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M747DRAFT_295514-T1, M747DRAFT_295514-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295514-T1
Unique NameM747DRAFT_295514-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851913.1:520478..522421+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295514-T1 ID=M747DRAFT_295514-T1|Name=M747DRAFT_295514-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1944bp|location=Sequence derived from alignment at KZ851913.1:520478..522421+ (Aspergillus niger ATCC 13496)
CCGAGCTCTCGTCAGCGTCGTCTCAAAGCCGGCGGGGTTCCTGCTCCTGA
CTCGATTTCTCCGTGAATAAGGAATTGCTCTGGAGGGCCTGAGCCAAAGC
TTGACCTCTGATTCACGAGAAGAGAATGATCGGCATCGGCCCAGGAACGG
GAAACCACCGGGACGAAACAATGACTCCAGAATTAATATCGAAGAAAGCT
GCCGTCTCTCATCGTCGTGTTAATCCTTGCAGCCACCTCATATGAGCTGG
GGTTATAGGGGCGGCCATGGATTCTCCGGTGGGAGGAGCTGCCCACGAGG
TATTTGGCATACTCGATGTCTATATAAGGCCGGCGACAATAGTTGCGTTC
CGTTGAGACCAAGCAGAGAGACACTTGCAAAGTAGCTTCTCACCATGCCT
GCTCTTCCCATCCTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAACGGCCA
GCTCTCCGGTAGCGTCGGTCCGCTCACTTCGGCACACTCCAAGGCTGCGA
CCAAGACGTGTAACGTGCTGGACTATGGTGCTGTGGCGGACAACTCCACC
GACATTGGGTCCGCCCTCTCAGAAGCCTGGGATGCGTGCTCGGATGGAGG
TCTGATCTATATTCCTCCTGGTGATTATGCGATGGATACCTGGGTGTCTC
TGTCGGGAGGCAAGGCGACCGCCATCATATTAGACGGCACTATCTACCGC
ACTGGCACCGACGGAGGTAATATGATTCTAGTGGAGAATTCTTCCGACTT
TGAGTTGTACAGCAACTCGTCCTCTGGTGCCGTCCAGGGATTTGGATATG
TGTACCACCGGGAGGGTGATCTTGATGGGCCACGGATTTTGCGACTCCAG
GACGTGAGCAATTTCGCGGTTCATGATATTATCCTGGTGGACGCGCCGGC
TTTCCACTTCGTCATGGACGACTGCTCCGATGGGGAGGTGTACAACATGG
CCATTCGCGGTGGTAACTCCGGCGGCTTGGATGGGATTGATGTGTGGGGT
AGCAACATCTGGGTCCACGATGTATGTCCCACGTTATGTCACAATAAAAA
GCGCTCGGTGCTGACCCATGTATCCAGGTCGAGGTGACCAACAAGGATGA
ATGTGTCACGGTCAAGGTAAGGGCCATCTGGTATGATCACCCCTAGCTCG
TGTACTGACAATCCGCAGAGCCCTGCCAACAACATCCTTGTGGAAAGTAT
CTACTGCAACTGGAGTGGAGGTTGTGCGATGGGATCTCTCGGCGCGGACA
CCGATATCACTGATATTCTGTACCGCAACGTTTACACCTGGAGTTCCAAC
CAGATGTACATGATCAAGAGCAACGGCGGCAGTGGGACAGTCAATAACAC
CGTTCTGGAGAACTTCATTGGTATGTTTGACCCACTCGAACGAGGTATAT
ACAGCCTCTGACTAATGTGGTTGCAGGACACGGCAACGCTTATTCTCTGG
ACGTTGACAGCTACTGGAGCAGCATGACAGCCGTGGATGGCGACGGTGTG
CAACTGAGCAACATCACGTTCAAGAACTGGAAGGGAACGGAGGCGGATGG
CGCCGAACGCGGGCCCATCAAGGTGGTATGCTCAGACACGGCCCCTTGCA
CCGACATCACCATCGAGGATTTTGCCATGTGGACCGAAAGCGGCGATGAG
CAGACCTACACCTGCGAGTCGGCGTATGGCGATGGATTCTGCCTCGAAGA
CAGCGATTCCACCACCTCGTACACGACCACCCAGACTGTCACCACGGCGC
CCTCGGGATATTCGGCAACCACGATGGCAGCGGATCTCACCACGGACTTT
GGCACGACCGCGTCCATCCCCATCCCTACCATCCCGACTTCCTTCTATCC
CGGCTTGACGGCGATCAGTCCGTTGGCATCGGCTGCCACCACGGCATGAA
ATCGAGTATGATTCAGTCCGTGCCCATGTTTGACAAAGTATCCA
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Coding sequence (CDS) from alignment at KZ851913.1:520478..522421+

>M747DRAFT_295514-T1 ID=M747DRAFT_295514-T1|Name=M747DRAFT_295514-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5364bp|location=Sequence derived from alignment at KZ851913.1:520478..522421+ (Aspergillus niger ATCC 13496)
ATGCCTGCTCTTCCCATCCTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAA
CGGCCAGCTCTCCGGTAGCGTCGGTCCGCTCACTTCGGCACACTCCAAGG
CTGCGACCAAGACGTGTAACGTGCTGGACTATGGTGCTGTGGCGGACAAC
TCCACCGACATTGGGTCCGCCCTCTCAGAAGCCTGGGATGCGTGCTCGGA
TGGAGGTCTGATCTATATTCCTCCTGGTGATTATGCGATGGATACCTGGG
TGTCTCTGTCGGGAGGCAAGGCGACCGCCATCATATTAGACGGCACTATC
TACCGCACTGGCACCGACGGAGGTAATATGATTCTAGTGGAGAATTCTTC
CGACTTTGAGTTGTACAGCAACTCGTCCTCTGGTGCCGTCCAGGGATTTG
GATATGTGTACCACCGGGAGGGTGATCTTGATGGGCCACGGATTTTGCGA
CTCCAGGACGTGAGCAATTTCGCGGTTCATGATATTATCCTGGTGGACGC
GCCGGCTTTCCACTTCGTCATGGACGACTGCTCCGATGGGGAGGTGTACA
ACATGGCCATTCGCGGTGGTAACTCCGGCGGCTTGGATGGGATTGATGTG
TGGGGTAGCAACATCTGGGTCCACGATGTCGAGGTGACCAACAAGGATGA
ATGTGTCACGGTCAAGAGCCCTGCCAACAACATCCTTGTGGAAAGTATCT
ACTGCAACTGGAGTGGAGGTTGTGCGATGGGATCTCTCGGCGCGGACACC
GATATCACTGATATTCTGTACCGCAACGTTTACACCTGGAGTTCCAACCA
GATGTACATGATCAAGAGCAACGGCGGCAGTGGGACAGTCAATAACACCG
TTCTGGAGAACTTCATTGGACACGGCAACGCTTATTCTCTGGACGTTGAC
AGCTACTGGAGCAGCATGACAGCCGTGGATGGCGACGGTGTGCAACTGAG
CAACATCACGTTCAAGAACTGGAAGGGAACGGAGGCGGATGGCGCCGAAC
GCGGGCCCATCAAGGTGGTATGCTCAGACACGGCCCCTTGCACCGACATC
ACCATCGAGGATTTTGCCATGTGGACCGAAAGCGGCGATGAGCAGACCTA
CACCTGCGAGTCGGCGTATGGCGATGGATTCTGCCTCGAAGACAGCGATT
CCACCACCTCGTACACGACCACCCAGACTGTCACCACGGCGCCCTCGGGA
TATTCGGCAACCACGATGGCAGCGGATCTCACCACGGACTTTGGCACGAC
CGCGTCCATCCCCATCCCTACCATCCCGACTTCCTTCTATCCCGGCTTGA
CGGCGATCAGTCCGTTGGCATCGGCTGCCACCACGGCATGAATGCCTGCT
CTTCCCATCCTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAACGGCCAGCT
CTCCGGTAGCGTCGGTCCGCTCACTTCGGCACACTCCAAGGCTGCGACCA
AGACGTGTAACGTGCTGGACTATGGTGCTGTGGCGGACAACTCCACCGAC
ATTGGGTCCGCCCTCTCAGAAGCCTGGGATGCGTGCTCGGATGGAGGTCT
GATCTATATTCCTCCTGGTGATTATGCGATGGATACCTGGGTGTCTCTGT
CGGGAGGCAAGGCGACCGCCATCATATTAGACGGCACTATCTACCGCACT
GGCACCGACGGAGGTAATATGATTCTAGTGGAGAATTCTTCCGACTTTGA
GTTGTACAGCAACTCGTCCTCTGGTGCCGTCCAGGGATTTGGATATGTGT
ACCACCGGGAGGGTGATCTTGATGGGCCACGGATTTTGCGACTCCAGGAC
GTGAGCAATTTCGCGGTTCATGATATTATCCTGGTGGACGCGCCGGCTTT
CCACTTCGTCATGGACGACTGCTCCGATGGGGAGGTGTACAACATGGCCA
TTCGCGGTGGTAACTCCGGCGGCTTGGATGGGATTGATGTGTGGGGTAGC
AACATCTGGGTCCACGATGTCGAGGTGACCAACAAGGATGAATGTGTCAC
GGTCAAGAGCCCTGCCAACAACATCCTTGTGGAAAGTATCTACTGCAACT
GGAGTGGAGGTTGTGCGATGGGATCTCTCGGCGCGGACACCGATATCACT
GATATTCTGTACCGCAACGTTTACACCTGGAGTTCCAACCAGATGTACAT
GATCAAGAGCAACGGCGGCAGTGGGACAGTCAATAACACCGTTCTGGAGA
ACTTCATTGGACACGGCAACGCTTATTCTCTGGACGTTGACAGCTACTGG
AGCAGCATGACAGCCGTGGATGGCGACGGTGTGCAACTGAGCAACATCAC
GTTCAAGAACTGGAAGGGAACGGAGGCGGATGGCGCCGAACGCGGGCCCA
TCAAGGTGGTATGCTCAGACACGGCCCCTTGCACCGACATCACCATCGAG
GATTTTGCCATGTGGACCGAAAGCGGCGATGAGCAGACCTACACCTGCGA
GTCGGCGTATGGCGATGGATTCTGCCTCGAAGACAGCGATTCCACCACCT
CGTACACGACCACCCAGACTGTCACCACGGCGCCCTCGGGATATTCGGCA
ACCACGATGGCAGCGGATCTCACCACGGACTTTGGCACGACCGCGTCCAT
CCCCATCCCTACCATCCCGACTTCCTTCTATCCCGGCTTGACGGCGATCA
GTCCGTTGGCATCGGCTGCCACCACGGCATGAATGCCTGCTCTTCCCATC
CTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAACGGCCAGCTCTCCGGTAG
CGTCGGTCCGCTCACTTCGGCACACTCCAAGGCTGCGACCAAGACGTGTA
ACGTGCTGGACTATGGTGCTGTGGCGGACAACTCCACCGACATTGGGTCC
GCCCTCTCAGAAGCCTGGGATGCGTGCTCGGATGGAGGTCTGATCTATAT
TCCTCCTGGTGATTATGCGATGGATACCTGGGTGTCTCTGTCGGGAGGCA
AGGCGACCGCCATCATATTAGACGGCACTATCTACCGCACTGGCACCGAC
GGAGGTAATATGATTCTAGTGGAGAATTCTTCCGACTTTGAGTTGTACAG
CAACTCGTCCTCTGGTGCCGTCCAGGGATTTGGATATGTGTACCACCGGG
AGGGTGATCTTGATGGGCCACGGATTTTGCGACTCCAGGACGTGAGCAAT
TTCGCGGTTCATGATATTATCCTGGTGGACGCGCCGGCTTTCCACTTCGT
CATGGACGACTGCTCCGATGGGGAGGTGTACAACATGGCCATTCGCGGTG
GTAACTCCGGCGGCTTGGATGGGATTGATGTGTGGGGTAGCAACATCTGG
GTCCACGATGTCGAGGTGACCAACAAGGATGAATGTGTCACGGTCAAGAG
CCCTGCCAACAACATCCTTGTGGAAAGTATCTACTGCAACTGGAGTGGAG
GTTGTGCGATGGGATCTCTCGGCGCGGACACCGATATCACTGATATTCTG
TACCGCAACGTTTACACCTGGAGTTCCAACCAGATGTACATGATCAAGAG
CAACGGCGGCAGTGGGACAGTCAATAACACCGTTCTGGAGAACTTCATTG
GACACGGCAACGCTTATTCTCTGGACGTTGACAGCTACTGGAGCAGCATG
ACAGCCGTGGATGGCGACGGTGTGCAACTGAGCAACATCACGTTCAAGAA
CTGGAAGGGAACGGAGGCGGATGGCGCCGAACGCGGGCCCATCAAGGTGG
TATGCTCAGACACGGCCCCTTGCACCGACATCACCATCGAGGATTTTGCC
ATGTGGACCGAAAGCGGCGATGAGCAGACCTACACCTGCGAGTCGGCGTA
TGGCGATGGATTCTGCCTCGAAGACAGCGATTCCACCACCTCGTACACGA
CCACCCAGACTGTCACCACGGCGCCCTCGGGATATTCGGCAACCACGATG
GCAGCGGATCTCACCACGGACTTTGGCACGACCGCGTCCATCCCCATCCC
TACCATCCCGACTTCCTTCTATCCCGGCTTGACGGCGATCAGTCCGTTGG
CATCGGCTGCCACCACGGCATGAATGCCTGCTCTTCCCATCCTCGCCCTT
GCCCTCGCCCCGTTGCTGGTCAACGGCCAGCTCTCCGGTAGCGTCGGTCC
GCTCACTTCGGCACACTCCAAGGCTGCGACCAAGACGTGTAACGTGCTGG
ACTATGGTGCTGTGGCGGACAACTCCACCGACATTGGGTCCGCCCTCTCA
GAAGCCTGGGATGCGTGCTCGGATGGAGGTCTGATCTATATTCCTCCTGG
TGATTATGCGATGGATACCTGGGTGTCTCTGTCGGGAGGCAAGGCGACCG
CCATCATATTAGACGGCACTATCTACCGCACTGGCACCGACGGAGGTAAT
ATGATTCTAGTGGAGAATTCTTCCGACTTTGAGTTGTACAGCAACTCGTC
CTCTGGTGCCGTCCAGGGATTTGGATATGTGTACCACCGGGAGGGTGATC
TTGATGGGCCACGGATTTTGCGACTCCAGGACGTGAGCAATTTCGCGGTT
CATGATATTATCCTGGTGGACGCGCCGGCTTTCCACTTCGTCATGGACGA
CTGCTCCGATGGGGAGGTGTACAACATGGCCATTCGCGGTGGTAACTCCG
GCGGCTTGGATGGGATTGATGTGTGGGGTAGCAACATCTGGGTCCACGAT
GTCGAGGTGACCAACAAGGATGAATGTGTCACGGTCAAGAGCCCTGCCAA
CAACATCCTTGTGGAAAGTATCTACTGCAACTGGAGTGGAGGTTGTGCGA
TGGGATCTCTCGGCGCGGACACCGATATCACTGATATTCTGTACCGCAAC
GTTTACACCTGGAGTTCCAACCAGATGTACATGATCAAGAGCAACGGCGG
CAGTGGGACAGTCAATAACACCGTTCTGGAGAACTTCATTGGACACGGCA
ACGCTTATTCTCTGGACGTTGACAGCTACTGGAGCAGCATGACAGCCGTG
GATGGCGACGGTGTGCAACTGAGCAACATCACGTTCAAGAACTGGAAGGG
AACGGAGGCGGATGGCGCCGAACGCGGGCCCATCAAGGTGGTATGCTCAG
ACACGGCCCCTTGCACCGACATCACCATCGAGGATTTTGCCATGTGGACC
GAAAGCGGCGATGAGCAGACCTACACCTGCGAGTCGGCGTATGGCGATGG
ATTCTGCCTCGAAGACAGCGATTCCACCACCTCGTACACGACCACCCAGA
CTGTCACCACGGCGCCCTCGGGATATTCGGCAACCACGATGGCAGCGGAT
CTCACCACGGACTTTGGCACGACCGCGTCCATCCCCATCCCTACCATCCC
GACTTCCTTCTATCCCGGCTTGACGGCGATCAGTCCGTTGGCATCGGCTG
CCACCACGGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_295514M747DRAFT_295514Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295514-T1M747DRAFT_295514-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295514-T1.utr5p1M747DRAFT_295514-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295514-T1.exon1M747DRAFT_295514-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_295514-T1.exon2M747DRAFT_295514-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_295514-T1.exon3M747DRAFT_295514-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_295514-T1.exon4M747DRAFT_295514-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295514-T1.cdsM747DRAFT_295514-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295514-T1.utr3p1M747DRAFT_295514-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefPFAM:PF00295
Productrhamnogalacturonase rhgA
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851913.1supercontigKZ851913.1:520478..522421 +
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