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M747DRAFT_295225-T1, M747DRAFT_295225-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295225-T1
Unique NameM747DRAFT_295225-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851912.1:228618..230336-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295225-T1 ID=M747DRAFT_295225-T1|Name=M747DRAFT_295225-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1719bp|location=Sequence derived from alignment at KZ851912.1:228618..230336- (Aspergillus niger ATCC 13496)
TATCACCCATATTTTCTTTCACTGCCATTATGAACGGCGTTCAGGATTCA
ACCTCTGCTGCGGCCTCGTCCCAGTCTGCGCAGAGGCAGGTGCGCGTGCA
GCTCGTTAGCAAGCAAGAAGACATTGCGCTGCCTGAGAGCACCGGCCCCA
TTCTGGTTCCCACAGGTACGAATGCATTTTGGCAACTTACTGCTAGTCTG
CTTTGTATACACTTGTGTGCTCACTGATTTTTGTAATATTCTGTAGGATT
GCGGAGATATGCACTTTCTACCCTGGTGAATAATCTCTTGGGAAACGACA
AGCCGGTGCCATTTGAGTTTTTGATTAATGGCGCATTCCTTCGGACTTCG
ATCGATGAATACTTGACGGCCAATGGCATATCTGCGGAAACCACTCTGGA
AATTGAGTACATAAGAGCGTTGATTCCCCCGCTCCATATTGCCTCCTTCG
AGCATGATGACTGGGTTGGCTCTGTGGATGTCCTCTCTGCGACCTCGCTT
GCTACCTCTTGGGCTTCTGCGGTCGTCTCTCCAGGCCAGGAGAGAATCCT
ATCGGGAAGCTATGACGGATTGCTTCGTGTGTGGAATATGTCCTCCCAGA
TCGTCGCAACCTCACCGTCCCCGGCTGATGGAGGGCACGGTGCGTCCATC
AAAGCCGCTAAGTTCATCTCGCCGAATTCGATTGTGTCGGCTGGCCTTGA
TCGCACCGTTCGACTCTGGAAGTACAATGAAAGCGATGATGGATTCTCAG
GAAAGATCACTCCGCAGATTGAGCTCTACGGACACAAATCTGGTATCAAC
TCGTTGGCTGTGCATGCCCCCTCGAACCGTATTCTCTCCGCCTCGTCAGA
CCACAGCATTGGCTTCTGGTCGACAAAGAAGTCAGATGCCCCAGCTGCCC
CCGAGAACCTAGTTCCATCTGCTGCGTCACGGAGCTCCAAGCGCAGAAAG
GTGAGCTCGTCCGTCAGCATCCCGCAGCGTGGCCCGCTTGCGCTGTTGTC
TTCCCACACTGCGCCAGTGTCAGCTGCCATTTTTGACACAAACGACTCGA
CTGTCGGTTATTCTACTTCGTGGGATCACTCTCTGCGTACATGGGATCTG
GTCACGGCCGCTTTAGTAGACACCAGATCGACATCCCATTCGTTGCTATC
TCTCGAGCATCTCCCCGAGCACCACCTTCTTGCGACAGGAACTTCCGCTC
GCCACATCACTCTCATCGATCCTCGTACATCAGCGACAACCATCTCCGCC
ATGACCCTCAGAGGTCACACCAATGCCGTGGTTTCGCTGTCCCGCGATCC
CCACAGCAGCTACGGTCTCATCAGTGGTAGTCACGACGGTACATGTCGAA
TCTGGGATATCCGTGCTACGAAGACGGACAATGACGGTGTTGTTGGTGAG
AGCGTGTATTCGATTACTCGGAGAAGCTTGGAAGAGCAAGGTAAAGCGGA
TGCTAAGCGAGTAGGTGGAGAGGGAGTCAAGGTCTTCAGTGTGTGCTGGG
ACCGCTCGGTTGGCATTGTCAGCGCCGGTGAGGATAAGAGGATTCAGATC
AACCGGGGTGAAGGCGTCTTGTCTTCCGCATAAGAGGAGTTGCACACATG
GTTCTGGCGTTATAACTATAGGATGAAAAGTTTGGTTCTGAGTATTTGTA
TTAAAACAAGCCACTGTACGAGCTGATGTTTCCACTTGCAATATATCCTA
TAATTGCTTTAGAGAGAGG
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Coding sequence (CDS) from alignment at KZ851912.1:228618..230336-

>M747DRAFT_295225-T1 ID=M747DRAFT_295225-T1|Name=M747DRAFT_295225-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2946bp|location=Sequence derived from alignment at KZ851912.1:228618..230336- (Aspergillus niger ATCC 13496)
GATTGCGGAGATATGCACTTTCTACCCTGGTGAATAATCTCTTGGGAAAC
GACAAGCCGGTGCCATTTGAGTTTTTGATTAATGGCGCATTCCTTCGGAC
TTCGATCGATGAATACTTGACGGCCAATGGCATATCTGCGGAAACCACTC
TGGAAATTGAGTACATAAGAGCGTTGATTCCCCCGCTCCATATTGCCTCC
TTCGAGCATGATGACTGGGTTGGCTCTGTGGATGTCCTCTCTGCGACCTC
GCTTGCTACCTCTTGGGCTTCTGCGGTCGTCTCTCCAGGCCAGGAGAGAA
TCCTATCGGGAAGCTATGACGGATTGCTTCGTGTGTGGAATATGTCCTCC
CAGATCGTCGCAACCTCACCGTCCCCGGCTGATGGAGGGCACGGTGCGTC
CATCAAAGCCGCTAAGTTCATCTCGCCGAATTCGATTGTGTCGGCTGGCC
TTGATCGCACCGTTCGACTCTGGAAGTACAATGAAAGCGATGATGGATTC
TCAGGAAAGATCACTCCGCAGATTGAGCTCTACGGACACAAATCTGGTAT
CAACTCGTTGGCTGTGCATGCCCCCTCGAACCGTATTCTCTCCGCCTCGT
CAGACCACAGCATTGGCTTCTGGTCGACAAAGAAGTCAGATGCCCCAGCT
GCCCCCGAGAACCTAGTTCCATCTGCTGCGTCACGGAGCTCCAAGCGCAG
AAAGGTGAGCTCGTCCGTCAGCATCCCGCAGCGTGGCCCGCTTGCGCTGT
TGTCTTCCCACACTGCGCCAGTGTCAGCTGCCATTTTTGACACAAACGAC
TCGACTGTCGGTTATTCTACTTCGTGGGATCACTCTCTGCGTACATGGGA
TCTGGTCACGGCCGCTTTAGTAGACACCAGATCGACATCCCATTCGTTGC
TATCTCTCGAGCATCTCCCCGAGCACCACCTTCTTGCGACAGGAACTTCC
GCTCGCCACATCACTCTCATCGATCCTCGTACATCAGCGACAACCATCTC
CGCCATGACCCTCAGAGGTCACACCAATGCCGTGGTTTCGCTGTCCCGCG
ATCCCCACAGCAGCTACGGTCTCATCAGTGGTAGTCACGACGGTACATGT
CGAATCTGGGATATCCGTGCTACGAAGACGGACAATGACGGTGTTGTTGG
TGAGAGCGTGTATTCGATTACTCGGAGAAGCTTGGAAGAGCAAGGTAAAG
CGGATGCTAAGCGAGTAGGTGGAGAGGGAGTCAAGGTCTTCAGTGTGTGC
TGGGACCGCTCGGTTGGCATTGTCAGCGCCGGTGAGGATAAGAGGATTCA
GATCAACCGGGGTGAAGGCGTCTTGTCTTCCGCATAAATGAACGGCGTTC
AGGATTCAACCTCTGCTGCGGCCTCGTCCCAGTCTGCGCAGAGGCAGGTG
CGCGTGCAGCTCGTTAGCAAGCAAGAAGACATTGCGCTGCCTGAGAGCAC
CGGCCCCATTCTGGTTCCCACAGGATTGCGGAGATATGCACTTTCTACCC
TGGTGAATAATCTCTTGGGAAACGACAAGCCGGTGCCATTTGAGTTTTTG
ATTAATGGCGCATTCCTTCGGACTTCGATCGATGAATACTTGACGGCCAA
TGGCATATCTGCGGAAACCACTCTGGAAATTGAGTACATAAGAGCGTTGA
TTCCCCCGCTCCATATTGCCTCCTTCGAGCATGATGACTGGGTTGGCTCT
GTGGATGTCCTCTCTGCGACCTCGCTTGCTACCTCTTGGGCTTCTGCGGT
CGTCTCTCCAGGCCAGGAGAGAATCCTATCGGGAAGCTATGACGGATTGC
TTCGTGTGTGGAATATGTCCTCCCAGATCGTCGCAACCTCACCGTCCCCG
GCTGATGGAGGGCACGGTGCGTCCATCAAAGCCGCTAAGTTCATCTCGCC
GAATTCGATTGTGTCGGCTGGCCTTGATCGCACCGTTCGACTCTGGAAGT
ACAATGAAAGCGATGATGGATTCTCAGGAAAGATCACTCCGCAGATTGAG
CTCTACGGACACAAATCTGGTATCAACTCGTTGGCTGTGCATGCCCCCTC
GAACCGTATTCTCTCCGCCTCGTCAGACCACAGCATTGGCTTCTGGTCGA
CAAAGAAGTCAGATGCCCCAGCTGCCCCCGAGAACCTAGTTCCATCTGCT
GCGTCACGGAGCTCCAAGCGCAGAAAGGTGAGCTCGTCCGTCAGCATCCC
GCAGCGTGGCCCGCTTGCGCTGTTGTCTTCCCACACTGCGCCAGTGTCAG
CTGCCATTTTTGACACAAACGACTCGACTGTCGGTTATTCTACTTCGTGG
GATCACTCTCTGCGTACATGGGATCTGGTCACGGCCGCTTTAGTAGACAC
CAGATCGACATCCCATTCGTTGCTATCTCTCGAGCATCTCCCCGAGCACC
ACCTTCTTGCGACAGGAACTTCCGCTCGCCACATCACTCTCATCGATCCT
CGTACATCAGCGACAACCATCTCCGCCATGACCCTCAGAGGTCACACCAA
TGCCGTGGTTTCGCTGTCCCGCGATCCCCACAGCAGCTACGGTCTCATCA
GTGGTAGTCACGACGGTACATGTCGAATCTGGGATATCCGTGCTACGAAG
ACGGACAATGACGGTGTTGTTGGTGAGAGCGTGTATTCGATTACTCGGAG
AAGCTTGGAAGAGCAAGGTAAAGCGGATGCTAAGCGAGTAGGTGGAGAGG
GAGTCAAGGTCTTCAGTGTGTGCTGGGACCGCTCGGTTGGCATTGTCAGC
GCCGGTGAGGATAAGAGGATTCAGATCAACCGGGGTGAAGGCGTCTTGTC
TTCCGCATAAATGAACGGCGTTCAGGATTCAACCTCTGCTGCGGCCTCGT
CCCAGTCTGCGCAGAGGCAGGTGCGCGTGCAGCTCGTTAGCAAGCAAGAA
GACATTGCGCTGCCTGAGAGCACCGGCCCCATTCTGGTTCCCACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YTM1M747DRAFT_295225Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295225-T1M747DRAFT_295225-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295225-T1.cdsM747DRAFT_295225-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295225-T1.utr3p1M747DRAFT_295225-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295225-T1.exon2M747DRAFT_295225-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_295225-T1.exon1M747DRAFT_295225-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295225-T1.utr5p1M747DRAFT_295225-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR028599
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR012972
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF08154
Productribosome bioproteinsis protein ytm1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851912.1supercontigKZ851912.1:228618..230336 -
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