACGAAGACTACCTCAATTTG
CCTGGGGTCAAACGGCTCTCATATGTGCAATACCTCGACATATTCGATGC
GTTTACTCCTCCGCAACTTCCGATTAAGCGAAACAACAAACTTTCCGATC
GGTATTTCAAGTATGTCGGCGAACTTGCAAACTACTTGGAAAGCTTCATC
AAGAAAGTGAAGCCGTTACAAGATCTGGACAAACTTTTTGCTAGCTTTGA
TGAGGAGTTCGAGAAGCAATGGACGGCGAATCAGGTACCTGGTTGGACGG
AGGAGGTTGCTGAAAATGGTAACCAAGGTCCGAAGACCGAGGGCTCCGGA
GAAGGCATCTGGTGTGCTGACTGCGAGAGGGAATTCAAGAATGAGAATGT
CTATAAGAATCACTTGACAGGCAAAAAGCACATCCGGGCCGCTGAAGCTC
GCAAAGCTGCCGGGGATACTGGCGCGAAACCGGCAGCCCCTGCGACGAAC
GGCGCATCATCCGTGGCTCATCGTCTTAAGGAACGTGCAGTCGCAGAGAG
GGAACATCGGGTGCGTTCTCTGACGCAGGTACTGCAGCCCGAGCGTGTAG
CGACGAGGATGAACGTGGAGCGGAGACAGGGTATGACTGAACGGGAGCGC
CAAATGGAACTTGAAGCTCTGCTTAATGAGTCTGAGAACCCTGGCGGTGA
TCGTGCTGGCGATCAATCTGACGAGGACGACGAAGACCGAATCTACAATC
CCCTCAAACTGCCACTTGCTTGGGACGGCAAGCCAATTCCCTACTGGCTT
TACAAGCTGCATGGCCTGGGGGTAGAGTATCCTTGCGAGATCTGCGGTAA
CTTTGTGTATATGGGCCGTCGAGCTTTTGACAAGCATTTCTCAGAGGCCC
TACATATCTTTGGTTTGAAGTGTCTTGGTATCACTTCTAATACCAACCTT
TTCCGTGAAATCACTCGGATTGAGGATGCAATCAGGCTTTGGGAGAAATT
AGAGCAGGACCGCAAGAAGGATAGAGATAATCGCGACAATGTGGTACAGA
TGGAGGACGCCGAAGGCAATGTGATGCCGGAGAGGATCTACCTTGAATGA
TTTTCGAGGAGCAACGGTTTATCCACGAGGACCTTGAGCGCCTAGAGCAG
GCGATTGCCGACCGCGTTGCCGAAGAGCCTCGTAATTCTGCAAAAGCAAG
GTATACTGTAAATTCGGGATCGCTTGGCTCGCGATCATGAAGTCGCACAT
TTCTTAAAGCGTATAGAAGACCAGTCCAAGAGGTTGCTCGACATCTACAA
GGATGCAGACGGCGCGCGTGAGAAGGAAATCCAAACCATCTCAACCGGCG
ATCAATTCGAGGAGTTCTACAAGCAACTGGATGAGATCAAGGACTTCCAT
AAGCGCTACCCTAATGAGCCAGTGGAAAACCTTGAACGGGCTTATAAGCG
TCGTCAGCCCGGAGAGGGTGAAGTAACGGGCATGGAGATCGACAATCTAT
TCACCGGTGAAGAGGGTTATGGACAGTTTCTGGACCTCACAACACTGCAC
GAAGACTACCTCAATTTGCCTGGGGTCAAACGGCTCTCATATGTGCAATA
CCTCGACATATTCGATGCGTTTACTCCTCCGCAACTTCCGATTAAGCGAA
ACAACAAACTTTCCGATCGGTATTTCAAGTATGTCGGCGAACTTGCAAAC
TACTTGGAAAGCTTCATCAAGAAAGTGAAGCCGTTACAAGATCTGGACAA
ACTTTTTGCTAGCTTTGATGAGGAGTTCGAGAAGCAATGGACGGCGAATC
AGGTACCTGGTTGGACGGAGGAGGTTGCTGAAAATGGTAACCAAGGTCCG
AAGACCGAGGGCTCCGGAGAAGGCATCTGGTGTGCTGACTGCGAGAGGGA
ATTCAAGAATGAGAATGTCTATAAGAATCACTTGACAGGCAAAAAGCACA
TCCGGGCCGCTGAAGCTCGCAAAGCTGCCGGGGATACTGGCGCGAAACCG
GCAGCCCCTGCGACGAACGGCGCATCATCCGTGGCTCATCGTCTTAAGGA
ACGTGCAGTCGCAGAGAGGGAACATCGGGTGCGTTCTCTGACGCAGGTAC
TGCAGCCCGAGCGTGTAGCGACGAGGATGAACGTGGAGCGGAGACAGGGT
ATGACTGAACGGGAGCGCCAAATGGAACTTGAAGCTCTGCTTAATGAGTC
TGAGAACCCTGGCGGTGATCGTGCTGGCGATCAATCTGACGAGGACGACG
AAGACCGAATCTACAATCCCCTCAAACTGCCACTTGCTTGGGACGGCAAG
CCAATTCCCTACTGGCTTTACAAGCTGCATGGCCTGGGGGTAGAGTATCC
TTGCGAGATCTGCGGTAACTTTGTGTATATGGGCCGTCGAGCTTTTGACA
AGCATTTCTCAGAGGCCCTACATATCTTTGGTTTGAAGTGTCTTGGTATC
ACTTCTAATACCAACCTTTTCCGTGAAATCACTCGGATTGAGGATGCAAT
CAGGCTTTGGGAGAAATTAGAGCAGGACCGCAAGAAGGATAGAGATAATC
GCGACAATGTGGTACAGATGGAGGACGCCGAAGGCAATGTGATGCCGGAG
AGGATCTACCTTGAATGATTTTCGAGGAGCAACGGTTTATCCACGAGGAC
CTTGAGCGCCTAGAGCAGGCGATTGCCGACCGCGTTGCCGAAGAGCCTCG
TAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_293538M747DRAFT_293538Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293538-T1M747DRAFT_293538-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293538-T1.cdsM747DRAFT_293538-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293538-T1.utr3p1M747DRAFT_293538-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293538-T1.exon3M747DRAFT_293538-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_293538-T1.exon2M747DRAFT_293538-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_293538-T1.exon1M747DRAFT_293538-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293538-T1.utr5p1M747DRAFT_293538-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR021966
DBxrefInterPro:IPR031774
DBxrefInterPro:IPR024598
DBxrefInterPro:IPR022755
DBxrefPFAM:PF12874
DBxrefPFAM:PF12171
DBxrefPFAM:PF12108
DBxrefPFAM:PF16837
DBxrefPFAM:PF11931
Product subunit 3
Productsplicing factor 3a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851905.1supercontigKZ851905.1:204743..206714 -
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