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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851906.1:130731..132173+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_293822-T1 ID=M747DRAFT_293822-T1|Name=M747DRAFT_293822-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1443bp|location=Sequence derived from alignment at KZ851906.1:130731..132173+ (Aspergillus niger ATCC 13496)
TTGACCATTTCGCAATTCTTATCGTCAAGCTCGTCCTCTCCCAGTCACTC
TTTCACAGAAGAAATGGTGACGGAGGAACAGTCGGCTCCGCCACCCGAAC
GCGGGATGAGCACGCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGAG
CAATTGCGGAGAATAGTACATACTATGATCACGGTTCCTCTAGTTCGGAG
CTGACACGATATTGAATCCAGGAAAACAATCGCCAGAAAGCCATAGCAAT
ACGAGAACAACGCGAAGCCGAACAAGCTCGAGCTCACAATGCTGATCCTT
CGTCCACCAAAGGTGTCAAGCGAACCTACTCCTCCATGACTGCCTCCGAT
CCTCCGGCGACTCTGCGCGATGCGGCCTCTACAGATAATCGCCCCCTAGA
TGGCATCAAGCCGGCGCGCAACTTTACCAAATTCGTTGAATACGACTTCT
CCAAGATCACCGACACGAAGGGTGGGTTCTTGACCGAAGAGGATGACCGC
TACAACAAAGCCCTTCATGTTCGGGATGAGAAGGCGGAGCAGAAGCCAGC
GCACATGACGCAGAAGGAATGGGAGCGACAACAGCTGCTAAAGAATCTCC
ATCGAGATCGTGCAGGACCCTTCGAACCGGGGCTCAGTGTGTTGGATGAG
CGGACACGACAGAAAACGTGCCGAGAGTGTGGCAGCTTAGAAATCGACTG
GAAATGGGAAGAAGCGCTCCGGTGCTGTGTCTGCCATGCTTGCAAGGATA
AATTTCCGGAGAAATACAGTCTACTTACCAAGACCGAGGCACGAGAGGAC
TACCTCCTGACCAATCGTGAGTATCCCCCTGCACAGGTTTGCGGCATGGT
TTGCCACTGAGCGTTCGCTGACCACGGGCCCAACTGCAGCCGAACTTCAG
GATGAGGAACTCCTCCCACACCTGGAGCGCCCGAATCCGCATAAATCAAC
GTGGAATAACATGATGCTGTACCTACGGTATCAGGTCGAAGAGTACGCCT
TTTCCGCCAAGAAATGGGGCTCACCCGAAGCCTTGGACGCGGAGTTTGAG
CGACGCGAGAATGAGAAGAAGCGCCGGCGGGAGGTCAAATTCAAGAGCAA
ACTTGAAGACCTTAAGAAGCGTACGCGAGTCGATGCATACCGACGTAGCC
GGCAAGGAGCGACCGGTGGTAATTTTGGAGATGACCTGGGGGGTGGTGGA
CGACATGTACATCAGTGGGGAAGATCGGTCGAAGATCCCAAGACGGGGAT
TGGGGTCAAGAAATGCGTTGACTGCGGGATGGAAGTCGAAGAACTCGAGT
TCTAAATCATCAATGAACATCTTCCTGTACATACAAAGTCGTCGCATTGT
CCTGTCATTCTGCACTTATCCGAGACTCCGAGTGTACGTCGACTCGGTTG
CCAATTCCTGCCTCAGGTAGATACCGCAAAGCGCCAAGCGACC back to topCoding sequence (CDS) from alignment at KZ851906.1:130731..132173+ >M747DRAFT_293822-T1 ID=M747DRAFT_293822-T1|Name=M747DRAFT_293822-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1794bp|location=Sequence derived from alignment at KZ851906.1:130731..132173+ (Aspergillus niger ATCC 13496)
ATGACTGCCTCCGATCCTCCGGCGACTCTGCGCGATGCGGCCTCTACAGA
TAATCGCCCCCTAGATGGCATCAAGCCGGCGCGCAACTTTACCAAATTCG
TTGAATACGACTTCTCCAAGATCACCGACACGAAGGGTGGGTTCTTGACC
GAAGAGGATGACCGCTACAACAAAGCCCTTCATGTTCGGGATGAGAAGGC
GGAGCAGAAGCCAGCGCACATGACGCAGAAGGAATGGGAGCGACAACAGC
TGCTAAAGAATCTCCATCGAGATCGTGCAGGACCCTTCGAACCGGGGCTC
AGTGTGTTGGATGAGCGGACACGACAGAAAACGTGCCGAGAGTGTGGCAG
CTTAGAAATCGACTGGAAATGGGAAGAAGCGCTCCGGTGCTGTGTCTGCC
ATGCTTGCAAGGATAAATTTCCGGAGAAATACAGTCTACTTACCAAGACC
GAGGCACGAGAGGACTACCTCCTGACCAATCCCGAACTTCAGGATGAGGA
ACTCCTCCCACACCTGGAGCGCCCGAATCCGCATAAATCAACGTGGAATA
ACATGATGCTGTACCTACGGTATCAGGTCGAAGAGTACGCCTTTTCCGCC
AAGAAATGGGGCTCACCCGAAGCCTTGGACGCGGAGTTTGAGCGACGCGA
GAATGAGAAGAAGCGCCGGCGGGAGGTCAAATTCAAGAGCAAACTTGAAG
ACCTTAAGAAGCGTACGCGAGTCGATGCATACCGACGTAGCCGGCAAGGA
GCGACCGGTGGTAATTTTGGAGATGACCTGGGGGGTGGTGGACGACATGT
ACATCAGTGGGGAAGATCGGTCGAAGATCCCAAGACGGGGATTGGGGTCA
AGAAATGCGTTGACTGCGGGATGGAAGTCGAAGAACTCGAGTTCTAAATG
ACTGCCTCCGATCCTCCGGCGACTCTGCGCGATGCGGCCTCTACAGATAA
TCGCCCCCTAGATGGCATCAAGCCGGCGCGCAACTTTACCAAATTCGTTG
AATACGACTTCTCCAAGATCACCGACACGAAGGGTGGGTTCTTGACCGAA
GAGGATGACCGCTACAACAAAGCCCTTCATGTTCGGGATGAGAAGGCGGA
GCAGAAGCCAGCGCACATGACGCAGAAGGAATGGGAGCGACAACAGCTGC
TAAAGAATCTCCATCGAGATCGTGCAGGACCCTTCGAACCGGGGCTCAGT
GTGTTGGATGAGCGGACACGACAGAAAACGTGCCGAGAGTGTGGCAGCTT
AGAAATCGACTGGAAATGGGAAGAAGCGCTCCGGTGCTGTGTCTGCCATG
CTTGCAAGGATAAATTTCCGGAGAAATACAGTCTACTTACCAAGACCGAG
GCACGAGAGGACTACCTCCTGACCAATCCCGAACTTCAGGATGAGGAACT
CCTCCCACACCTGGAGCGCCCGAATCCGCATAAATCAACGTGGAATAACA
TGATGCTGTACCTACGGTATCAGGTCGAAGAGTACGCCTTTTCCGCCAAG
AAATGGGGCTCACCCGAAGCCTTGGACGCGGAGTTTGAGCGACGCGAGAA
TGAGAAGAAGCGCCGGCGGGAGGTCAAATTCAAGAGCAAACTTGAAGACC
TTAAGAAGCGTACGCGAGTCGATGCATACCGACGTAGCCGGCAAGGAGCG
ACCGGTGGTAATTTTGGAGATGACCTGGGGGGTGGTGGACGACATGTACA
TCAGTGGGGAAGATCGGTCGAAGATCCCAAGACGGGGATTGGGGTCAAGA
AATGCGTTGACTGCGGGATGGAAGTCGAAGAACTCGAGTTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003684 | damaged DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006289 | nucleotide-excision repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092641G3 |
| DBxref | InterPro:IPR009061 |
| DBxref | InterPro:IPR000465 |
| DBxref | InterPro:IPR022656 |
| DBxref | InterPro:IPR037129 |
| DBxref | PFAM:PF05181 |
| Product | DNA repair protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851906.1 | supercontig | KZ851906.1:130731..132173 + |
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