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M747DRAFT_295561-T1, M747DRAFT_295561-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295561-T1
Unique NameM747DRAFT_295561-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851913.1:669616..671011+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295561-T1 ID=M747DRAFT_295561-T1|Name=M747DRAFT_295561-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1396bp|location=Sequence derived from alignment at KZ851913.1:669616..671011+ (Aspergillus niger ATCC 13496)
TACAATTTCCGCAACCCCTACCAGTCAATCACTCCTTTACTTCTTTCTTC
ACCTTGAAAACAAGTAACTCCGAGAGTGTCAGCCAATATGAAGAAAGACC
TCGAGATTGCAGGATTCTCAATCCTGCCCCTACACTTCCCCGCAACACCA
GCATTCCCCAAGCCAGCAACACACTACCTCTACCTCCGCGCCCACGAGCC
TCGCATCCCAGATGCGGACACCCCCCGCTCCATGTTCATCGTGAACATCC
CCGTCGACACGACCGAAACCCACCTGCGCCACCTTTTCGGCACCCAGCTC
TCCGCAGGCCGCGTAGAGCGCGTTGAATTCGAAGCCGTCCCCACCAAAAA
GAAGGGCATGCAAGCCACCCCTCAAGGCAACATCGCCAGCAGCAAGAAAC
GCAAGCGCGTCACCGCCGACGAACTCCAAGCACAGCTGGACGATGTCGAT
CTCCCCGCTACCTGGGACCGACAGCTCCAGAAGAGCGGATCGCACGCGAT
CGTCGTCTTCGCCGACAAGCCCAGCATGGAGGCGAGTTTGAAAGCGGCGC
GCAAGGCCGCGAAAAAGGGCACGGAGATTGTCTGGGGTGAGGGTGTGGAG
GGTGATCGGGTACCTGCTCTGGGCTTGCAGAGGTACATTACCCATGAGCA
GTTGAGGTATCCGGATCGAGCGGAGTTGTTGCGCACCGTCAATGATTACA
TGACGGTGTTTACGCAGGTTGCGGAGGTCAGGAAGAGGGAGGAGGCGCGC
AGGGCGCAGGAACCCGACGAGGATGGATTTATTACTGTTACGTCTGGGCC
GAAGTTGGCGGAGGCTGCTCATGAGGATGAGGCTAAGGAGTTGATCGAGA
AGCAGAAGGAGAAGTCGAAGGGATTGGAGGACTTTTATCGCTTCCAGTCG
CGTGAGAAGAGAAAGGAGAAGCAGAACCAGCTGCTTAAGAAGTTTGATGA
TGATAGGAGGAAGTTGGCGGATATGAAGAAGCGAAAGGGGAAGATTGCGG
TATGTTTTCCCTTTTCTCCCCTCATTGATTTTGATGTGTAGGTGCTAATG
GTGTCTCAGCCTGAGTGATCTTGTTCTTTCGACTGTTTGGCATTGTTGGG
TCGGTTTAGCATGGCGTTTGGGGGTTCGTCCAAAAAAGTGCTTTATTCGA
TAGAGAATTGGCTTGGAGGGATGCCGGATGATGTGAGTTTGGACACTTTC
TTTTCTTTTGTATGGTCTGCACTGCATATGATGAATCCGCTGGGGCCAGA
GTAGCAAGACTCTGCAGTCGCTTGATGTCATGCTATGTCTACAAAAACCA
GCTTATTCCAATCTTCTCACCTATCTGAAGCAATTCTTTTCGCCATTTGC
TTATCTAGATGAGTTCTGTATGCACTGCTGACTTGCTGGCTTAGGC
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Coding sequence (CDS) from alignment at KZ851913.1:669616..671011+

>M747DRAFT_295561-T1 ID=M747DRAFT_295561-T1|Name=M747DRAFT_295561-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1842bp|location=Sequence derived from alignment at KZ851913.1:669616..671011+ (Aspergillus niger ATCC 13496)
ATGAAGAAAGACCTCGAGATTGCAGGATTCTCAATCCTGCCCCTACACTT
CCCCGCAACACCAGCATTCCCCAAGCCAGCAACACACTACCTCTACCTCC
GCGCCCACGAGCCTCGCATCCCAGATGCGGACACCCCCCGCTCCATGTTC
ATCGTGAACATCCCCGTCGACACGACCGAAACCCACCTGCGCCACCTTTT
CGGCACCCAGCTCTCCGCAGGCCGCGTAGAGCGCGTTGAATTCGAAGCCG
TCCCCACCAAAAAGAAGGGCATGCAAGCCACCCCTCAAGGCAACATCGCC
AGCAGCAAGAAACGCAAGCGCGTCACCGCCGACGAACTCCAAGCACAGCT
GGACGATGTCGATCTCCCCGCTACCTGGGACCGACAGCTCCAGAAGAGCG
GATCGCACGCGATCGTCGTCTTCGCCGACAAGCCCAGCATGGAGGCGAGT
TTGAAAGCGGCGCGCAAGGCCGCGAAAAAGGGCACGGAGATTGTCTGGGG
TGAGGGTGTGGAGGGTGATCGGGTACCTGCTCTGGGCTTGCAGAGGTACA
TTACCCATGAGCAGTTGAGGTATCCGGATCGAGCGGAGTTGTTGCGCACC
GTCAATGATTACATGACGGTGTTTACGCAGGTTGCGGAGGTCAGGAAGAG
GGAGGAGGCGCGCAGGGCGCAGGAACCCGACGAGGATGGATTTATTACTG
TTACGTCTGGGCCGAAGTTGGCGGAGGCTGCTCATGAGGATGAGGCTAAG
GAGTTGATCGAGAAGCAGAAGGAGAAGTCGAAGGGATTGGAGGACTTTTA
TCGCTTCCAGTCGCGTGAGAAGAGAAAGGAGAAGCAGAACCAGCTGCTTA
AGAAGTTTGATGATGATAGGAGGAAGTTGGCGGATATGAAGAAGCGAAAG
GGGAAGATTGCGCCTGAGTGAATGAAGAAAGACCTCGAGATTGCAGGATT
CTCAATCCTGCCCCTACACTTCCCCGCAACACCAGCATTCCCCAAGCCAG
CAACACACTACCTCTACCTCCGCGCCCACGAGCCTCGCATCCCAGATGCG
GACACCCCCCGCTCCATGTTCATCGTGAACATCCCCGTCGACACGACCGA
AACCCACCTGCGCCACCTTTTCGGCACCCAGCTCTCCGCAGGCCGCGTAG
AGCGCGTTGAATTCGAAGCCGTCCCCACCAAAAAGAAGGGCATGCAAGCC
ACCCCTCAAGGCAACATCGCCAGCAGCAAGAAACGCAAGCGCGTCACCGC
CGACGAACTCCAAGCACAGCTGGACGATGTCGATCTCCCCGCTACCTGGG
ACCGACAGCTCCAGAAGAGCGGATCGCACGCGATCGTCGTCTTCGCCGAC
AAGCCCAGCATGGAGGCGAGTTTGAAAGCGGCGCGCAAGGCCGCGAAAAA
GGGCACGGAGATTGTCTGGGGTGAGGGTGTGGAGGGTGATCGGGTACCTG
CTCTGGGCTTGCAGAGGTACATTACCCATGAGCAGTTGAGGTATCCGGAT
CGAGCGGAGTTGTTGCGCACCGTCAATGATTACATGACGGTGTTTACGCA
GGTTGCGGAGGTCAGGAAGAGGGAGGAGGCGCGCAGGGCGCAGGAACCCG
ACGAGGATGGATTTATTACTGTTACGTCTGGGCCGAAGTTGGCGGAGGCT
GCTCATGAGGATGAGGCTAAGGAGTTGATCGAGAAGCAGAAGGAGAAGTC
GAAGGGATTGGAGGACTTTTATCGCTTCCAGTCGCGTGAGAAGAGAAAGG
AGAAGCAGAACCAGCTGCTTAAGAAGTTTGATGATGATAGGAGGAAGTTG
GCGGATATGAAGAAGCGAAAGGGGAAGATTGCGCCTGAGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_295561M747DRAFT_295561Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295561-T1.utr5p1M747DRAFT_295561-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295561-T1.exon1M747DRAFT_295561-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_295561-T1.exon2M747DRAFT_295561-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295561-T1.cdsM747DRAFT_295561-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295561-T1.utr3p1M747DRAFT_295561-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295561-T1M747DRAFT_295561-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092655SO
DBxrefInterPro:IPR040447
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR024326
DBxrefPFAM:PF12923
DBxrefPFAM:PF17799
Productribosomal small subunit assembly protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851913.1supercontigKZ851913.1:669616..671011 +
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