You are here

Home

M747DRAFT_295300-T1, M747DRAFT_295300-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295300-T1
Unique NameM747DRAFT_295300-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851912.1:464097..465276-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295300-T1 ID=M747DRAFT_295300-T1|Name=M747DRAFT_295300-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1180bp|location=Sequence derived from alignment at KZ851912.1:464097..465276- (Aspergillus niger ATCC 13496)
TCACCATGTCCGCTCCCTCCCTCGCCAGCTACATCGTCAAGCGCCCCTTC
CTCAAGCGCTGGATGATGCCCATTGCCCAGTGGTACACCGATGCCTCTGG
CTACAGGAGACTCGGCTTGAAGTAGGCGATCCCCTTGCCCTCATGGGTGG
TTTCCCGGACCAACATCAGCGACTACGAATCAATGGAAGAGACAATGGAT
AGATTTCAATTGCGGGAGATATATAATCAGCACCCTCCACTTGACTATCC
ATATCATGTTCCTGCCGTCGCCCGCTGGTCCGGGCATTACGAACCAACCC
ATAATCAACCTCCATTGCAGCATCAACTAACAATCAAACCAGGGCTGATG
ACCTGATCCCCGAGGAGAACGACGTCGTCCAGAAGGCCCTCAAGCGTCTC
CCTCCCAAGGAGGCCTACGACCGTATCTTCCGCATCCGCAGAGCATTCCA
GGTCCGTCCTCACACACCGAAATCCAACCACAGAAGAACATAAAACTAAC
ATAATATGCGCGAAACAGTGCTCCATCTCCCACACCCTCCTTCCCGCTGC
TGAGCAGACCAAGCCCGAGGAGGTGAGTCGATTTCCGCGTTCTTCAATCC
GTCAATTGTCCGTTCAGTTTCTCCGCAAAAACGCATCGGCCAATCCCGTG
AGCGGGATTTGTAACCCACCTGGGTTACTCCATACCGATGCTTATGGTGA
CTGGACTTGATATATTGATGTCCCTGATATATTATTTGACGCGTTTAAGA
CCATATTCGTGTCGTGGATGCTAACTGTCATCGTCCCCAGGATGTCGAGT
ACCTGAGCCCCATCATCCGCGAGATCGAGAAGGAGAAGCAGGAGCGTGAA
GACCTCGACGCCCTTGTCGTCAGACGGTAGATTATGTCTCTGGCTTCGCT
GAACTAGATTACTTTTGTTACGGTATACAAAAATGCCGCTGGGGTTTTAT
AGACGGGCGGGAATACTAAGTATCAGAGAGAACTTGCTGTCCCGGCTCGG
CTCGGCGGGCATGCTGCGAAGAAGAGAGGGAGGAGAGAGAGAGCATTTGG
CTGGTTGTTAATTGAAGCTTTTGATTTATGGTGCTCAATCACGTGTACTG
ATACTGTACAAATTCACTCGTCATCGTTCTCTAGTTGGCTTGTAGCTTTC
AGCTTATGCGTGGTTCATGATACATGCCCG
back to top

Coding sequence (CDS) from alignment at KZ851912.1:464097..465276-

>M747DRAFT_295300-T1 ID=M747DRAFT_295300-T1|Name=M747DRAFT_295300-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1476bp|location=Sequence derived from alignment at KZ851912.1:464097..465276- (Aspergillus niger ATCC 13496)
GATGTCGAGTACCTGAGCCCCATCATCCGCGAGATCGAGAAGGAGAAGCA
GGAGCGTGAAGACCTCGACGCCCTTGTCGTCAGACGGTAGTGCTCCATCT
CCCACACCCTCCTTCCCGCTGCTGAGCAGACCAAGCCCGAGGAGGGCTGA
TGACCTGATCCCCGAGGAGAACGACGTCGTCCAGAAGGCCCTCAAGCGTC
TCCCTCCCAAGGAGGCCTACGACCGTATCTTCCGCATCCGCAGAGCATTC
CAGATGTCCGCTCCCTCCCTCGCCAGCTACATCGTCAAGCGCCCCTTCCT
CAAGCGCTGGATGATGCCCATTGCCCAGTGGTACACCGATGCCTCTGGCT
ACAGGAGACTCGGCTTGAAGATGTCGAGTACCTGAGCCCCATCATCCGCG
AGATCGAGAAGGAGAAGCAGGAGCGTGAAGACCTCGACGCCCTTGTCGTC
AGACGGTAGTGCTCCATCTCCCACACCCTCCTTCCCGCTGCTGAGCAGAC
CAAGCCCGAGGAGGGCTGATGACCTGATCCCCGAGGAGAACGACGTCGTC
CAGAAGGCCCTCAAGCGTCTCCCTCCCAAGGAGGCCTACGACCGTATCTT
CCGCATCCGCAGAGCATTCCAGATGTCCGCTCCCTCCCTCGCCAGCTACA
TCGTCAAGCGCCCCTTCCTCAAGCGCTGGATGATGCCCATTGCCCAGTGG
TACACCGATGCCTCTGGCTACAGGAGACTCGGCTTGAAGATGTCGAGTAC
CTGAGCCCCATCATCCGCGAGATCGAGAAGGAGAAGCAGGAGCGTGAAGA
CCTCGACGCCCTTGTCGTCAGACGGTAGTGCTCCATCTCCCACACCCTCC
TTCCCGCTGCTGAGCAGACCAAGCCCGAGGAGGGCTGATGACCTGATCCC
CGAGGAGAACGACGTCGTCCAGAAGGCCCTCAAGCGTCTCCCTCCCAAGG
AGGCCTACGACCGTATCTTCCGCATCCGCAGAGCATTCCAGATGTCCGCT
CCCTCCCTCGCCAGCTACATCGTCAAGCGCCCCTTCCTCAAGCGCTGGAT
GATGCCCATTGCCCAGTGGTACACCGATGCCTCTGGCTACAGGAGACTCG
GCTTGAAGATGTCGAGTACCTGAGCCCCATCATCCGCGAGATCGAGAAGG
AGAAGCAGGAGCGTGAAGACCTCGACGCCCTTGTCGTCAGACGGTAGTGC
TCCATCTCCCACACCCTCCTTCCCGCTGCTGAGCAGACCAAGCCCGAGGA
GGGCTGATGACCTGATCCCCGAGGAGAACGACGTCGTCCAGAAGGCCCTC
AAGCGTCTCCCTCCCAAGGAGGCCTACGACCGTATCTTCCGCATCCGCAG
AGCATTCCAGATGTCCGCTCCCTCCCTCGCCAGCTACATCGTCAAGCGCC
CCTTCCTCAAGCGCTGGATGATGCCCATTGCCCAGTGGTACACCGATGCC
TCTGGCTACAGGAGACTCGGCTTGAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005750mitochondrial respiratory chain complex III
Vocabulary: Biological Process
TermDefinition
GO:0006122mitochondrial electron transport, ubiquinol to cytochrome c
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_295300M747DRAFT_295300Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295300-T1M747DRAFT_295300-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295300-T1.cdsM747DRAFT_295300-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295300-T1.utr3p1M747DRAFT_295300-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295300-T1.exon4M747DRAFT_295300-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_295300-T1.exon3M747DRAFT_295300-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_295300-T1.exon2M747DRAFT_295300-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_295300-T1.exon1M747DRAFT_295300-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295300-T1.utr5p1M747DRAFT_295300-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8519121.1
NoteBUSCO:EOG09265G9U
DBxrefInterPro:IPR036544
DBxrefInterPro:IPR003197
DBxrefPFAM:PF02271
Product14 kDa subunit of cytochrome bd ubiquinol oxidase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851912.1supercontigKZ851912.1:464097..465276 -
Powered by Drupal