You are here

Home

M747DRAFT_294382-T1, M747DRAFT_294382-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_294382-T1
Unique NameM747DRAFT_294382-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851908.1:401995..404314-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_294382-T1 ID=M747DRAFT_294382-T1|Name=M747DRAFT_294382-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2320bp|location=Sequence derived from alignment at KZ851908.1:401995..404314- (Aspergillus niger ATCC 13496)
GACTTCATCATCCAATTCTCCCCTCCTCTCCCTCCCTTTTCTGTTTACCC
TTCCTCTCTCTACCCCCGGACGAGCTACCCCCTACATACCCCTCCAGCTT
GTTCTCACTCCGAACTACTTCCGACGCTATCAACCCCAACCTCTCTACCG
CACTCATACTCTGATCATCCACACATCCACCCATCATGCCTCCGAAAGGT
GCTCCCCGACGAGGAGCACCGGCCGGCGCAGCCAGCCGCGCCAATGCATC
TACAACCGCCTCCGCGAGTCCCGCGCCCAGCGCCACCACCACGGGCGACT
CCCAGACTCCAACACCCGGCCCATCAGCCTCCGGGCGAGCCCCCGTCCAG
CGCCTTCAATCGCTCAAGAAACGCACACCCTCCGGCAGCATCGGACCGGC
CGCGAAACCCCCCGGCGCGCCCGCTGCGCCCGGCGAACCTGCCAAGCCCA
CACTCAAATACAAGCCGCGCGCCGTCGGCCGTCGCAGCAAGGAGGAGCGA
GAAGCCATCGAGAAGCTCGAAGCCGAGCGGCACCGCGAGCGCCTGAAGGA
GGCGGCGGCGATTCAGCGCGGCCGGGATCAAGGCGGTCCTGGTGGTCGCG
GTGGGTTTGGGCGCGGGCGTGGCGGACCTTTGGGGTCTGCGGGCGGGCCA
TTGGGCTCGGGGATGTCTGGGCGTCGGGGTAGAGGAGGACGGTTTGGACA
GGATTCGAGACATTCGTCTATGTCGAGACGCAGTCGGTCGGTCATTGATC
TGGGAAATACGGCGGCGGGTGCGGGGACGCGCGATTACTCGTCGGATGAG
AGTGATGGCGAGGTGCGCATCAGTATTGACCAGATCAATTTGGATAGTGA
TGAGGAGGATCAGGAGCAGATGATGGTCGATAGCAAGAAGGGGAAGGCGG
CGGTTAAGTATGCCGATGCTGAGAAGGGGTTACGGCCTATTCGCGTCGAG
AGACATGAGCATGAGGAGCGCGTGGTCAGTGTCAATATGGAGTCGAGCTC
GAGCAAGTCGGCGGAGCTGAGGGAGAAGGCTAAGGCGCAGGCGAAGGAGG
ATGATGGTGCGCTCTTTGTGCAGCAGAATGATGATGATGCTGCGGCTACT
ACGGAAGGAGAGCCCAAGGTCAAGTCTGAGCCTACGGATGATGATGATCA
GGTCATGACAGATGTTCCGCATGCCGAGGAGCCAGCTACGACGGATGATG
GATTGCTGCCGGTACAGAAGGTCAAGGTGCGCAGGAAAATCACACCCCCG
TCGAACGAGGCGACACCCCAGCCCGAAATGGAGATCCCTGCTGCCGTGAA
GGACCCGAAGAGTTTACTACGCACGAAGGAGGATATCGAAGAGTACGAGC
GACACGAGCAGGACCTGGAGATTGTCAAGGACCTCTTCCAGAAGGAGCCC
GAACCTGAAAAATCGGAGACCACCACCCCGGCAGAGGGAGAGGCCCCTGC
TGTGGTTGCGAATGACCAGGACAAGGACAAGGACAGTACAATGGAGGACA
AGGACAAGGAACAGGAGGAAGAGGATGTCAACAAGGACAAGTTGGCGGGG
CAGCTGTTCCTGATGCAATTCCCACCGATGACGCCGAACCTGGTGGTACC
GGGCAACAACGAGAATCCAGCGGATGAAGCTACAGATGCGATGGCGGGGC
AGAGCGCACCGGAGGCCAGTGGGTCGGAGCAGACAGGCGTCAAGCGCGAA
GATGGCGTGGAGATCCTCGAAGGTGGAGAGGATGCCACGGCAACAGGGAC
GTCATCCAAGATTGTCACTGCAACCGACTGGGGCCTCAGCGCCGGGCGCG
TCGGCAAGCTGAACGTCCATGCGTCGGGTCGGGTGACGATGGACTGGGGA
GGCATCAGCTTCGAGCTGGATCGCGCAACAGCCGTGGACTTTCTCCAGGA
AGCGTTGATCGTGTCGACCCCGCCTAATGCAGCGGACGAGGAATTCCCGG
ATGATGAAAAGAAGGTGTGGGCGATGGGACAGCTGAGTGGGAAGTTTACG
GTGACACCGGACTGGGGGAAGATGCTGTAACAGGATGCTGTAACATGATG
TTGTAGTAACAGTGAGAAGGCTGGTCGAATGTTGACAGTATCCCACTATA
GATGGGGCTGTTGTGATGGCCTTGTTTATTTGGGAGGCAGGAAGGGATTT
ACGTCATGCGGGATGGCTGGGGGACGGCCGATCGGATGTTATGTTCATAC
TAAAGACGAAGATAAAGATAGAACTGTCAAAAGTTCAGATGCCAATGAGG
AATAACCTTGGGATGATGTATTATCCACATGGATGGCTGTGAGAGGTGAC
GACGTAAGAAAGGAATGCCA
back to top

Coding sequence (CDS) from alignment at KZ851908.1:401995..404314-

>M747DRAFT_294382-T1 ID=M747DRAFT_294382-T1|Name=M747DRAFT_294382-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1845bp|location=Sequence derived from alignment at KZ851908.1:401995..404314- (Aspergillus niger ATCC 13496)
ATGCCTCCGAAAGGTGCTCCCCGACGAGGAGCACCGGCCGGCGCAGCCAG
CCGCGCCAATGCATCTACAACCGCCTCCGCGAGTCCCGCGCCCAGCGCCA
CCACCACGGGCGACTCCCAGACTCCAACACCCGGCCCATCAGCCTCCGGG
CGAGCCCCCGTCCAGCGCCTTCAATCGCTCAAGAAACGCACACCCTCCGG
CAGCATCGGACCGGCCGCGAAACCCCCCGGCGCGCCCGCTGCGCCCGGCG
AACCTGCCAAGCCCACACTCAAATACAAGCCGCGCGCCGTCGGCCGTCGC
AGCAAGGAGGAGCGAGAAGCCATCGAGAAGCTCGAAGCCGAGCGGCACCG
CGAGCGCCTGAAGGAGGCGGCGGCGATTCAGCGCGGCCGGGATCAAGGCG
GTCCTGGTGGTCGCGGTGGGTTTGGGCGCGGGCGTGGCGGACCTTTGGGG
TCTGCGGGCGGGCCATTGGGCTCGGGGATGTCTGGGCGTCGGGGTAGAGG
AGGACGGTTTGGACAGGATTCGAGACATTCGTCTATGTCGAGACGCAGTC
GGTCGGTCATTGATCTGGGAAATACGGCGGCGGGTGCGGGGACGCGCGAT
TACTCGTCGGATGAGAGTGATGGCGAGGTGCGCATCAGTATTGACCAGAT
CAATTTGGATAGTGATGAGGAGGATCAGGAGCAGATGATGGTCGATAGCA
AGAAGGGGAAGGCGGCGGTTAAGTATGCCGATGCTGAGAAGGGGTTACGG
CCTATTCGCGTCGAGAGACATGAGCATGAGGAGCGCGTGGTCAGTGTCAA
TATGGAGTCGAGCTCGAGCAAGTCGGCGGAGCTGAGGGAGAAGGCTAAGG
CGCAGGCGAAGGAGGATGATGGTGCGCTCTTTGTGCAGCAGAATGATGAT
GATGCTGCGGCTACTACGGAAGGAGAGCCCAAGGTCAAGTCTGAGCCTAC
GGATGATGATGATCAGGTCATGACAGATGTTCCGCATGCCGAGGAGCCAG
CTACGACGGATGATGGATTGCTGCCGGTACAGAAGGTCAAGGTGCGCAGG
AAAATCACACCCCCGTCGAACGAGGCGACACCCCAGCCCGAAATGGAGAT
CCCTGCTGCCGTGAAGGACCCGAAGAGTTTACTACGCACGAAGGAGGATA
TCGAAGAGTACGAGCGACACGAGCAGGACCTGGAGATTGTCAAGGACCTC
TTCCAGAAGGAGCCCGAACCTGAAAAATCGGAGACCACCACCCCGGCAGA
GGGAGAGGCCCCTGCTGTGGTTGCGAATGACCAGGACAAGGACAAGGACA
GTACAATGGAGGACAAGGACAAGGAACAGGAGGAAGAGGATGTCAACAAG
GACAAGTTGGCGGGGCAGCTGTTCCTGATGCAATTCCCACCGATGACGCC
GAACCTGGTGGTACCGGGCAACAACGAGAATCCAGCGGATGAAGCTACAG
ATGCGATGGCGGGGCAGAGCGCACCGGAGGCCAGTGGGTCGGAGCAGACA
GGCGTCAAGCGCGAAGATGGCGTGGAGATCCTCGAAGGTGGAGAGGATGC
CACGGCAACAGGGACGTCATCCAAGATTGTCACTGCAACCGACTGGGGCC
TCAGCGCCGGGCGCGTCGGCAAGCTGAACGTCCATGCGTCGGGTCGGGTG
ACGATGGACTGGGGAGGCATCAGCTTCGAGCTGGATCGCGCAACAGCCGT
GGACTTTCTCCAGGAAGCGTTGATCGTGTCGACCCCGCCTAATGCAGCGG
ACGAGGAATTCCCGGATGATGAAAAGAAGGTGTGGGCGATGGGACAGCTG
AGTGGGAAGTTTACGGTGACACCGGACTGGGGGAAGATGCTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005666RNA polymerase III complex
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006383transcription by RNA polymerase III
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_294382M747DRAFT_294382Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294382-T1.cdsM747DRAFT_294382-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294382-T1.utr3p1M747DRAFT_294382-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294382-T1.exon1M747DRAFT_294382-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294382-T1.utr5p1M747DRAFT_294382-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294382-T1M747DRAFT_294382-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007811
DBxrefPFAM:PF05132
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851908.1supercontigKZ851908.1:401995..404314 -
Powered by Drupal