You are here

Home

M747DRAFT_295983-T1, M747DRAFT_295983-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295983-T1
Unique NameM747DRAFT_295983-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851916.1:126857..129676+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295983-T1 ID=M747DRAFT_295983-T1|Name=M747DRAFT_295983-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2820bp|location=Sequence derived from alignment at KZ851916.1:126857..129676+ (Aspergillus niger ATCC 13496)
GTCGCGCCCACTTGAATCACCTCTATTTCATTCTTCCCTCTTTCATCAAC
TACTACTTATACTTCCCAGCTGCGGGTTGACTCTATAGCTATAGCTACTT
TCTTTTCACTCTATCTAGTTTATCAAGTGAATCCGTGGTTCTGGCTATCT
TTCACCCGTTTAACCCCTCCGTCAGCCCCCCCTGATATCTTGAAACCCCG
CCTAGAGTGTTCTTTGTGCGCTCGAGTTTCCCTTATAGCCCCTCCAACTG
GCTCGTCGCTGCATCTCCAGCTCGACGATTGGACCACGCTACGTCCAGGA
TCATTGTGTGGACCCTATAGGCATGATAGACCCTGTGTGATCGATTGTCT
TTTACTCTTCCTCTTATTGGCGCAACCTACTGCCACCGCTCCTTGAACAT
CATCGACCCCACAGAGCCATCCCGTCACGTTCTCAATGTCGGTCCCTAGG
CCTGGGATGCGTGCTCCCATTCCCCCACGGAGCGGCCCAAGGCCACCTAT
GGGAAGACTGGCCAGTCTGAAATCGCCCAATCCAACTCCCATCAGGCGTC
CCCAGCCAATTTCTCGGCCTCAACCCGCCAGGCCAACTACCCACCCCAAA
ACCTCAACTTGCCCTAACCCGGGCTGTCCTGCTCCTCACATCGTTGAGGA
TGACGGTCAGAAGGTTTGTTCCGGGTGTGGTACTGTCATCAGTGAAGCAA
ACATCGTCTCCGAAGTGACTTTCGGGGAATCGTCGTCGGGTGCGGCAGTC
GTTCAGGGTACCTTCGTCGGCGAAGATCAGTCCCATGTCCGCAGTTATGG
CCCTGGCTTTCAGCGTGGAGGCGCTGAAAGTCGCGAGATTACGGAACAGA
ACGGCAATCGGTACATCACCCAGCTGTCTCGTGCCTTGACTATCCCAGAG
AGTGCCATGAAGGCTGCTGGTCAAGTGTTCAAGCTAGCAGTCGGATTGAA
CTTCATTCAAGGTCGAAGGACCAAGACTGTAGCTGCTGTATGCTTATATA
TTGCCTGCCGTCGGCAGGATGGCAACACCATCATGCTCATCGATTTTGCC
GATGTTCTCATGATCAACGTGTTCAAGCTCGGTCGGACCTACAAAGCACT
ACTCGATGAGTTGCGTCTGGGTGGTAACGTGTTTCTGATGAACCCGATTG
ATCCGGAGAGTTTGATCTACAGGTTTGCCAAACAGCTTGAATTTGGGTCG
GCTACTATGCAGGTGGCGAGTGAGGCGGTCCGTATCGTACAGCGAATGAA
CCGCGATTGGATGACGACGGGTCGTCGTCCCGCTGGTATTTGTGGTGCCG
CCTTGATCCTTGCAGCCCGAATGAACAACTTTCGCCGCACCGTTCGAGAG
GTTGTCTACGTCGTCAAAGTCACCGAGATCACTATCAGCCAACGTTTGAA
CGAGTTCAGCTCCACCGAAAGTGGTGAACTTACAGTCGACCAGTTCCGTT
CCGTGCAGCTGGAGAATGCGCATGACCCACCTTCTTTTGCCAGGGCTAGA
GAAGGAAGGAAGCCTTCACGCTCATTCAAGAGACGGCCCACGGAAACGGC
TGCGGAGATTGAGGGTGATATACAAGAAGCACAGCAACATAGGCGTGTCG
ACTCAGACGGCTTCGCTATTCCTAGTCTTCCTATTGACCCGGCATTACTA
GCGGCCAGCGGCGGTCAACGTCGCCATTCGACTGCCTCTGCTGCAAGCGA
AGCCATTTCGGACGCTGGCGAGGAGCACGCCAAGTCCGGTCGCCAGAAGG
GTCCGAAGAGACCTCCGCTTCCAGCCCCTTCGCCAGATCAGATTGCCTCG
GAAGAGGCTTTGGAGAATGAAATGACCGCGCTATTATCCAAAGGATCGAA
CATGTTCGAGTCTAGTGCCGGTCCTCCAAAGAAGGTCGTGTCTGATAATA
CGGAGATTGACGCTGCTGAGTTTGAGTCGGATCCGGAGGTGTCTAACTGC
TTGCTCTCTCCTGCAGAAGTTGAGATCAAAGAACGGATTTGGGTCCATGA
GAATAAAGATTATCTCCGGGCCCAGCAGGCCAAAGCGCTAAAGCGAGCTC
TGGCGGAGGCTGATTCCCACCCTGGCGCGGACGGTCGCGTGCACAAGCCG
CGAAAGCGCCGCCGCGGTAGACTTGGCGACGTAACTTATCTTGAAGGCGA
GGGTGAAGATGGGGATGGCCGCAGCACTCGGGCTTCGACCCCTGCCGAAG
CTACCCGCCGGATGTTGGAAAGAAGAGGGTTCAGCAAAAAGATCAATTAT
CGTCTTTTGGAGTCACTCTTCGGCGATGAGGGGGCTGACGAAGCCTCCAA
ACCTAAGGAAGAGAGTTTGAGCCGAAGCCAGAGTCGCAGCCAGAGTGTCG
TGTCACGACGCAGCGCCAGTATCGAACCAGAGGCGGCCTCGAGGCGTACC
GGGCTTCTAACCCCCTCAGCTAGCCAACCTGCTGGAGCTTCTTTGTCTGC
CGCGGCTCCGGCGCGTGGCTCAGCGGTACCCGCTGCTCAAGCCCCGACGG
ATCAAGGTGGAAAAGCAAGTGAGAATGAGCAAGTCCTCGGTCCTGCGGAT
GGAGCAAAGAACGAGTATTCAGATGACGAGCAAGAGGATGACTACGACGA
GGATGATGACATGGAGGATGATGGGGTTGACGCGGCGCTTGCTGGAACCT
ATGGTGACTATTACGACGAGGGGAGTGATTATGGTAGTGATTAATTAAAG
TTACGATGATAGCAGGGTTGTATTTCACCGCAAGGCATGTACATAAGAAG
TCCGGCGCCAAGTCGACGGGAATTTGATACCCAGTCATTCCAGGCTTAAA
TCCTGAAAAGCAACAGATGG
back to top

Coding sequence (CDS) from alignment at KZ851916.1:126857..129676+

>M747DRAFT_295983-T1 ID=M747DRAFT_295983-T1|Name=M747DRAFT_295983-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2259bp|location=Sequence derived from alignment at KZ851916.1:126857..129676+ (Aspergillus niger ATCC 13496)
ATGTCGGTCCCTAGGCCTGGGATGCGTGCTCCCATTCCCCCACGGAGCGG
CCCAAGGCCACCTATGGGAAGACTGGCCAGTCTGAAATCGCCCAATCCAA
CTCCCATCAGGCGTCCCCAGCCAATTTCTCGGCCTCAACCCGCCAGGCCA
ACTACCCACCCCAAAACCTCAACTTGCCCTAACCCGGGCTGTCCTGCTCC
TCACATCGTTGAGGATGACGGTCAGAAGGTTTGTTCCGGGTGTGGTACTG
TCATCAGTGAAGCAAACATCGTCTCCGAAGTGACTTTCGGGGAATCGTCG
TCGGGTGCGGCAGTCGTTCAGGGTACCTTCGTCGGCGAAGATCAGTCCCA
TGTCCGCAGTTATGGCCCTGGCTTTCAGCGTGGAGGCGCTGAAAGTCGCG
AGATTACGGAACAGAACGGCAATCGGTACATCACCCAGCTGTCTCGTGCC
TTGACTATCCCAGAGAGTGCCATGAAGGCTGCTGGTCAAGTGTTCAAGCT
AGCAGTCGGATTGAACTTCATTCAAGGTCGAAGGACCAAGACTGTAGCTG
CTGTATGCTTATATATTGCCTGCCGTCGGCAGGATGGCAACACCATCATG
CTCATCGATTTTGCCGATGTTCTCATGATCAACGTGTTCAAGCTCGGTCG
GACCTACAAAGCACTACTCGATGAGTTGCGTCTGGGTGGTAACGTGTTTC
TGATGAACCCGATTGATCCGGAGAGTTTGATCTACAGGTTTGCCAAACAG
CTTGAATTTGGGTCGGCTACTATGCAGGTGGCGAGTGAGGCGGTCCGTAT
CGTACAGCGAATGAACCGCGATTGGATGACGACGGGTCGTCGTCCCGCTG
GTATTTGTGGTGCCGCCTTGATCCTTGCAGCCCGAATGAACAACTTTCGC
CGCACCGTTCGAGAGGTTGTCTACGTCGTCAAAGTCACCGAGATCACTAT
CAGCCAACGTTTGAACGAGTTCAGCTCCACCGAAAGTGGTGAACTTACAG
TCGACCAGTTCCGTTCCGTGCAGCTGGAGAATGCGCATGACCCACCTTCT
TTTGCCAGGGCTAGAGAAGGAAGGAAGCCTTCACGCTCATTCAAGAGACG
GCCCACGGAAACGGCTGCGGAGATTGAGGGTGATATACAAGAAGCACAGC
AACATAGGCGTGTCGACTCAGACGGCTTCGCTATTCCTAGTCTTCCTATT
GACCCGGCATTACTAGCGGCCAGCGGCGGTCAACGTCGCCATTCGACTGC
CTCTGCTGCAAGCGAAGCCATTTCGGACGCTGGCGAGGAGCACGCCAAGT
CCGGTCGCCAGAAGGGTCCGAAGAGACCTCCGCTTCCAGCCCCTTCGCCA
GATCAGATTGCCTCGGAAGAGGCTTTGGAGAATGAAATGACCGCGCTATT
ATCCAAAGGATCGAACATGTTCGAGTCTAGTGCCGGTCCTCCAAAGAAGG
TCGTGTCTGATAATACGGAGATTGACGCTGCTGAGTTTGAGTCGGATCCG
GAGGTGTCTAACTGCTTGCTCTCTCCTGCAGAAGTTGAGATCAAAGAACG
GATTTGGGTCCATGAGAATAAAGATTATCTCCGGGCCCAGCAGGCCAAAG
CGCTAAAGCGAGCTCTGGCGGAGGCTGATTCCCACCCTGGCGCGGACGGT
CGCGTGCACAAGCCGCGAAAGCGCCGCCGCGGTAGACTTGGCGACGTAAC
TTATCTTGAAGGCGAGGGTGAAGATGGGGATGGCCGCAGCACTCGGGCTT
CGACCCCTGCCGAAGCTACCCGCCGGATGTTGGAAAGAAGAGGGTTCAGC
AAAAAGATCAATTATCGTCTTTTGGAGTCACTCTTCGGCGATGAGGGGGC
TGACGAAGCCTCCAAACCTAAGGAAGAGAGTTTGAGCCGAAGCCAGAGTC
GCAGCCAGAGTGTCGTGTCACGACGCAGCGCCAGTATCGAACCAGAGGCG
GCCTCGAGGCGTACCGGGCTTCTAACCCCCTCAGCTAGCCAACCTGCTGG
AGCTTCTTTGTCTGCCGCGGCTCCGGCGCGTGGCTCAGCGGTACCCGCTG
CTCAAGCCCCGACGGATCAAGGTGGAAAAGCAAGTGAGAATGAGCAAGTC
CTCGGTCCTGCGGATGGAGCAAAGAACGAGTATTCAGATGACGAGCAAGA
GGATGACTACGACGAGGATGATGACATGGAGGATGATGGGGTTGACGCGG
CGCTTGCTGGAACCTATGGTGACTATTACGACGAGGGGAGTGATTATGGT
AGTGATTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0017025TBP-class protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0070897transcription preinitiation complex assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_295983M747DRAFT_295983Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295983-T1.utr5p1M747DRAFT_295983-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295983-T1.exon1M747DRAFT_295983-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295983-T1.cdsM747DRAFT_295983-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295983-T1.utr3p1M747DRAFT_295983-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295983-T1M747DRAFT_295983-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092613QA
DBxrefInterPro:IPR036915
DBxrefInterPro:IPR013150
DBxrefInterPro:IPR011665
DBxrefInterPro:IPR013763
DBxrefInterPro:IPR000812
DBxrefPFAM:PF00382
DBxrefPFAM:PF07741
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851916.1supercontigKZ851916.1:126857..129676 +
Powered by Drupal