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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851908.1:558903..559700+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_294437-T1 ID=M747DRAFT_294437-T1|Name=M747DRAFT_294437-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=798bp|location=Sequence derived from alignment at KZ851908.1:558903..559700+ (Aspergillus niger ATCC 13496)
CTTGTCGCCTCACTACCAACTTCACAATGAGCGCCCAGGCATACTACGAG
CTCTATCGCGGGAGCAGGTACGATAGGGTCTGCGACGACATGTCAGGAAA
TACCACTAACCCTCCGCAACAGCCTCGGACTCTCCCTGACCGATACCCTC
GATGACCTGATCAACGAAGGACGGATCGAGCCCCAGCTCGCCATGAAGAT
CCTCTCAACTTTCGATCGCGTGATCACAGAGGTGCTGGCAGACAAAGTGC
GCGCTCGTCTGACTTTCAAGGTACGCTTGCATATGAGGATAAGGAAGGCT
GCGCTTGGAGCAGATGAAGGAGGCGAACTGAGGCTGACATGGCTTTTCTT
ACCACCACAGGGACATCTTGATACCTACCGATTCTGCGACGAAGTGTGGA
CATTCCTTATCAAGGACGTTACTTTCAAGCTGGATAACCAGACTACGGTC
TCCGCGGATAAAGTGAAGATTGTGAGCTGCAATAGCAAGAGGCCTGGTGA
AGCCTAAGGGTGAGGGATCGTTTACCTTGCGTCATCGGTTGATACTCTCG
TTACCTCACTTCCTCACACTCTTTTTTTCTCCTTCCGCCACTTGCTTTGA
TAGGCGTTGTTGAACCTATATTTCTTCTGTTTTACTCTTCATGTGGATTG
CTCTTTTGTGCCCGGGACATGGCAAGTTGCTTGATATGGGGCTTTATCAT
ATTTTTGGCGTTTCGCGTTAGCATATGAGGCTGAATTATGGATTTGCTAT
GGTGCTACTAGAATAGATTGAAATCAGATACCCGAATCTACACCATCG back to topCoding sequence (CDS) from alignment at KZ851908.1:558903..559700+ >M747DRAFT_294437-T1 ID=M747DRAFT_294437-T1|Name=M747DRAFT_294437-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1008bp|location=Sequence derived from alignment at KZ851908.1:558903..559700+ (Aspergillus niger ATCC 13496)
ATGAGCGCCCAGGCATACTACGAGCTCTATCGCGGGAGCAGCCTCGGACT
CTCCCTGACCGATACCCTCGATGACCTGATCAACGAAGGACGGATCGAGC
CCCAGCTCGCCATGAAGATCCTCTCAACTTTCGATCGCGTGATCACAGAG
GTGCTGGCAGACAAAGTGCGCGCTCGTCTGACTTTCAAGGGACATCTTGA
TACCTACCGATTCTGCGACGAAGTGTGGACATTCCTTATCAAGGACGTTA
CTTTCAAGCTGGATAACCAGACTACGGTCTCCGCGGATAAAGTGAAGATT
GTGAGCTGCAATAGCAAGAGGCCTGGTGAAGCCTAAATGAGCGCCCAGGC
ATACTACGAGCTCTATCGCGGGAGCAGCCTCGGACTCTCCCTGACCGATA
CCCTCGATGACCTGATCAACGAAGGACGGATCGAGCCCCAGCTCGCCATG
AAGATCCTCTCAACTTTCGATCGCGTGATCACAGAGGTGCTGGCAGACAA
AGTGCGCGCTCGTCTGACTTTCAAGGGACATCTTGATACCTACCGATTCT
GCGACGAAGTGTGGACATTCCTTATCAAGGACGTTACTTTCAAGCTGGAT
AACCAGACTACGGTCTCCGCGGATAAAGTGAAGATTGTGAGCTGCAATAG
CAAGAGGCCTGGTGAAGCCTAAATGAGCGCCCAGGCATACTACGAGCTCT
ATCGCGGGAGCAGCCTCGGACTCTCCCTGACCGATACCCTCGATGACCTG
ATCAACGAAGGACGGATCGAGCCCCAGCTCGCCATGAAGATCCTCTCAAC
TTTCGATCGCGTGATCACAGAGGTGCTGGCAGACAAAGTGCGCGCTCGTC
TGACTTTCAAGGGACATCTTGATACCTACCGATTCTGCGACGAAGTGTGG
ACATTCCTTATCAAGGACGTTACTTTCAAGCTGGATAACCAGACTACGGT
CTCCGCGGATAAAGTGAAGATTGTGAGCTGCAATAGCAAGAGGCCTGGTG
AAGCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005672 | transcription factor TFIIA complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006367 | transcription initiation from RNA polymerase II promoter |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265ER6 |
| DBxref | InterPro:IPR003194 |
| DBxref | InterPro:IPR015871 |
| DBxref | InterPro:IPR009088 |
| DBxref | InterPro:IPR015872 |
| DBxref | InterPro:IPR009083 |
| DBxref | PFAM:PF02268 |
| DBxref | PFAM:PF02751 |
| Product | Transcription initiation factor IIA small chain (TFIIA 13.5 kDa subunit) |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851908.1 | supercontig | KZ851908.1:558903..559700 + |
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