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M747DRAFT_295947-T1, M747DRAFT_295947-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295947-T1
Unique NameM747DRAFT_295947-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851915.1:693451..694734+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295947-T1 ID=M747DRAFT_295947-T1|Name=M747DRAFT_295947-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1284bp|location=Sequence derived from alignment at KZ851915.1:693451..694734+ (Aspergillus niger ATCC 13496)
TCTCCATCTCCAATCAATCCAGACCCCAATACCACCACCACACCTCACCA
ATCACCCCCTTCCACCCTCACACACGAACAAAATGTCCTCCCTCAACCAA
GACCAAATCAAAACCCTCGAACAATCCCGCCAACGCCTCATCCAACTCAC
CCATTCCCTCGCCTCTCTCATAACCAGTCTCAATCAAAGCGATCCTCTCC
CCTCCTGGTATATATACCCCCCCAATGCCCACTCCATCCAGCCCACCCGG
GTCAACCTTACTGATATGATGATACGGACAGGACATCCCTCCAATCCCAA
GCAACCATCATCTCCAACAACCTCCTCACCATCTCCGACCACCTCTCCGA
TAACCGCGACCTCCTATCCAACATCGTCGCCTACCCCGACGCATCTTATC
CGTCGCGCGTCCCCGCTAATAACGTCGCCCTCGAGCAAGTCCTGCGCACG
AAACTAGATCCCCGCGTTGAGGATTGGGTAGCGCGCGGTCGTCGCGCCGG
GGCGCCAACTACTTCTTCTGATGCTGGAGCCGGAGCACTGGGACAATACC
AGACCAGCAGTGGACAGAGATTATTGAGTGATGATGCGATTGCTGAATTG
TGGGATTGGGCGCCTGTCGCGGCGAATGAGGAGGCCAGGAAGAGGAATTG
GGGCGGCAATTATACGTTGGAGGAGCGGGAGATGGGGATTGAGAATGTAG
TTACGGGGTTGAGCAGGGTGTTGGAGGATGATGATGAGGAGGATGAGAGT
GATAGTGAAGAGGGAGAGGGCGAGGCGGATGAGATGGAGGTTGTCGGGGC
AAGGAGAAGGTCCGGGGCTGGAGCTGGGCTGGAGTTCGATATTGCTGCTG
CGAATACTGGGTCTGGGGCTAATGCTGGTGCGGGGGCTAAGGTGGTTGCG
CCTGTGGTGCCATTGGATGAGATTCTGAGGTTCATGACTACGGGGGCTGT
GCCGGGACAGCGGTGATGTCTACTATGTTGCAATGCTTGTAGTAGGAAAA
AGAGGATTAAAGATTTCTATAACAGGATTGATGCGAAGTAACCAAAAAAA
GCAACTAGCCCCGGCGTCGAGTGGTGGGCGTCTTGCCTGATGGCTTTGGG
GACACCCCCGAGCTGGTGGCAGCAATTGGCGTCTTGGCGGGAGTAGGTGC
TGCCACGGGCTTCTCCTTCTTCTGGGACTTGGCCGGGCTGTTCCAGTAGT
ACAGCATTTGGCCGGCCAGAATGAGGTTGAGAGTGAACCCGGCAATGAAG
CCGTACAGGATCAGCTTGTCGTCAACCTCTTGGA
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Coding sequence (CDS) from alignment at KZ851915.1:693451..694734+

>M747DRAFT_295947-T1 ID=M747DRAFT_295947-T1|Name=M747DRAFT_295947-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1620bp|location=Sequence derived from alignment at KZ851915.1:693451..694734+ (Aspergillus niger ATCC 13496)
ATGTCCTCCCTCAACCAAGACCAAATCAAAACCCTCGAACAATCCCGCCA
ACGCCTCATCCAACTCACCCATTCCCTCGCCTCTCTCATAACCAGTCTCA
ATCAAAGCGATCCTCTCCCCTCCTGGACATCCCTCCAATCCCAAGCAACC
ATCATCTCCAACAACCTCCTCACCATCTCCGACCACCTCTCCGATAACCG
CGACCTCCTATCCAACATCGTCGCCTACCCCGACGCATCTTATCCGTCGC
GCGTCCCCGCTAATAACGTCGCCCTCGAGCAAGTCCTGCGCACGAAACTA
GATCCCCGCGTTGAGGATTGGGTAGCGCGCGGTCGTCGCGCCGGGGCGCC
AACTACTTCTTCTGATGCTGGAGCCGGAGCACTGGGACAATACCAGACCA
GCAGTGGACAGAGATTATTGAGTGATGATGCGATTGCTGAATTGTGGGAT
TGGGCGCCTGTCGCGGCGAATGAGGAGGCCAGGAAGAGGAATTGGGGCGG
CAATTATACGTTGGAGGAGCGGGAGATGGGGATTGAGAATGTAGTTACGG
GGTTGAGCAGGGTGTTGGAGGATGATGATGAGGAGGATGAGAGTGATAGT
GAAGAGGGAGAGGGCGAGGCGGATGAGATGGAGGTTGTCGGGGCAAGGAG
AAGGTCCGGGGCTGGAGCTGGGCTGGAGTTCGATATTGCTGCTGCGAATA
CTGGGTCTGGGGCTAATGCTGGTGCGGGGGCTAAGGTGGTTGCGCCTGTG
GTGCCATTGGATGAGATTCTGAGGTTCATGACTACGGGGGCTGTGCCGGG
ACAGCGGTGAATGTCCTCCCTCAACCAAGACCAAATCAAAACCCTCGAAC
AATCCCGCCAACGCCTCATCCAACTCACCCATTCCCTCGCCTCTCTCATA
ACCAGTCTCAATCAAAGCGATCCTCTCCCCTCCTGGACATCCCTCCAATC
CCAAGCAACCATCATCTCCAACAACCTCCTCACCATCTCCGACCACCTCT
CCGATAACCGCGACCTCCTATCCAACATCGTCGCCTACCCCGACGCATCT
TATCCGTCGCGCGTCCCCGCTAATAACGTCGCCCTCGAGCAAGTCCTGCG
CACGAAACTAGATCCCCGCGTTGAGGATTGGGTAGCGCGCGGTCGTCGCG
CCGGGGCGCCAACTACTTCTTCTGATGCTGGAGCCGGAGCACTGGGACAA
TACCAGACCAGCAGTGGACAGAGATTATTGAGTGATGATGCGATTGCTGA
ATTGTGGGATTGGGCGCCTGTCGCGGCGAATGAGGAGGCCAGGAAGAGGA
ATTGGGGCGGCAATTATACGTTGGAGGAGCGGGAGATGGGGATTGAGAAT
GTAGTTACGGGGTTGAGCAGGGTGTTGGAGGATGATGATGAGGAGGATGA
GAGTGATAGTGAAGAGGGAGAGGGCGAGGCGGATGAGATGGAGGTTGTCG
GGGCAAGGAGAAGGTCCGGGGCTGGAGCTGGGCTGGAGTTCGATATTGCT
GCTGCGAATACTGGGTCTGGGGCTAATGCTGGTGCGGGGGCTAAGGTGGT
TGCGCCTGTGGTGCCATTGGATGAGATTCTGAGGTTCATGACTACGGGGG
CTGTGCCGGGACAGCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MED8M747DRAFT_295947Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295947-T1.utr5p1M747DRAFT_295947-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295947-T1.exon1M747DRAFT_295947-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_295947-T1.exon2M747DRAFT_295947-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295947-T1.cdsM747DRAFT_295947-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295947-T1.utr3p1M747DRAFT_295947-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295947-T1M747DRAFT_295947-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019364
DBxrefPFAM:PF10232
Productmediator of RNA polymerase II transcription subunit 8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851915.1supercontigKZ851915.1:693451..694734 +
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