You are here

Home

M747DRAFT_294266-T1, M747DRAFT_294266-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_294266-T1
Unique NameM747DRAFT_294266-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:829790..830788+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_294266-T1 ID=M747DRAFT_294266-T1|Name=M747DRAFT_294266-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=999bp|location=Sequence derived from alignment at KZ851907.1:829790..830788+ (Aspergillus niger ATCC 13496)
TCCTCATCCCCCACCCAAGCTTCGAAAGAGACCTTCACAATGGCCGCCAA
CGTTTCCAGCGACCTCATCTGGCAGCTCACCCGTACGTCACTAGCACCTT
TTTACGCATATCTTATCCATTATCCCAATGGAAACCCTAGGAGCCGTTTC
GCGCCTCGTCTTCCCCGGCTAATGTTACGACTACCTCAACAGGCACCCAG
AATGCTTTTCTGGTCAAGCGTAACAGCGGCGGTGGTTCTCAGTTCTCCCG
TGACCCCCTGAACTTGCAGAACAAGCACTCTTTCAAGGTACGAACCCTGA
ACGCAAGGTCTGGGTCATGTTTTCGTGCTAATCTCAAATCACCTGCTTAG
TACGCCGGCTATGCCAACACCAAGGTACTTTACCCGCGCTTCATGCCATA
GAGATTCTTCTGTCAGGGATTGGATGTTTAACGCTGCAACAACAGGCGGT
TGGTGTCCAGGCCACCGAGAACGGCGGTGTTGCTGTCATCACCAAGAAGC
CCAGCAACCCCCAGCAGCCTGCCAAGAACGTCGTTACCGTGACCTACGGC
CCTAACGCCTCCACCCGCAAGTAAGTCAATATGAGCAGTTGGCGTGCTGT
GATGTCCGTGAGGGAGGCGCGACAGTCTGCTGATACTGCTCTCGCATAGG
ATCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACGGCTACCGCGCTGA
TATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCAGA
AGGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCAGA
AAGGCCGAGGAGAAGTCGGAGTAAATGCCAACTTTTCAATTCGGGAAGGG
CTAGGAAGCATGATGTCATGAGAGCTGGTCGGGATGACCAGAATAGCGCC
GTGCTGGCCAAGGGCGGTAACATCTATGTAATTTAGCAATACTGCTACCA
GGCGGGCATTGTTCTCCGGCCAGGCCATTCAGAATGGAAACCAAAAAAA
back to top

Coding sequence (CDS) from alignment at KZ851907.1:829790..830788+

>M747DRAFT_294266-T1 ID=M747DRAFT_294266-T1|Name=M747DRAFT_294266-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2310bp|location=Sequence derived from alignment at KZ851907.1:829790..830788+ (Aspergillus niger ATCC 13496)
ATGGCCGCCAACGTTTCCAGCGACCTCATCTGGCAGCTCACCCGCACCCA
GAATGCTTTTCTGGTCAAGCGTAACAGCGGCGGTGGTTCTCAGTTCTCCC
GTGACCCCCTGAACTTGCAGAACAAGCACTCTTTCAAGTACGCCGGCTAT
GCCAACACCAAGGCGGTTGGTGTCCAGGCCACCGAGAACGGCGGTGTTGC
TGTCATCACCAAGAAGCCCAGCAACCCCCAGCAGCCTGCCAAGAACGTCG
TTACCGTGACCTACGGCCCTAACGCCTCCACCCGCAAGATCTACAAGGGT
GTTGCCGACAAGACTGCCAAGAACGGCTACCGCGCTGATATCCGTGAGGA
CGCTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCAGAAGGCCAAGAAGG
AGACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCAGAAAGGCCGAGGAG
AAGTCGGAGTAAATGGCCGCCAACGTTTCCAGCGACCTCATCTGGCAGCT
CACCCGCACCCAGAATGCTTTTCTGGTCAAGCGTAACAGCGGCGGTGGTT
CTCAGTTCTCCCGTGACCCCCTGAACTTGCAGAACAAGCACTCTTTCAAG
TACGCCGGCTATGCCAACACCAAGGCGGTTGGTGTCCAGGCCACCGAGAA
CGGCGGTGTTGCTGTCATCACCAAGAAGCCCAGCAACCCCCAGCAGCCTG
CCAAGAACGTCGTTACCGTGACCTACGGCCCTAACGCCTCCACCCGCAAG
ATCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACGGCTACCGCGCTGA
TATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCAGA
AGGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCAGA
AAGGCCGAGGAGAAGTCGGAGTAAATGGCCGCCAACGTTTCCAGCGACCT
CATCTGGCAGCTCACCCGCACCCAGAATGCTTTTCTGGTCAAGCGTAACA
GCGGCGGTGGTTCTCAGTTCTCCCGTGACCCCCTGAACTTGCAGAACAAG
CACTCTTTCAAGTACGCCGGCTATGCCAACACCAAGGCGGTTGGTGTCCA
GGCCACCGAGAACGGCGGTGTTGCTGTCATCACCAAGAAGCCCAGCAACC
CCCAGCAGCCTGCCAAGAACGTCGTTACCGTGACCTACGGCCCTAACGCC
TCCACCCGCAAGATCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACGG
CTACCGCGCTGATATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATCC
GCCGCTCCCAGAAGGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGGT
GCTAAGGCCAGAAAGGCCGAGGAGAAGTCGGAGTAAATGGCCGCCAACGT
TTCCAGCGACCTCATCTGGCAGCTCACCCGCACCCAGAATGCTTTTCTGG
TCAAGCGTAACAGCGGCGGTGGTTCTCAGTTCTCCCGTGACCCCCTGAAC
TTGCAGAACAAGCACTCTTTCAAGTACGCCGGCTATGCCAACACCAAGGC
GGTTGGTGTCCAGGCCACCGAGAACGGCGGTGTTGCTGTCATCACCAAGA
AGCCCAGCAACCCCCAGCAGCCTGCCAAGAACGTCGTTACCGTGACCTAC
GGCCCTAACGCCTCCACCCGCAAGATCTACAAGGGTGTTGCCGACAAGAC
TGCCAAGAACGGCTACCGCGCTGATATCCGTGAGGACGCTGTCGCCCGCG
TCAGCGCCATCCGCCGCTCCCAGAAGGCCAAGAAGGAGACTCCCGCTCAG
AAGCCCCGCGGTGCTAAGGCCAGAAAGGCCGAGGAGAAGTCGGAGTAAAT
GGCCGCCAACGTTTCCAGCGACCTCATCTGGCAGCTCACCCGCACCCAGA
ATGCTTTTCTGGTCAAGCGTAACAGCGGCGGTGGTTCTCAGTTCTCCCGT
GACCCCCTGAACTTGCAGAACAAGCACTCTTTCAAGTACGCCGGCTATGC
CAACACCAAGGCGGTTGGTGTCCAGGCCACCGAGAACGGCGGTGTTGCTG
TCATCACCAAGAAGCCCAGCAACCCCCAGCAGCCTGCCAAGAACGTCGTT
ACCGTGACCTACGGCCCTAACGCCTCCACCCGCAAGATCTACAAGGGTGT
TGCCGACAAGACTGCCAAGAACGGCTACCGCGCTGATATCCGTGAGGACG
CTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCAGAAGGCCAAGAAGGAG
ACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCAGAAAGGCCGAGGAGAA
GTCGGAGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_294266M747DRAFT_294266Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294266-T1M747DRAFT_294266-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294266-T1.utr5p1M747DRAFT_294266-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294266-T1.exon1M747DRAFT_294266-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_294266-T1.exon2M747DRAFT_294266-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_294266-T1.exon3M747DRAFT_294266-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_294266-T1.exon4M747DRAFT_294266-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_294266-T1.exon5M747DRAFT_294266-T1.exon5Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294266-T1.cdsM747DRAFT_294266-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294266-T1.utr3p1M747DRAFT_294266-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029004
DBxrefPFAM:PF01778
Productribosomal protein L28e
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:829790..830788 +
Powered by Drupal