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M747DRAFT_293720-T1, M747DRAFT_293720-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_293720-T1
Unique NameM747DRAFT_293720-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851905.1:837647..838873-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_293720-T1 ID=M747DRAFT_293720-T1|Name=M747DRAFT_293720-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1227bp|location=Sequence derived from alignment at KZ851905.1:837647..838873- (Aspergillus niger ATCC 13496)
CGGACTCCGAAAACCACCTACCGCAACGCAAGAAAACTCCGTGCACCAAC
CCCCTTCTCCAAACACGGGCAAATAACAACAATGGCATCGACAATGAGAT
CCATGAGAAGGATCCTCACAAGGGCATCCCGCTCCGCCGTATCCCCAATT
GAACACACCGCCGCGCTCAGAACACCGGCCGGCCTCTTCTCCGCCAACCT
CAGAGCAGCCAACAACAGCAGCACCAGCAATGTAGGAGTTCGCCGCTCCT
TCTCAACTTCTCCGCTTTGTCTTCGCGCGCGCACAATGGGCCAATTGAAG
GCGCGGCACTCGACGGGCCCGTTCTCGTGGAAGGCGGCGCTGCTTTTCGT
TTTGACGGGTGGTGGTATGATCATTTACTTCCGGGTTGAGAAGGAGAGAT
TGGAGCGCAAGCGCATCGCGGAGATGAGTAAGGGTGTTGGGAAGCCGAAG
GTTGGAGGGCCGTTTACGTTGAAGGATCTGGATGGGAAGGAGTTTACGGC
GGAGGATTTGAAGGGGAAGTATAGTTTTGTGAGTATCTCATTCTTATAGG
GTTGGTTGTTATGATGAAGGGGATATTGGAGCTAATTGTGTTTGGTGTTC
TTGTTAGGTTTACTTTGGATTCACCCACTGCCCTGATATCTGCCCCGATG
AGCTGGACAAAATGGCCGAGATTATTGATAAGGTGAAGGAGGCTACGAAG
GGCGAGAATATCTTCCTGCCTGTGTTTATTACTTGCGACCCTGCCAGAGA
TACGCCTGAGGTGCTGCGCACCTATCTGAAGGAGTTCCACCCTGGTATTA
TTGGTTTGACTGGAACGTATGATGAGGTGAAGCATGTTTGCAAGCAGTAC
CGGGTGTACTTCAGTACCCCGAGGGATATTAAGCCCGGGGAGGATTATCT
GGTCGATCACAGCATCTATTTCTATTTGATGGGTATTTTCTCTCCTTATG
CAGCTTGGGGGATAGGTTGAGTGATGTGCGGCACGTGAGCTGACTTTTGT
TTGTTTGACAGATCCCGATAATGACTTCGTCGAGTGCATCGGTCGTCAGG
ACACGCCTGAGTCGGCTACGAGGACGATCATGGAACATATCAATGACTGG
AAGCGGGAGGGCAAGCCCCTTAAGAAGGACTAAGTGGTGATGTCTCTGCC
TGCCTAAATGTGTGTATCATAGACAATACCCTACTCTGTGATTGTAAAAT
AAGACTGTCAATTAGCATTCACCGTCC
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Coding sequence (CDS) from alignment at KZ851905.1:837647..838873-

>M747DRAFT_293720-T1 ID=M747DRAFT_293720-T1|Name=M747DRAFT_293720-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2682bp|location=Sequence derived from alignment at KZ851905.1:837647..838873- (Aspergillus niger ATCC 13496)
ATCCCGATAATGACTTCGTCGAGTGCATCGGTCGTCAGGACACGCCTGAG
TCGGCTACGAGGACGATCATGGAACATATCAATGACTGGAAGCGGGAGGG
CAAGCCCCTTAAGAAGGACTAAGTTTACTTTGGATTCACCCACTGCCCTG
ATATCTGCCCCGATGAGCTGGACAAAATGGCCGAGATTATTGATAAGGTG
AAGGAGGCTACGAAGGGCGAGAATATCTTCCTGCCTGTGTTTATTACTTG
CGACCCTGCCAGAGATACGCCTGAGGTGCTGCGCACCTATCTGAAGGAGT
TCCACCCTGGTATTATTGGTTTGACTGGAACGTATGATGAGGTGAAGCAT
GTTTGCAAGCAGTACCGGGTGTACTTCAGTACCCCGAGGGATATTAAGCC
CGGGGAGGATTATCTGGTCGATCACAGCATCTATTTCTATTTGATGGATG
GCATCGACAATGAGATCCATGAGAAGGATCCTCACAAGGGCATCCCGCTC
CGCCGTATCCCCAATTGAACACACCGCCGCGCTCAGAACACCGGCCGGCC
TCTTCTCCGCCAACCTCAGAGCAGCCAACAACAGCAGCACCAGCAATGTA
GGAGTTCGCCGCTCCTTCTCAACTTCTCCGCTTTGTCTTCGCGCGCGCAC
AATGGGCCAATTGAAGGCGCGGCACTCGACGGGCCCGTTCTCGTGGAAGG
CGGCGCTGCTTTTCGTTTTGACGGGTGGTGGTATGATCATTTACTTCCGG
GTTGAGAAGGAGAGATTGGAGCGCAAGCGCATCGCGGAGATGAGTAAGGG
TGTTGGGAAGCCGAAGGTTGGAGGGCCGTTTACGTTGAAGGATCTGGATG
GGAAGGAGTTTACGGCGGAGGATTTGAAGGGGAAGTATAGTTTTATCCCG
ATAATGACTTCGTCGAGTGCATCGGTCGTCAGGACACGCCTGAGTCGGCT
ACGAGGACGATCATGGAACATATCAATGACTGGAAGCGGGAGGGCAAGCC
CCTTAAGAAGGACTAAGTTTACTTTGGATTCACCCACTGCCCTGATATCT
GCCCCGATGAGCTGGACAAAATGGCCGAGATTATTGATAAGGTGAAGGAG
GCTACGAAGGGCGAGAATATCTTCCTGCCTGTGTTTATTACTTGCGACCC
TGCCAGAGATACGCCTGAGGTGCTGCGCACCTATCTGAAGGAGTTCCACC
CTGGTATTATTGGTTTGACTGGAACGTATGATGAGGTGAAGCATGTTTGC
AAGCAGTACCGGGTGTACTTCAGTACCCCGAGGGATATTAAGCCCGGGGA
GGATTATCTGGTCGATCACAGCATCTATTTCTATTTGATGGATGGCATCG
ACAATGAGATCCATGAGAAGGATCCTCACAAGGGCATCCCGCTCCGCCGT
ATCCCCAATTGAACACACCGCCGCGCTCAGAACACCGGCCGGCCTCTTCT
CCGCCAACCTCAGAGCAGCCAACAACAGCAGCACCAGCAATGTAGGAGTT
CGCCGCTCCTTCTCAACTTCTCCGCTTTGTCTTCGCGCGCGCACAATGGG
CCAATTGAAGGCGCGGCACTCGACGGGCCCGTTCTCGTGGAAGGCGGCGC
TGCTTTTCGTTTTGACGGGTGGTGGTATGATCATTTACTTCCGGGTTGAG
AAGGAGAGATTGGAGCGCAAGCGCATCGCGGAGATGAGTAAGGGTGTTGG
GAAGCCGAAGGTTGGAGGGCCGTTTACGTTGAAGGATCTGGATGGGAAGG
AGTTTACGGCGGAGGATTTGAAGGGGAAGTATAGTTTTATCCCGATAATG
ACTTCGTCGAGTGCATCGGTCGTCAGGACACGCCTGAGTCGGCTACGAGG
ACGATCATGGAACATATCAATGACTGGAAGCGGGAGGGCAAGCCCCTTAA
GAAGGACTAAGTTTACTTTGGATTCACCCACTGCCCTGATATCTGCCCCG
ATGAGCTGGACAAAATGGCCGAGATTATTGATAAGGTGAAGGAGGCTACG
AAGGGCGAGAATATCTTCCTGCCTGTGTTTATTACTTGCGACCCTGCCAG
AGATACGCCTGAGGTGCTGCGCACCTATCTGAAGGAGTTCCACCCTGGTA
TTATTGGTTTGACTGGAACGTATGATGAGGTGAAGCATGTTTGCAAGCAG
TACCGGGTGTACTTCAGTACCCCGAGGGATATTAAGCCCGGGGAGGATTA
TCTGGTCGATCACAGCATCTATTTCTATTTGATGGATGGCATCGACAATG
AGATCCATGAGAAGGATCCTCACAAGGGCATCCCGCTCCGCCGTATCCCC
AATTGAACACACCGCCGCGCTCAGAACACCGGCCGGCCTCTTCTCCGCCA
ACCTCAGAGCAGCCAACAACAGCAGCACCAGCAATGTAGGAGTTCGCCGC
TCCTTCTCAACTTCTCCGCTTTGTCTTCGCGCGCGCACAATGGGCCAATT
GAAGGCGCGGCACTCGACGGGCCCGTTCTCGTGGAAGGCGGCGCTGCTTT
TCGTTTTGACGGGTGGTGGTATGATCATTTACTTCCGGGTTGAGAAGGAG
AGATTGGAGCGCAAGCGCATCGCGGAGATGAGTAAGGGTGTTGGGAAGCC
GAAGGTTGGAGGGCCGTTTACGTTGAAGGATCTGGATGGGAAGGAGTTTA
CGGCGGAGGATTTGAAGGGGAAGTATAGTTTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005507copper ion binding
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0008535respiratory chain complex IV assembly
GO:0006878cellular copper ion homeostasis
GO:0006825copper ion transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_293720M747DRAFT_293720Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293720-T1M747DRAFT_293720-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293720-T1.cdsM747DRAFT_293720-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293720-T1.utr3p1M747DRAFT_293720-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293720-T1.exon3M747DRAFT_293720-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_293720-T1.exon2M747DRAFT_293720-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_293720-T1.exon1M747DRAFT_293720-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293720-T1.utr5p1M747DRAFT_293720-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264ENO
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR013766
DBxrefInterPro:IPR017276
DBxrefInterPro:IPR003782
DBxrefPFAM:PF02630
DBxrefPFAM:PF00578
ProductSCO1 protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851905.1supercontigKZ851905.1:837647..838873 -
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