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M747DRAFT_294769-T1, M747DRAFT_294769-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_294769-T1
Unique NameM747DRAFT_294769-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851910.1:93364..95016-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_294769-T1 ID=M747DRAFT_294769-T1|Name=M747DRAFT_294769-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1653bp|location=Sequence derived from alignment at KZ851910.1:93364..95016- (Aspergillus niger ATCC 13496)
GCTTCAACATCGCGTACGTCACTGACGATTTCTCTGGAAGTCATCTAGTC
CTTTGATTTGTCGCTCATTTACGCCTCAGTTACGATCGCTCTGTTAGCCT
CGGAAAGCTGGGCTACTCGTCAACCCTTTCTTCGCGCCAATATTAGGCTG
TGTGGCGCCATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACC
ATACATCAAACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATA
CAGTACTCGCTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGAT
CTAGACTTCTCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCG
GTCACTATGGGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACG
ACGAGGAGATTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGAT
CTCAAACGGGTAGGTCTCTAAATGCGATGAACTTTGTCGAGGGACCTCGG
TTTGTGTTACACACGGACTGACACTTGCGACCTTTTGCAGGTCAGTTTGC
GCATAAACGCACGAGAAGACAATCGCGATATTCCTAAAGACTATCTACTG
CAACGGCAAACGATAACCTCAGAGAATGTTTCGCACTTGACGCAAAATAC
GTACCTTTTCACGGAGAGGGACCTCCCGGGTCATGAGAATCGTATGGTGG
TTTTTGGCGAGGCGCGTTCGGCGCTCTATGAGTCGATGAAGCGGGATATG
AGGAAGAAGGAGCGCAAGAAGAAATGGGAGCCCTACGTCAGGAAAACGGT
ACCGAGTATGTACCATCTGTTACTGCGACAAAGGAGATCTTGCTCACATT
GTAATAGAACAAACCGCTTTGGTGGGGAGCGTGAGTGAAGAGTTCAACTG
CCTTCCGGTTGAGAATGAGGAATTCCGGCGGTTGTCGGAGAAGAAGGCTC
TGGAGGCACTCAAACCGAAGCGTGAGACTGTATTTATCGATAAGATTCCG
GGCAAGATGCTCCAGCCGCGGAATGCATTGCCCGGAGAGAAGGGTGCTTT
TGTGGTAAGTGTGCCTTTGCCGTGCTCATTAGTCCTACTTTACTTACCAA
ACACTTTTCATTCCAGCAAGCAACAAGGCCAGTCAAGCCCAAGGCCCAGG
AGAACAAAACCACTCGTATGCCTCAAAACGAGCTGTTGGATCTTATCTAC
CAGTGCTTCAGGGAATACAAGTACTGGCCATTTAAGAACCTCAAAGCGAG
ACTGCGACAGCCCGAGGCTTATCTCAAACAAACTCTGGAAATGGTTGCGC
ATTTGGTTAAAGCTGGTGACTTTGCTATGACCTGGGAGCTGAAGCCCGAG
GCGAGGGAAAGCAACTACGCCAATGCGATGTACAACGATGCTAAGGATGA
ACTCGCTCCGGGAGACTACAACTTCGAGGACGGCTCTGAAGAGGAAGCCA
CGCCTTCCGGTATGATGACAGATAATGACGAAGGACAGTTCGAGAACGTT
GTCTAAGGATATAAATCCTATGTAGCATAAGGGCCATGGCGTTTCTTTGG
GGTTTGGGCGATTTGATACAGGCTGTTTAGATAGTATATCATGAGCGCTT
AGATGACAGGCCCGACATCTAACACGCATTTTCCAGAGCCAATATCATCG
GCT
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Coding sequence (CDS) from alignment at KZ851910.1:93364..95016-

>M747DRAFT_294769-T1 ID=M747DRAFT_294769-T1|Name=M747DRAFT_294769-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4608bp|location=Sequence derived from alignment at KZ851910.1:93364..95016- (Aspergillus niger ATCC 13496)
CAAGCAACAAGGCCAGTCAAGCCCAAGGCCCAGGAGAACAAAACCACTCG
TATGCCTCAAAACGAGCTGTTGGATCTTATCTACCAGTGCTTCAGGGAAT
ACAAGTACTGGCCATTTAAGAACCTCAAAGCGAGACTGCGACAGCCCGAG
GCTTATCTCAAACAAACTCTGGAAATGGTTGCGCATTTGGTTAAAGCTGG
TGACTTTGCTATGACCTGGGAGCTGAAGCCCGAGGCGAGGGAAAGCAACT
ACGCCAATGCGATGTACAACGATGCTAAGGATGAACTCGCTCCGGGAGAC
TACAACTTCGAGGACGGCTCTGAAGAGGAAGCCACGCCTTCCGGTATGAT
GACAGATAATGACGAAGGACAGTTCGAGAACGTTGTCTAAAACAAACCGC
TTTGGTGGGGAGCGTGAGTGAAGAGTTCAACTGCCTTCCGGTTGAGAATG
AGGAATTCCGGCGGTTGTCGGAGAAGAAGGCTCTGGAGGCACTCAAACCG
AAGCGTGAGACTGTATTTATCGATAAGATTCCGGGCAAGATGCTCCAGCC
GCGGAATGCATTGCCCGGAGAGAAGGGTGCTTTTGTGGTCAGTTTGCGCA
TAAACGCACGAGAAGACAATCGCGATATTCCTAAAGACTATCTACTGCAA
CGGCAAACGATAACCTCAGAGAATGTTTCGCACTTGACGCAAAATACGTA
CCTTTTCACGGAGAGGGACCTCCCGGGTCATGAGAATCGTATGGTGGTTT
TTGGCGAGGCGCGTTCGGCGCTCTATGAGTCGATGAAGCGGGATATGAGG
AAGAAGGAGCGCAAGAAGAAATGGGAGCCCTACGTCAGGAAAACGGTACC
GAATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACCATACATC
AAACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATACAGTACT
CGCTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGATCTAGACT
TCTCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCGGTCACTA
TGGGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACGACGAGGA
GATTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGATCTCAAAC
GGCAAGCAACAAGGCCAGTCAAGCCCAAGGCCCAGGAGAACAAAACCACT
CGTATGCCTCAAAACGAGCTGTTGGATCTTATCTACCAGTGCTTCAGGGA
ATACAAGTACTGGCCATTTAAGAACCTCAAAGCGAGACTGCGACAGCCCG
AGGCTTATCTCAAACAAACTCTGGAAATGGTTGCGCATTTGGTTAAAGCT
GGTGACTTTGCTATGACCTGGGAGCTGAAGCCCGAGGCGAGGGAAAGCAA
CTACGCCAATGCGATGTACAACGATGCTAAGGATGAACTCGCTCCGGGAG
ACTACAACTTCGAGGACGGCTCTGAAGAGGAAGCCACGCCTTCCGGTATG
ATGACAGATAATGACGAAGGACAGTTCGAGAACGTTGTCTAAAACAAACC
GCTTTGGTGGGGAGCGTGAGTGAAGAGTTCAACTGCCTTCCGGTTGAGAA
TGAGGAATTCCGGCGGTTGTCGGAGAAGAAGGCTCTGGAGGCACTCAAAC
CGAAGCGTGAGACTGTATTTATCGATAAGATTCCGGGCAAGATGCTCCAG
CCGCGGAATGCATTGCCCGGAGAGAAGGGTGCTTTTGTGGTCAGTTTGCG
CATAAACGCACGAGAAGACAATCGCGATATTCCTAAAGACTATCTACTGC
AACGGCAAACGATAACCTCAGAGAATGTTTCGCACTTGACGCAAAATACG
TACCTTTTCACGGAGAGGGACCTCCCGGGTCATGAGAATCGTATGGTGGT
TTTTGGCGAGGCGCGTTCGGCGCTCTATGAGTCGATGAAGCGGGATATGA
GGAAGAAGGAGCGCAAGAAGAAATGGGAGCCCTACGTCAGGAAAACGGTA
CCGAATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACCATACA
TCAAACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATACAGTA
CTCGCTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGATCTAGA
CTTCTCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCGGTCAC
TATGGGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACGACGAG
GAGATTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGATCTCAA
ACGGCAAGCAACAAGGCCAGTCAAGCCCAAGGCCCAGGAGAACAAAACCA
CTCGTATGCCTCAAAACGAGCTGTTGGATCTTATCTACCAGTGCTTCAGG
GAATACAAGTACTGGCCATTTAAGAACCTCAAAGCGAGACTGCGACAGCC
CGAGGCTTATCTCAAACAAACTCTGGAAATGGTTGCGCATTTGGTTAAAG
CTGGTGACTTTGCTATGACCTGGGAGCTGAAGCCCGAGGCGAGGGAAAGC
AACTACGCCAATGCGATGTACAACGATGCTAAGGATGAACTCGCTCCGGG
AGACTACAACTTCGAGGACGGCTCTGAAGAGGAAGCCACGCCTTCCGGTA
TGATGACAGATAATGACGAAGGACAGTTCGAGAACGTTGTCTAAAACAAA
CCGCTTTGGTGGGGAGCGTGAGTGAAGAGTTCAACTGCCTTCCGGTTGAG
AATGAGGAATTCCGGCGGTTGTCGGAGAAGAAGGCTCTGGAGGCACTCAA
ACCGAAGCGTGAGACTGTATTTATCGATAAGATTCCGGGCAAGATGCTCC
AGCCGCGGAATGCATTGCCCGGAGAGAAGGGTGCTTTTGTGGTCAGTTTG
CGCATAAACGCACGAGAAGACAATCGCGATATTCCTAAAGACTATCTACT
GCAACGGCAAACGATAACCTCAGAGAATGTTTCGCACTTGACGCAAAATA
CGTACCTTTTCACGGAGAGGGACCTCCCGGGTCATGAGAATCGTATGGTG
GTTTTTGGCGAGGCGCGTTCGGCGCTCTATGAGTCGATGAAGCGGGATAT
GAGGAAGAAGGAGCGCAAGAAGAAATGGGAGCCCTACGTCAGGAAAACGG
TACCGAATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACCATA
CATCAAACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATACAG
TACTCGCTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGATCTA
GACTTCTCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCGGTC
ACTATGGGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACGACG
AGGAGATTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGATCTC
AAACGGCAAGCAACAAGGCCAGTCAAGCCCAAGGCCCAGGAGAACAAAAC
CACTCGTATGCCTCAAAACGAGCTGTTGGATCTTATCTACCAGTGCTTCA
GGGAATACAAGTACTGGCCATTTAAGAACCTCAAAGCGAGACTGCGACAG
CCCGAGGCTTATCTCAAACAAACTCTGGAAATGGTTGCGCATTTGGTTAA
AGCTGGTGACTTTGCTATGACCTGGGAGCTGAAGCCCGAGGCGAGGGAAA
GCAACTACGCCAATGCGATGTACAACGATGCTAAGGATGAACTCGCTCCG
GGAGACTACAACTTCGAGGACGGCTCTGAAGAGGAAGCCACGCCTTCCGG
TATGATGACAGATAATGACGAAGGACAGTTCGAGAACGTTGTCTAAAACA
AACCGCTTTGGTGGGGAGCGTGAGTGAAGAGTTCAACTGCCTTCCGGTTG
AGAATGAGGAATTCCGGCGGTTGTCGGAGAAGAAGGCTCTGGAGGCACTC
AAACCGAAGCGTGAGACTGTATTTATCGATAAGATTCCGGGCAAGATGCT
CCAGCCGCGGAATGCATTGCCCGGAGAGAAGGGTGCTTTTGTGGTCAGTT
TGCGCATAAACGCACGAGAAGACAATCGCGATATTCCTAAAGACTATCTA
CTGCAACGGCAAACGATAACCTCAGAGAATGTTTCGCACTTGACGCAAAA
TACGTACCTTTTCACGGAGAGGGACCTCCCGGGTCATGAGAATCGTATGG
TGGTTTTTGGCGAGGCGCGTTCGGCGCTCTATGAGTCGATGAAGCGGGAT
ATGAGGAAGAAGGAGCGCAAGAAGAAATGGGAGCCCTACGTCAGGAAAAC
GGTACCGAATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACCA
TACATCAAACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATAC
AGTACTCGCTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGATC
TAGACTTCTCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCGG
TCACTATGGGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACGA
CGAGGAGATTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGATC
TCAAACGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_294769M747DRAFT_294769Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294769-T1M747DRAFT_294769-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294769-T1.cdsM747DRAFT_294769-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294769-T1.utr3p1M747DRAFT_294769-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294769-T1.exon4M747DRAFT_294769-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_294769-T1.exon3M747DRAFT_294769-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_294769-T1.exon2M747DRAFT_294769-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_294769-T1.exon1M747DRAFT_294769-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294769-T1.utr5p1M747DRAFT_294769-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262NIR
DBxrefInterPro:IPR011039
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR040450
DBxrefInterPro:IPR040504
DBxrefPFAM:PF17683
DBxrefPFAM:PF02270
Product beta subunit
Producttranscription initiation factor iif
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851910.1supercontigKZ851910.1:93364..95016 -
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