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M747DRAFT_295708-T1, M747DRAFT_295708-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295708-T1
Unique NameM747DRAFT_295708-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:444376..445825-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295708-T1 ID=M747DRAFT_295708-T1|Name=M747DRAFT_295708-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1450bp|location=Sequence derived from alignment at KZ851914.1:444376..445825- (Aspergillus niger ATCC 13496)
CATCAACTTCACCTCACATCATCCCCAATCCCTCCACCATCACAGTAGCC
ATGGCTGAAGCAACACCCCCAACTGAAACAGTAACCCCTCCTACGGAGGA
GGTCGTCGAAGACCAACAACAAACCCAGCAACAAGAAAACGAAACAACAG
AAGAAACCACCGCCCTAACAACCACCGCCGACGGCGCCGTCGAACCGCAA
AAGAAGACCAAAAAGATAATCCGACGCAAGCGCCGCCCAGCACGCCCACA
AGTCGACCCAGCGACAATCAAATCCGAGCCCCCACCCCAAGTCGGCACAA
TCTTCAACATCTGGTACAACAAATGGAGCGGCGGTGACCGCGAAAACTCC
TACCTAAGCAAGACGGCAGCACCCTCACGATGCAACATCGCGCGCGACAG
CGGCTACACACGGGCCGATAAAGTGCCCGGGTCATACTTCTGCCTGTTCT
TCGCGCGCGGGATATGCCCGCGCGGCGCAGAGTGCGAATACCTGCACCGT
TTACCAACACTGCACGACATATTCAACCCGAACGTGGATTGCTTTGGACG
GGACAAGTTCAGTGACTATCGGGATGATATGGGTGGTGTAGGATCATTCA
TGAGACAGAATCGCACGTTGTATGTGGGACGGATTCATGTGACGGACTCG
ATTGAGGAGGTGGTGGCGAGGAATTTCCAGGAATGGGGACAGATTGATCG
GATTCGGGTGCTTACGTCCCGGGGTGTTGCGTTCGTGACGTATACAAATG
AGGCGAATGCGCAGTTTGCGAAGGAGGCGATGGCGCATCAGAGTTTGGAT
CATAATGAGATTCTGAATGTGAGGTGGGCTACGGTCGATCCGAATCCGTT
GGCGCAGAAGAGGGAGGCGAGACGGCTGGAAGAGCAGGCTGCTGAGGCGG
TTAGGAGGGCGTTGCCGGCGGAGTTTGTGGCTGAGTTGGAAGGCAGGGAT
CCTGAGGCCAAGAAGAGGAAGAAGATTGAGGGGAGTTATGGGTTGCAGGG
GTATGAGCCGCCGGATGAGGTGTGGTTCTCGCGTGCGAAGGAGTTGGAGG
ATGCGAATGCGATTGCGCAATTGGAGGCTCCAGAGCAGCCGCTGATGATT
GAGGGTGCCTCTGAGACTGCTGCTGCTGCTCCGCAGGAGGAACAGGCCGG
AGGGATCTTCTCCAGCTCTGCTGTTGCGGCGTTGAAGGGCCTGGCTGGCG
GTGCTGTCACGACGCAGCAGGCGCCTAAAGCTGCTGGACCTCTGGTGGCG
TACGGGAGTGACGATGATAGCGAGTAATTTGGTTGATATTCATTGCATGC
ATTCTTACGTGTACTATAGCAGAGATACCTGAAAAATGTGCTTGGCTTGA
CTGGATTTCATTTCATCGTTTGGCTTCTATGGAACGGCTAATTTCAACGC
TTGTTTGCATGGCATAATTGTGGGTATATTCGAAAAGAGGAGATTCAATC
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Coding sequence (CDS) from alignment at KZ851914.1:444376..445825-

>M747DRAFT_295708-T1 ID=M747DRAFT_295708-T1|Name=M747DRAFT_295708-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1227bp|location=Sequence derived from alignment at KZ851914.1:444376..445825- (Aspergillus niger ATCC 13496)
ATGGCTGAAGCAACACCCCCAACTGAAACAGTAACCCCTCCTACGGAGGA
GGTCGTCGAAGACCAACAACAAACCCAGCAACAAGAAAACGAAACAACAG
AAGAAACCACCGCCCTAACAACCACCGCCGACGGCGCCGTCGAACCGCAA
AAGAAGACCAAAAAGATAATCCGACGCAAGCGCCGCCCAGCACGCCCACA
AGTCGACCCAGCGACAATCAAATCCGAGCCCCCACCCCAAGTCGGCACAA
TCTTCAACATCTGGTACAACAAATGGAGCGGCGGTGACCGCGAAAACTCC
TACCTAAGCAAGACGGCAGCACCCTCACGATGCAACATCGCGCGCGACAG
CGGCTACACACGGGCCGATAAAGTGCCCGGGTCATACTTCTGCCTGTTCT
TCGCGCGCGGGATATGCCCGCGCGGCGCAGAGTGCGAATACCTGCACCGT
TTACCAACACTGCACGACATATTCAACCCGAACGTGGATTGCTTTGGACG
GGACAAGTTCAGTGACTATCGGGATGATATGGGTGGTGTAGGATCATTCA
TGAGACAGAATCGCACGTTGTATGTGGGACGGATTCATGTGACGGACTCG
ATTGAGGAGGTGGTGGCGAGGAATTTCCAGGAATGGGGACAGATTGATCG
GATTCGGGTGCTTACGTCCCGGGGTGTTGCGTTCGTGACGTATACAAATG
AGGCGAATGCGCAGTTTGCGAAGGAGGCGATGGCGCATCAGAGTTTGGAT
CATAATGAGATTCTGAATGTGAGGTGGGCTACGGTCGATCCGAATCCGTT
GGCGCAGAAGAGGGAGGCGAGACGGCTGGAAGAGCAGGCTGCTGAGGCGG
TTAGGAGGGCGTTGCCGGCGGAGTTTGTGGCTGAGTTGGAAGGCAGGGAT
CCTGAGGCCAAGAAGAGGAAGAAGATTGAGGGGAGTTATGGGTTGCAGGG
GTATGAGCCGCCGGATGAGGTGTGGTTCTCGCGTGCGAAGGAGTTGGAGG
ATGCGAATGCGATTGCGCAATTGGAGGCTCCAGAGCAGCCGCTGATGATT
GAGGGTGCCTCTGAGACTGCTGCTGCTGCTCCGCAGGAGGAACAGGCCGG
AGGGATCTTCTCCAGCTCTGCTGTTGCGGCGTTGAAGGGCCTGGCTGGCG
GTGCTGTCACGACGCAGCAGGCGCCTAAAGCTGCTGGACCTCTGGTGGCG
TACGGGAGTGACGATGATAGCGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0046872metal ion binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CWC2M747DRAFT_295708Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295708-T1.cdsM747DRAFT_295708-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295708-T1.utr3p1M747DRAFT_295708-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295708-T1.exon1M747DRAFT_295708-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295708-T1.utr5p1M747DRAFT_295708-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295708-T1M747DRAFT_295708-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036855
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034181
DBxrefInterPro:IPR000571
DBxrefInterPro:IPR032297
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00642
DBxrefPFAM:PF16131
DBxrefPFAM:PF00076
ProductPre-mRNA-splicing factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:444376..445825 -
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