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M747DRAFT_295472-T1, M747DRAFT_295472-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295472-T1
Unique NameM747DRAFT_295472-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851913.1:407028..408240+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295472-T1 ID=M747DRAFT_295472-T1|Name=M747DRAFT_295472-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1213bp|location=Sequence derived from alignment at KZ851913.1:407028..408240+ (Aspergillus niger ATCC 13496)
TGTTCTTATCGGCGGTCTGGGGTTCTGATCCAATTACTTGAAGTTATCAG
AGCTCCCCTTTGGGCCCTCTTCTGCTCTTCTCCAACTATTTACAAATCCG
GGGCACTGGGATTGTTGTCTTCATCCCCTATTATTTGCATTAATTAGTCT
CACTAAATATATAGTCGTATTTATTCTTTGATCATGCTCCGGTGGTATGT
CCCTATCCATCCTGATGATCAATATTTCCATCGCTGATCAGGCACAGGTA
TCAAGCGAGGTTGGCCAAGCAGCCTATCCTCACTGCTAGTGTGACGAGTG
CTGTAAGAACTCCATTCTTCTTTCTTACAAATCAAGATTCATTTCCTCTC
GTACTCTCTATTATCTAATGTCAACCCCGACGTAATACCAATTTGAGCTG
ACCTTTATTTCCCATGCGGACTAGCTGTTGTTTGGTAGTGGAGATGTTCT
AGCCCAACAACTAGTCGATCGTAAGGGATTTGATAAGCACGACCTGGCAA
GAACGGGACGCATGGCCCTTTATGGTGGAGGTGAGCTACCATATAATCCC
TTGTCAATCTGGGATCTTCTTTCTGCCCTTGGAAGTCCTGGGAAAGCCTT
CCTCCATACAATGGGAAGTGGTCAAGCTAACATATAACAGCGATCTTCGG
GCCGGCTGCTACCACCTGGTACGGTGTTCTCCAGCGTCACGTCGTCCTGA
ATAACGCCAAAACTACCCTCATTGCCCGTGTCATCGCGGATCAATGTGTC
TTCACTCCCGCACACCTTACTTGTTTCTTGTCCTCCATGGCTATCATGGA
AGGCACCGATCCGATCGAGAAGTGGCGCAATGGTTTCGTTCCCAGCTTCA
AAGCAAACCTTGCGATTTGGCCTCTCGTTCAAGGAGTCAACTTTGCCATC
GTGCCACTTGAGTACCGCGTGCTTTTTGTCAACCTAGTCGCTTTGGGTGT
GTATTCCGGCCTTCTACTAATATCGAATGATGCTGACGCCATTAGGCTGG
AACTGTTTGTTGAGCTTGATTAACAGCGGTGAGAAGTGATTTTGATTTTC
AATACCCTGTCTGTTGTAGACACTCTTTGCAGATATCCCTACACTGTCCA
TAGGTACTAGATGTTTTCTGGTCCAGTTGTTTTTCATTTGAATTCTGATA
TCTACGGCATTTTGCATGTTATATAGATTAATTTGAGGGTACTAAGTACT
ACTATGTTGTTTG
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Coding sequence (CDS) from alignment at KZ851913.1:407028..408240+

>M747DRAFT_295472-T1 ID=M747DRAFT_295472-T1|Name=M747DRAFT_295472-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2610bp|location=Sequence derived from alignment at KZ851913.1:407028..408240+ (Aspergillus niger ATCC 13496)
ATGCTCCGGTGGTATCAAGCGAGGTTGGCCAAGCAGCCTATCCTCACTGC
TAGTGTGACGAGTGCTCTGTTGTTTGGTAGTGGAGATGTTCTAGCCCAAC
AACTAGTCGATCGTAAGGGATTTGATAAGCACGACCTGGCAAGAACGGGA
CGCATGGCCCTTTATGGTGGAGCGATCTTCGGGCCGGCTGCTACCACCTG
GTACGGTGTTCTCCAGCGTCACGTCGTCCTGAATAACGCCAAAACTACCC
TCATTGCCCGTGTCATCGCGGATCAATGTGTCTTCACTCCCGCACACCTT
ACTTGTTTCTTGTCCTCCATGGCTATCATGGAAGGCACCGATCCGATCGA
GAAGTGGCGCAATGGTTTCGTTCCCAGCTTCAAAGCAAACCTTGCGATTT
GGCCTCTCGTTCAAGGAGTCAACTTTGCCATCGTGCCACTTGAGTACCGC
GTGCTTTTTGTCAACCTAGTCGCTTTGGGCTGGAACTGTTTGTTGAGCTT
GATTAACAGCGGTGAGAAGTGAATGCTCCGGTGGTATCAAGCGAGGTTGG
CCAAGCAGCCTATCCTCACTGCTAGTGTGACGAGTGCTCTGTTGTTTGGT
AGTGGAGATGTTCTAGCCCAACAACTAGTCGATCGTAAGGGATTTGATAA
GCACGACCTGGCAAGAACGGGACGCATGGCCCTTTATGGTGGAGCGATCT
TCGGGCCGGCTGCTACCACCTGGTACGGTGTTCTCCAGCGTCACGTCGTC
CTGAATAACGCCAAAACTACCCTCATTGCCCGTGTCATCGCGGATCAATG
TGTCTTCACTCCCGCACACCTTACTTGTTTCTTGTCCTCCATGGCTATCA
TGGAAGGCACCGATCCGATCGAGAAGTGGCGCAATGGTTTCGTTCCCAGC
TTCAAAGCAAACCTTGCGATTTGGCCTCTCGTTCAAGGAGTCAACTTTGC
CATCGTGCCACTTGAGTACCGCGTGCTTTTTGTCAACCTAGTCGCTTTGG
GCTGGAACTGTTTGTTGAGCTTGATTAACAGCGGTGAGAAGTGAATGCTC
CGGTGGTATCAAGCGAGGTTGGCCAAGCAGCCTATCCTCACTGCTAGTGT
GACGAGTGCTCTGTTGTTTGGTAGTGGAGATGTTCTAGCCCAACAACTAG
TCGATCGTAAGGGATTTGATAAGCACGACCTGGCAAGAACGGGACGCATG
GCCCTTTATGGTGGAGCGATCTTCGGGCCGGCTGCTACCACCTGGTACGG
TGTTCTCCAGCGTCACGTCGTCCTGAATAACGCCAAAACTACCCTCATTG
CCCGTGTCATCGCGGATCAATGTGTCTTCACTCCCGCACACCTTACTTGT
TTCTTGTCCTCCATGGCTATCATGGAAGGCACCGATCCGATCGAGAAGTG
GCGCAATGGTTTCGTTCCCAGCTTCAAAGCAAACCTTGCGATTTGGCCTC
TCGTTCAAGGAGTCAACTTTGCCATCGTGCCACTTGAGTACCGCGTGCTT
TTTGTCAACCTAGTCGCTTTGGGCTGGAACTGTTTGTTGAGCTTGATTAA
CAGCGGTGAGAAGTGAATGCTCCGGTGGTATCAAGCGAGGTTGGCCAAGC
AGCCTATCCTCACTGCTAGTGTGACGAGTGCTCTGTTGTTTGGTAGTGGA
GATGTTCTAGCCCAACAACTAGTCGATCGTAAGGGATTTGATAAGCACGA
CCTGGCAAGAACGGGACGCATGGCCCTTTATGGTGGAGCGATCTTCGGGC
CGGCTGCTACCACCTGGTACGGTGTTCTCCAGCGTCACGTCGTCCTGAAT
AACGCCAAAACTACCCTCATTGCCCGTGTCATCGCGGATCAATGTGTCTT
CACTCCCGCACACCTTACTTGTTTCTTGTCCTCCATGGCTATCATGGAAG
GCACCGATCCGATCGAGAAGTGGCGCAATGGTTTCGTTCCCAGCTTCAAA
GCAAACCTTGCGATTTGGCCTCTCGTTCAAGGAGTCAACTTTGCCATCGT
GCCACTTGAGTACCGCGTGCTTTTTGTCAACCTAGTCGCTTTGGGCTGGA
ACTGTTTGTTGAGCTTGATTAACAGCGGTGAGAAGTGAATGCTCCGGTGG
TATCAAGCGAGGTTGGCCAAGCAGCCTATCCTCACTGCTAGTGTGACGAG
TGCTCTGTTGTTTGGTAGTGGAGATGTTCTAGCCCAACAACTAGTCGATC
GTAAGGGATTTGATAAGCACGACCTGGCAAGAACGGGACGCATGGCCCTT
TATGGTGGAGCGATCTTCGGGCCGGCTGCTACCACCTGGTACGGTGTTCT
CCAGCGTCACGTCGTCCTGAATAACGCCAAAACTACCCTCATTGCCCGTG
TCATCGCGGATCAATGTGTCTTCACTCCCGCACACCTTACTTGTTTCTTG
TCCTCCATGGCTATCATGGAAGGCACCGATCCGATCGAGAAGTGGCGCAA
TGGTTTCGTTCCCAGCTTCAAAGCAAACCTTGCGATTTGGCCTCTCGTTC
AAGGAGTCAACTTTGCCATCGTGCCACTTGAGTACCGCGTGCTTTTTGTC
AACCTAGTCGCTTTGGGCTGGAACTGTTTGTTGAGCTTGATTAACAGCGG
TGAGAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SYM1_2M747DRAFT_295472Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295472-T1M747DRAFT_295472-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295472-T1.utr5p1M747DRAFT_295472-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295472-T1.exon1M747DRAFT_295472-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_295472-T1.exon2M747DRAFT_295472-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_295472-T1.exon3M747DRAFT_295472-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_295472-T1.exon4M747DRAFT_295472-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_295472-T1.exon5M747DRAFT_295472-T1.exon5Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295472-T1.cdsM747DRAFT_295472-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295472-T1.utr3p1M747DRAFT_295472-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007248
DBxrefPFAM:PF04117
ProductProtein required for ethanol metabolism
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851913.1supercontigKZ851913.1:407028..408240 +
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