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M747DRAFT_295027-T1, M747DRAFT_295027-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295027-T1
Unique NameM747DRAFT_295027-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851911.1:260601..262955-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295027-T1 ID=M747DRAFT_295027-T1|Name=M747DRAFT_295027-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2355bp|location=Sequence derived from alignment at KZ851911.1:260601..262955- (Aspergillus niger ATCC 13496)
TAAAGTCACTAGTCATAGTGTCGATAAGCCTCGCAGCGCCTTCAGATTAA
GCCACGGCAGCTCTTATCCGCTCAGCTCGCCACGCCAATCCCAGTGCGCA
CTACAGGGATCTCCTCAAGCCCACCGTTGCCCCTCTTGGGTTCACCGTTC
GGGGATCCGCTGTGACTTCGCCACGGGTGGTGGTGGTCTCGAAGCCGAAA
GTGCACGTCTCCCTCCGAGCGAGGAGTTTCGCTGCTCTTTCGCTCCTGCA
ACCCGGAGCCAGAAGGTTTCATCCCCCCTTTGATCTCCTGGAACTTTGCC
CGGCCATGTAAAGACGCCCCTCCCCTTAGTCGGATGCCGCGCAAGAAGGC
TGCAGACCGCGTGGGTCCGGTCAAGACCCGAAGCCGCAGTGGCTGTAAAG
AATGCCGCGCCAGTCGAGTCCGCTGCGATCTGAAGAAACCGATCTGCACC
AGGTGCCTTGAGAAGGGTCTAGTATGCTCGACCCAACTCGTTCTCAAGTG
GGAGTCCGAGTTCGTTAGCCGCGGCTTGGCTTTTGGTAGAGCCGGCGTTT
GGAGTAAGGCTCGGGCTGCCGGCGGACTTCCTCCTCCTCCTGGAAAGTCT
TCGGCTTCGTTCCTCCTTCGCGATCAGGAATGGTGTCCTATTCCCCTTAT
CGAGTCGTGGGGCTTCGTCAATAGTGGGGTTTCGACTTTTGAACAGCCTT
ATGAGGTTAATGTTGCCTGTGATGAGTTGAATGCTCTTGTCGTCCGGGAC
AAGGGCAAGAACCCGGCGCTGGATGACTTGCTAGATGAGAATCCAGAGTG
GTCTTTATCACCCTCATCGTTGTCGTCTCCATTCTCGATACGTGAGACTT
CCGACTACTGCTCGCCTGTCCCACTTGTCTCTCCGCACCTGACCCCGCCT
TTATCGATGTTCCCCAGTCTCTCAGACTCCAATCAGGGTCTCCTCTTTGA
TTACTATCTCCAGCAAGTTTGTCCCCGGACCACCGCTAGCTCGAAGCTAT
CCTCCCCTTTTGCTTCCATCATCCTCCCCTTCTGCATGTCCGCATCTCCA
ATCCTATTCAAAGCCATTCAGGCTCTTGGAGCATGTCACTGGTCACGCTT
CGACTCAACCTACAGTGTCATCGGCCTCCGCCTCAAATCAGAAGCCCTAC
GAGGCCTTCGCCACCGTCTTTCAACCGAAGGCTCCCTCCTCTGCTCCGCA
GACCCCGAGGTCCTAGCGATCATGATGATGTTATGTCTCTACGAAATCGT
CGACAACTGCGACCAACGCTGGACCATCCACTTAAAAGGCGCCAAAGAAT
TGATCCGCATCCGCCGGCAGCAACAACAACTAACTTCCTCCCGACCCCGT
CAATCTCTCGACCCCGTCTCAGCCTTCGCCGAGCTCTTCTTCGCCTTTCA
AGACGTCATGGGCCGCACCGCCTGCGGCGAAGAAGTCCTCTTCGGATCCG
ACTACTGGCAAGAAAACAACCGCCACATCGACCTCTGGATGGGCTGCAGC
CCCGAACTTGTCTCCATCCTCTCCTCAATTACAGAAATGAGCCGCACCAG
GCGCCAACTCACCTCCGATGCTGCCCGCAAAGCGTTCTCCCACCGTGCCG
CCTCCCTTGGCCGCAGACTCGAGAACCTTGTTCAAGAAACAACCGACGAC
GACAACGACACCGACGACGGAAGTCTTCGCTCCGCCGCCGAACTGAAACG
TTTAGCAGCCGTGCTATACCTTCACTGCGCACTATATGGCGCATCTCCCT
CCACACCACTGGTAATTAACTATGTCCGACGCATCCTGCGTCTAGTCTCT
GACCTGCTCGACTCCGGCTCCCTCGTCAGTATGACCTGGCCTGTGTTCGT
AGCGGCCGTTGAATTGGACCCGCTTCACGACGAAGTCTGGCGTGATGATA
CCGGCGAGAGCGTGGTATATGGTCGGCCTCTGGTGTTGCGTGCGTTGGCG
GCTATGGCGGAATCAAGTGTGTCGAATGTGGCGAGGACGAGAGCCGTCAT
TGTCAAGATTTGGCAGGCCCGGGATAGTGATATGCTCAAGGGGTCGCCGG
TGGATGCAGCGGATGATAGTATTGCGGGATGTAATGATTGGGAGTGGTAT
GTTGCGCCGATAAGCACGGCGATGAGTTTGGCTTGAGGTGCGCTGGTGGC
AAAACGAGAAAGTGTTGGATGTGCGGGATATCGCTAACATATGCTATGCA
AGTGCGGTGGGCAGGAAAATGAGGACACAGCGCTTTGTTTTGAGCGCTTA
AATGACTATATGATTTGAATGTTCTTGTAGGATTAGGTATACTGGTTTTG
GGACTTTGTTTGGCTTCAATGTATAGTGACTTGGACTCAGATTGATAAAT
TGGAC
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Coding sequence (CDS) from alignment at KZ851911.1:260601..262955-

>M747DRAFT_295027-T1 ID=M747DRAFT_295027-T1|Name=M747DRAFT_295027-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1803bp|location=Sequence derived from alignment at KZ851911.1:260601..262955- (Aspergillus niger ATCC 13496)
ATGCCGCGCAAGAAGGCTGCAGACCGCGTGGGTCCGGTCAAGACCCGAAG
CCGCAGTGGCTGTAAAGAATGCCGCGCCAGTCGAGTCCGCTGCGATCTGA
AGAAACCGATCTGCACCAGGTGCCTTGAGAAGGGTCTAGTATGCTCGACC
CAACTCGTTCTCAAGTGGGAGTCCGAGTTCGTTAGCCGCGGCTTGGCTTT
TGGTAGAGCCGGCGTTTGGAGTAAGGCTCGGGCTGCCGGCGGACTTCCTC
CTCCTCCTGGAAAGTCTTCGGCTTCGTTCCTCCTTCGCGATCAGGAATGG
TGTCCTATTCCCCTTATCGAGTCGTGGGGCTTCGTCAATAGTGGGGTTTC
GACTTTTGAACAGCCTTATGAGGTTAATGTTGCCTGTGATGAGTTGAATG
CTCTTGTCGTCCGGGACAAGGGCAAGAACCCGGCGCTGGATGACTTGCTA
GATGAGAATCCAGAGTGGTCTTTATCACCCTCATCGTTGTCGTCTCCATT
CTCGATACGTGAGACTTCCGACTACTGCTCGCCTGTCCCACTTGTCTCTC
CGCACCTGACCCCGCCTTTATCGATGTTCCCCAGTCTCTCAGACTCCAAT
CAGGGTCTCCTCTTTGATTACTATCTCCAGCAAGTTTGTCCCCGGACCAC
CGCTAGCTCGAAGCTATCCTCCCCTTTTGCTTCCATCATCCTCCCCTTCT
GCATGTCCGCATCTCCAATCCTATTCAAAGCCATTCAGGCTCTTGGAGCA
TGTCACTGGTCACGCTTCGACTCAACCTACAGTGTCATCGGCCTCCGCCT
CAAATCAGAAGCCCTACGAGGCCTTCGCCACCGTCTTTCAACCGAAGGCT
CCCTCCTCTGCTCCGCAGACCCCGAGGTCCTAGCGATCATGATGATGTTA
TGTCTCTACGAAATCGTCGACAACTGCGACCAACGCTGGACCATCCACTT
AAAAGGCGCCAAAGAATTGATCCGCATCCGCCGGCAGCAACAACAACTAA
CTTCCTCCCGACCCCGTCAATCTCTCGACCCCGTCTCAGCCTTCGCCGAG
CTCTTCTTCGCCTTTCAAGACGTCATGGGCCGCACCGCCTGCGGCGAAGA
AGTCCTCTTCGGATCCGACTACTGGCAAGAAAACAACCGCCACATCGACC
TCTGGATGGGCTGCAGCCCCGAACTTGTCTCCATCCTCTCCTCAATTACA
GAAATGAGCCGCACCAGGCGCCAACTCACCTCCGATGCTGCCCGCAAAGC
GTTCTCCCACCGTGCCGCCTCCCTTGGCCGCAGACTCGAGAACCTTGTTC
AAGAAACAACCGACGACGACAACGACACCGACGACGGAAGTCTTCGCTCC
GCCGCCGAACTGAAACGTTTAGCAGCCGTGCTATACCTTCACTGCGCACT
ATATGGCGCATCTCCCTCCACACCACTGGTAATTAACTATGTCCGACGCA
TCCTGCGTCTAGTCTCTGACCTGCTCGACTCCGGCTCCCTCGTCAGTATG
ACCTGGCCTGTGTTCGTAGCGGCCGTTGAATTGGACCCGCTTCACGACGA
AGTCTGGCGTGATGATACCGGCGAGAGCGTGGTATATGGTCGGCCTCTGG
TGTTGCGTGCGTTGGCGGCTATGGCGGAATCAAGTGTGTCGAATGTGGCG
AGGACGAGAGCCGTCATTGTCAAGATTTGGCAGGCCCGGGATAGTGATAT
GCTCAAGGGGTCGCCGGTGGATGCAGCGGATGATAGTATTGCGGGATGTA
ATGATTGGGAGTGGTATGTTGCGCCGATAAGCACGGCGATGAGTTTGGCT
TGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_295027M747DRAFT_295027Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295027-T1.cdsM747DRAFT_295027-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295027-T1.utr3p1M747DRAFT_295027-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295027-T1.exon1M747DRAFT_295027-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295027-T1.utr5p1M747DRAFT_295027-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295027-T1M747DRAFT_295027-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
ProductC6 transcription factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851911.1supercontigKZ851911.1:260601..262955 -
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