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M747DRAFT_293662-T1, M747DRAFT_293662-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_293662-T1
Unique NameM747DRAFT_293662-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851905.1:602345..603223-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_293662-T1 ID=M747DRAFT_293662-T1|Name=M747DRAFT_293662-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=879bp|location=Sequence derived from alignment at KZ851905.1:602345..603223- (Aspergillus niger ATCC 13496)
AGTTTCCAACCCCCTTGTAGGAAACCTCAATAAAAATGGCTAAGCTCTTC
ATCGGGTCTGTCAATTCTGTTTCCTTTTTGGCTACCCCGCCCCCAATATC
AGACTGACCAAAATCAGCGGCCTTGCCTGGCACACCACTGACGAGACCCT
CCGCGAGGGATTCTCGCAATACGGAACAATCGAAGAAGCCGTTGGTCATC
CATGTTTCGCGGAGCAATGAAAGTTCTCCCTTATCATGCTCGTATTGACC
AAACTCAGATCGTCGTCAAGGATCATGACACCCACCGCAGCCGTGGATTC
GGGTTTGTCCGCTTCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGC
CATGAACAACCAGGAGTAAGCAAGCTATCTAAATGCTCCTCTTTCCAGAC
ACTCACCACTTCAGATTCGACGGCCGTGTCATCCGTGTCGACAAAGCCTC
GGAGTCGAGACCGCGCATGGGTGGAGGTGGATTCCATGGACGCGGTGGCT
ACAACCGTGGCTACAACGGCGGCGGTGAGTTCTTCTTGGTCACTGCCATC
AAGGCCCTCTTAAATTATATATTGTATCATATAACTAACAAGAAGCAGGC
TGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGTAAGCTGCGCAAGC
TATTATAGCATTGCCGATGACTTACTGTGGACCGGTCTCTTGTCCTATTT
TTCATTTCTTTTCACGCTTTTTTCCCTCTTTCTCGCATGTCAGCTGCTGT
TAGTCCCTTCGGACTTAAAGTTTGGGATAAGAGCACGGGCGCATGCTACC
CAGCTTTTATGATGGTGACTTACGACGAAACGACCCCTGCCTCTAGTGTT
TTTTCCTCTATGATGTTTCCCCCCCTCTC
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Coding sequence (CDS) from alignment at KZ851905.1:602345..603223-

>M747DRAFT_293662-T1 ID=M747DRAFT_293662-T1|Name=M747DRAFT_293662-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1755bp|location=Sequence derived from alignment at KZ851905.1:602345..603223- (Aspergillus niger ATCC 13496)
GCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGTAAATTCGACGG
CCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGACCGCGCATGGGTG
GAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGCTACAACGGCGGC
GATCGTCGTCAAGGATCATGACACCCACCGCAGCCGTGGATTCGGGTTTG
TCCGCTTCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCATGAAC
AACCAGGACGGCCTTGCCTGGCACACCACTGACGAGACCCTCCGCGAGGG
ATTCTCGCAATACGGAACAATCGAAGAAGCCATGGCTAAGCTCTTCATCG
GGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGTAAATTCGACG
GCCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGACCGCGCATGGGT
GGAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGCTACAACGGCGG
CGATCGTCGTCAAGGATCATGACACCCACCGCAGCCGTGGATTCGGGTTT
GTCCGCTTCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCATGAA
CAACCAGGACGGCCTTGCCTGGCACACCACTGACGAGACCCTCCGCGAGG
GATTCTCGCAATACGGAACAATCGAAGAAGCCATGGCTAAGCTCTTCATC
GGGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGTAAATTCGAC
GGCCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGACCGCGCATGGG
TGGAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGCTACAACGGCG
GCGATCGTCGTCAAGGATCATGACACCCACCGCAGCCGTGGATTCGGGTT
TGTCCGCTTCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCATGA
ACAACCAGGACGGCCTTGCCTGGCACACCACTGACGAGACCCTCCGCGAG
GGATTCTCGCAATACGGAACAATCGAAGAAGCCATGGCTAAGCTCTTCAT
CGGGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGTAAATTCGA
CGGCCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGACCGCGCATGG
GTGGAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGCTACAACGGC
GGCGATCGTCGTCAAGGATCATGACACCCACCGCAGCCGTGGATTCGGGT
TTGTCCGCTTCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCATG
AACAACCAGGACGGCCTTGCCTGGCACACCACTGACGAGACCCTCCGCGA
GGGATTCTCGCAATACGGAACAATCGAAGAAGCCATGGCTAAGCTCTTCA
TCGGGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGTAAATTCG
ACGGCCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGACCGCGCATG
GGTGGAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGCTACAACGG
CGGCGATCGTCGTCAAGGATCATGACACCCACCGCAGCCGTGGATTCGGG
TTTGTCCGCTTCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCAT
GAACAACCAGGACGGCCTTGCCTGGCACACCACTGACGAGACCCTCCGCG
AGGGATTCTCGCAATACGGAACAATCGAAGAAGCCATGGCTAAGCTCTTC
ATCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_293662M747DRAFT_293662Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293662-T1M747DRAFT_293662-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293662-T1.cdsM747DRAFT_293662-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293662-T1.utr3p1M747DRAFT_293662-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293662-T1.exon5M747DRAFT_293662-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_293662-T1.exon4M747DRAFT_293662-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_293662-T1.exon3M747DRAFT_293662-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_293662-T1.exon2M747DRAFT_293662-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_293662-T1.exon1M747DRAFT_293662-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293662-T1.utr5p1M747DRAFT_293662-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductRNA-binding domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851905.1supercontigKZ851905.1:602345..603223 -
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