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M747DRAFT_293645-T1, M747DRAFT_293645-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_293645-T1
Unique NameM747DRAFT_293645-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851905.1:554933..556626+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_293645-T1 ID=M747DRAFT_293645-T1|Name=M747DRAFT_293645-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1694bp|location=Sequence derived from alignment at KZ851905.1:554933..556626+ (Aspergillus niger ATCC 13496)
ACTCGATCCATAATATCATTTTACTACATCTCTACGGGCTCATACCGCTC
ACACAGCTCGATACTCTCCCACACTGCACTCTCTCTAAAATCGTTAACTC
GACAATGCTATGCTAAGATTCCTCCGCACCGCAATGGCCTCTCTAACTAC
TCCTCCCCGCGTCCCCATCCCCGCCAACGGGGTCGACTACCGTGGCAAAG
TAGTCCTGGCCCCTATGGTGCGCTCCGGCGAATTGCCCTCCCGCCTCATT
GCCCTCAAGTATGGCGCCGATCTAGTTTGGGGCCCTGAAACTATCGACCG
GGCTATGGCAGGCGCCATCCGCCGTGTGAACCCCCGCAACGGCACCATCG
AATTCACCCGCATGCCCTCCAACGGCGGCCGCACCGAAAAGGCAGGCCAA
GAATCCGTGATCTACCGTCTCGACCCCGTCCGCGAGAAAGGCAAACTCAT
TTATCAAATTGGCACTGCGACGCCTGAAATCGCCGTCCAAGCAGCCAAAC
TCGTCGCGGGCGATGTCGCCGGTATCGACGTGAACTCGGGATGTCCGAAA
CCCTTTAGCACGAGCGGTGGTATGGGTGCGGCGCTTCTCAAGACACCGGA
TAAGTTGGTTGCGATTCTGGAAGCCCTGGTGAAGGAGGTCGGGACGCCAT
TCCAGATCGGTATCTCGGTCAAGATCCGCATTTTGAAAGATCCCGAGGAG
ACGAGAGCTCTGGTGTCGCGGCTCGTGAAGACAGGCATTACGGGCTTGAC
AGTGCATTGTCGGACGCCGCCCATGAGGCCGCGTGAACGCGCTATCCGTG
ATCAGGTGCGCATGATTGCCGACATCTGTCATGAGGCTGGTGTCGCATGC
GTTATAAACGGTGATGTAACCTCCAAAGATGAGGGACACGCCTTGATGAA
AGAGTTCGGCGTCGACGGCGCGATGATCGCCACAGCCGCAGAAGCAAACC
CATCCTGCTTCCGTACCGAAGCCGAGGGCGGCCTTCTCCCCTGGAAGGAG
GTAGTCCACGAATATATCAAGTTCTGCCTCGAGTCTGAGAACCGCTTCGG
CAACTCCAAATATCTCCTCAACATCCTCGTCCCCGGCAAGCTCCAGGAAG
GCAAGCTTGCAAAGGCAGCCAGGTCCTATGCCGATACATGCCACGCCCTC
GGATTCGAGGATCTCCTTCCCCTCGCCATGCAAGTGGACGACATCCTCAA
CCTCACCGACAAGTCAGTCACTACCAAAGACCTCCAGTCCGAACACACCC
GCAGCAAGGCCGTTCAGAACGCCATGGAGAACAACGAATCCGCGCGGGCT
GCTGGCGGTGCTTCTCGCGTCAAGTCCACCTCCCCCGCAGTCAGCGCAGG
CGGCCCCATTCGCACGAACTCCATCCCAGCTCCTACGAAGACCAAGGCTG
AGGCGGAGACCCAGGCCGATGTCTCTGTTCCGGCTCCCGAAGCTGCGCCT
CAGAAGCAGGAGCTGACAGCTTAACTCTACTCCCTCTACCTGATGCCTCT
GCGTCCCTTGCGTCCTATTCTTGTTCTTCTTTCTTTATCTTTTCTTGGTT
ACCAAGCTACTGTCTCGCATTATCTGGTGTTGAATATCGGTTCCCCAATC
TCTGCATTTTTAAATAGATTCCCACGGTGTGTTGTTGATAGAGGCTCTCG
TGTTCCCAGGATTATACATACATAGTACTATACGAATATATACG
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Coding sequence (CDS) from alignment at KZ851905.1:554933..556626+

>M747DRAFT_293645-T1 ID=M747DRAFT_293645-T1|Name=M747DRAFT_293645-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1341bp|location=Sequence derived from alignment at KZ851905.1:554933..556626+ (Aspergillus niger ATCC 13496)
ATGGCCTCTCTAACTACTCCTCCCCGCGTCCCCATCCCCGCCAACGGGGT
CGACTACCGTGGCAAAGTAGTCCTGGCCCCTATGGTGCGCTCCGGCGAAT
TGCCCTCCCGCCTCATTGCCCTCAAGTATGGCGCCGATCTAGTTTGGGGC
CCTGAAACTATCGACCGGGCTATGGCAGGCGCCATCCGCCGTGTGAACCC
CCGCAACGGCACCATCGAATTCACCCGCATGCCCTCCAACGGCGGCCGCA
CCGAAAAGGCAGGCCAAGAATCCGTGATCTACCGTCTCGACCCCGTCCGC
GAGAAAGGCAAACTCATTTATCAAATTGGCACTGCGACGCCTGAAATCGC
CGTCCAAGCAGCCAAACTCGTCGCGGGCGATGTCGCCGGTATCGACGTGA
ACTCGGGATGTCCGAAACCCTTTAGCACGAGCGGTGGTATGGGTGCGGCG
CTTCTCAAGACACCGGATAAGTTGGTTGCGATTCTGGAAGCCCTGGTGAA
GGAGGTCGGGACGCCATTCCAGATCGGTATCTCGGTCAAGATCCGCATTT
TGAAAGATCCCGAGGAGACGAGAGCTCTGGTGTCGCGGCTCGTGAAGACA
GGCATTACGGGCTTGACAGTGCATTGTCGGACGCCGCCCATGAGGCCGCG
TGAACGCGCTATCCGTGATCAGGTGCGCATGATTGCCGACATCTGTCATG
AGGCTGGTGTCGCATGCGTTATAAACGGTGATGTAACCTCCAAAGATGAG
GGACACGCCTTGATGAAAGAGTTCGGCGTCGACGGCGCGATGATCGCCAC
AGCCGCAGAAGCAAACCCATCCTGCTTCCGTACCGAAGCCGAGGGCGGCC
TTCTCCCCTGGAAGGAGGTAGTCCACGAATATATCAAGTTCTGCCTCGAG
TCTGAGAACCGCTTCGGCAACTCCAAATATCTCCTCAACATCCTCGTCCC
CGGCAAGCTCCAGGAAGGCAAGCTTGCAAAGGCAGCCAGGTCCTATGCCG
ATACATGCCACGCCCTCGGATTCGAGGATCTCCTTCCCCTCGCCATGCAA
GTGGACGACATCCTCAACCTCACCGACAAGTCAGTCACTACCAAAGACCT
CCAGTCCGAACACACCCGCAGCAAGGCCGTTCAGAACGCCATGGAGAACA
ACGAATCCGCGCGGGCTGCTGGCGGTGCTTCTCGCGTCAAGTCCACCTCC
CCCGCAGTCAGCGCAGGCGGCCCCATTCGCACGAACTCCATCCCAGCTCC
TACGAAGACCAAGGCTGAGGCGGAGACCCAGGCCGATGTCTCTGTTCCGG
CTCCCGAAGCTGCGCCTCAGAAGCAGGAGCTGACAGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050660flavin adenine dinucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_293645M747DRAFT_293645Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293645-T1.utr5p1M747DRAFT_293645-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293645-T1.exon1M747DRAFT_293645-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293645-T1.cdsM747DRAFT_293645-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293645-T1.utr3p1M747DRAFT_293645-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293645-T1M747DRAFT_293645-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092628FW
DBxrefInterPro:IPR035587
DBxrefInterPro:IPR018517
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR001269
DBxrefPFAM:PF01207
ProductFMN-linked oxidoreductase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851905.1supercontigKZ851905.1:554933..556626 +
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