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M747DRAFT_293827-T1, M747DRAFT_293827-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_293827-T1
Unique NameM747DRAFT_293827-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851906.1:146964..149163+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_293827-T1 ID=M747DRAFT_293827-T1|Name=M747DRAFT_293827-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2200bp|location=Sequence derived from alignment at KZ851906.1:146964..149163+ (Aspergillus niger ATCC 13496)
TTTTTTTTTTCTCTCCCTCATCCCTGCCTCATTGCTGCCTGCTCGTTCTT
CGCAGCATTATATACTCTCTTTCTCCGATCCACGGCCATCGAAATATGCC
CTTTGCATCCTGCCATTCCTCCCTGTCCTGTCGATTCTGACCTCCCTTGA
CCTTTCTACCTCCGCCGCAAATCCCCTCCGGTCTCCCGCATCAAAAATGG
CCGCCGCTGTCGCCAACGGCCATACCACCCCCTCCGCCGATGTCGCCAAA
CAGCGCAGGCTGATCCACCACCATGCCGATGTCGTGATTGTGGGCGCCGG
GATCCTAGGTTGTGCATTGGCGGTCGCACTTGGAAGACAAGGGCGCAGCG
TCCTGCTGCTGGAGGCGTCCATGAAGGAGCCTGACCGGATCGTGGGAGAG
TTACTACAGCCTGGCGGTGTCGAGGCGCTTGAGAAACTGGGTCTTGCTGA
TTGTCTCGAAGACATTGATGCCATCCCAGCGAAAGGCTACCATGTGACAT
ACTTTGGGAAACCCGTCTCGTTCACCTACCCCAAAGCCTCCCCGTCGTCG
CCCGCCCCGCAAGGGCGTTGTTTCCACCATGGCCGCTTCGTCATGAAGCT
GCGAGCTGCTGCGCTGGCCTGTCCCAATGTCACAGTGGTGGAGACCAAGG
CCACCGACTTGGTCACTTGCTCCCACACCAAGCAGGTTCTTGGTGTCGAG
TGTGTGACCGGCGACATGAAGGATTGCTACTTTGGCCATCTTACGGTGGT
GGCCGATGGCTACGCCTCCAAACTCCGCAAGCAATACCATTCCAATACTC
CCAAGGTCCGCTCCAGGTTCTGGGGCTTGGAATTGATCGATGCAGACCTT
CCCAAGCCTTATCATGGCCACGTCCTCCTTAGCGACAATGCCCCTATCCT
CGTCTACCAAATTGGCACCCATGAAACCCGCATCCTCATCGACATCCCAG
AGAACCTCCCGTCGGCCTCCGTCAAGAACGGCGGCGTCAAGAACCACCTT
CGCAACGTCGTTCTCCCGTCCCTTCCCGAATGCATTCAGCCTTCATTCGT
AGCTGCGTTGGACAAGGGTCAGCTGCGGTCAATGCCGAACTCATATCTGC
CTAGTACCCCGAACAAGACTCCCGGTCTGGTCATCCTGGGCGATGCGCTC
AACATGCGGCATCCGCTGACCGGTGGAGGAATGACCGTCGCATTCAACGA
CGTTGTGGTCCTTCGTGATCTGCTGAGTCCGGAGAAGGTCCCTTCCCTCG
CTAATCATGAGCGCGTCCTGCAACAGCTGTCCTCCTTCCGTTGGCAACGG
AAGAAAACATGTTCAGTCATCAACATTTTGGCGCAGGCTCTCTATGCCTT
GTTTGCTGCTAAAGGTTCGTTTTACATTGTTTCCCATCCATCACACCCAG
CGTCCCAGCAGCTAACGCCAGACCCCACTGGGGCAAATCTAGACGAGAAT
ATGCGTGCTCTCCAACGGGGCTGCTTCCGTTACTTTGAGTTAGGAATGAC
CAGCGGGCCCATAGGTCTTCTGGGTGGACTGATCAAAAAGCCGGACGTTC
TATTCTGGCATTTCTTCAGTGTCGCCTTTCTCTCTCTGTGGCTCGTCATC
ACCGAGCCACCTTTCTACAAGCTGCCTCTGGCTTTGTTGAAATGCATTAT
GGTCTTTTGGACAGCATGCGTCGTGATCTTCCCCTACATGCTGATAGAGG
CATTCTGCTAGATGGGAATTATCACCGCTGCCGTCACCACTACCACCCCT
ACCATCATCATTCTCACTCACATGCCATCCCATATATCTTTACCCTACCC
GCTTATTCATACCTAATGAACCCGCACCGGATTGATTCATTTCAATGAGT
TGCAAGTGCCGAAGAAGCCATGACCACCTATCCCGTACATATGTATTTAT
CTCATCTGATTATCACCTTTCTCCTGTCATATATTGCTTGTGTTACCTTT
TAATATCGCCCTTTCTTGCTTCTGATCCTACATGTACTATTAGAAATCTA
TTTTGTTGTCTTCTTCTTGTTTCATTACTACCTATGTTGTTCCTAGATTC
TATCTACGGTGGAAGTGATCGCTTGTCTCATCTCGAAAGATAGCAAGCGT
CTGAAACCTGTAGAACTAGTGGTCCTTTTTACTTCTGTACATCTTTTAAC
CGATCAACCGAGTTATATTATGGGTTCATACTATCAATACTAGACATTCG
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Coding sequence (CDS) from alignment at KZ851906.1:146964..149163+

>M747DRAFT_293827-T1 ID=M747DRAFT_293827-T1|Name=M747DRAFT_293827-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2874bp|location=Sequence derived from alignment at KZ851906.1:146964..149163+ (Aspergillus niger ATCC 13496)
ATGGCCGCCGCTGTCGCCAACGGCCATACCACCCCCTCCGCCGATGTCGC
CAAACAGCGCAGGCTGATCCACCACCATGCCGATGTCGTGATTGTGGGCG
CCGGGATCCTAGGTTGTGCATTGGCGGTCGCACTTGGAAGACAAGGGCGC
AGCGTCCTGCTGCTGGAGGCGTCCATGAAGGAGCCTGACCGGATCGTGGG
AGAGTTACTACAGCCTGGCGGTGTCGAGGCGCTTGAGAAACTGGGTCTTG
CTGATTGTCTCGAAGACATTGATGCCATCCCAGCGAAAGGCTACCATGTG
ACATACTTTGGGAAACCCGTCTCGTTCACCTACCCCAAAGCCTCCCCGTC
GTCGCCCGCCCCGCAAGGGCGTTGTTTCCACCATGGCCGCTTCGTCATGA
AGCTGCGAGCTGCTGCGCTGGCCTGTCCCAATGTCACAGTGGTGGAGACC
AAGGCCACCGACTTGGTCACTTGCTCCCACACCAAGCAGGTTCTTGGTGT
CGAGTGTGTGACCGGCGACATGAAGGATTGCTACTTTGGCCATCTTACGG
TGGTGGCCGATGGCTACGCCTCCAAACTCCGCAAGCAATACCATTCCAAT
ACTCCCAAGGTCCGCTCCAGGTTCTGGGGCTTGGAATTGATCGATGCAGA
CCTTCCCAAGCCTTATCATGGCCACGTCCTCCTTAGCGACAATGCCCCTA
TCCTCGTCTACCAAATTGGCACCCATGAAACCCGCATCCTCATCGACATC
CCAGAGAACCTCCCGTCGGCCTCCGTCAAGAACGGCGGCGTCAAGAACCA
CCTTCGCAACGTCGTTCTCCCGTCCCTTCCCGAATGCATTCAGCCTTCAT
TCGTAGCTGCGTTGGACAAGGGTCAGCTGCGGTCAATGCCGAACTCATAT
CTGCCTAGTACCCCGAACAAGACTCCCGGTCTGGTCATCCTGGGCGATGC
GCTCAACATGCGGCATCCGCTGACCGGTGGAGGAATGACCGTCGCATTCA
ACGACGTTGTGGTCCTTCGTGATCTGCTGAGTCCGGAGAAGGTCCCTTCC
CTCGCTAATCATGAGCGCGTCCTGCAACAGCTGTCCTCCTTCCGTTGGCA
ACGGAAGAAAACATGTTCAGTCATCAACATTTTGGCGCAGGCTCTCTATG
CCTTGTTTGCTGCTAAAGACGAGAATATGCGTGCTCTCCAACGGGGCTGC
TTCCGTTACTTTGAGTTAGGAATGACCAGCGGGCCCATAGGTCTTCTGGG
TGGACTGATCAAAAAGCCGGACGTTCTATTCTGGCATTTCTTCAGTGTCG
CCTTTCTCTCTCTGTGGCTCGTCATCACCGAGCCACCTTTCTACAAGCTG
CCTCTGGCTTTGTTGAAATGCATTATGGTCTTTTGGACAGCATGCGTCGT
GATCTTCCCCTACATGCTGATAGAGGCATTCTGCTAGATGGCCGCCGCTG
TCGCCAACGGCCATACCACCCCCTCCGCCGATGTCGCCAAACAGCGCAGG
CTGATCCACCACCATGCCGATGTCGTGATTGTGGGCGCCGGGATCCTAGG
TTGTGCATTGGCGGTCGCACTTGGAAGACAAGGGCGCAGCGTCCTGCTGC
TGGAGGCGTCCATGAAGGAGCCTGACCGGATCGTGGGAGAGTTACTACAG
CCTGGCGGTGTCGAGGCGCTTGAGAAACTGGGTCTTGCTGATTGTCTCGA
AGACATTGATGCCATCCCAGCGAAAGGCTACCATGTGACATACTTTGGGA
AACCCGTCTCGTTCACCTACCCCAAAGCCTCCCCGTCGTCGCCCGCCCCG
CAAGGGCGTTGTTTCCACCATGGCCGCTTCGTCATGAAGCTGCGAGCTGC
TGCGCTGGCCTGTCCCAATGTCACAGTGGTGGAGACCAAGGCCACCGACT
TGGTCACTTGCTCCCACACCAAGCAGGTTCTTGGTGTCGAGTGTGTGACC
GGCGACATGAAGGATTGCTACTTTGGCCATCTTACGGTGGTGGCCGATGG
CTACGCCTCCAAACTCCGCAAGCAATACCATTCCAATACTCCCAAGGTCC
GCTCCAGGTTCTGGGGCTTGGAATTGATCGATGCAGACCTTCCCAAGCCT
TATCATGGCCACGTCCTCCTTAGCGACAATGCCCCTATCCTCGTCTACCA
AATTGGCACCCATGAAACCCGCATCCTCATCGACATCCCAGAGAACCTCC
CGTCGGCCTCCGTCAAGAACGGCGGCGTCAAGAACCACCTTCGCAACGTC
GTTCTCCCGTCCCTTCCCGAATGCATTCAGCCTTCATTCGTAGCTGCGTT
GGACAAGGGTCAGCTGCGGTCAATGCCGAACTCATATCTGCCTAGTACCC
CGAACAAGACTCCCGGTCTGGTCATCCTGGGCGATGCGCTCAACATGCGG
CATCCGCTGACCGGTGGAGGAATGACCGTCGCATTCAACGACGTTGTGGT
CCTTCGTGATCTGCTGAGTCCGGAGAAGGTCCCTTCCCTCGCTAATCATG
AGCGCGTCCTGCAACAGCTGTCCTCCTTCCGTTGGCAACGGAAGAAAACA
TGTTCAGTCATCAACATTTTGGCGCAGGCTCTCTATGCCTTGTTTGCTGC
TAAAGACGAGAATATGCGTGCTCTCCAACGGGGCTGCTTCCGTTACTTTG
AGTTAGGAATGACCAGCGGGCCCATAGGTCTTCTGGGTGGACTGATCAAA
AAGCCGGACGTTCTATTCTGGCATTTCTTCAGTGTCGCCTTTCTCTCTCT
GTGGCTCGTCATCACCGAGCCACCTTTCTACAAGCTGCCTCTGGCTTTGT
TGAAATGCATTATGGTCTTTTGGACAGCATGCGTCGTGATCTTCCCCTAC
ATGCTGATAGAGGCATTCTGCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004506squalene monooxygenase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_293827M747DRAFT_293827Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293827-T1.utr5p1M747DRAFT_293827-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293827-T1.exon1M747DRAFT_293827-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_293827-T1.exon2M747DRAFT_293827-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293827-T1.cdsM747DRAFT_293827-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293827-T1.utr3p1M747DRAFT_293827-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293827-T1M747DRAFT_293827-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261M4S
DBxrefInterPro:IPR013698
DBxrefInterPro:IPR036188
DBxrefPFAM:PF08491
DBxrefPFAM:PF01494
ProductSE-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851906.1supercontigKZ851906.1:146964..149163 +
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