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M747DRAFT_296058-T1, M747DRAFT_296058-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_296058-T1
Unique NameM747DRAFT_296058-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851916.1:410033..411747-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_296058-T1 ID=M747DRAFT_296058-T1|Name=M747DRAFT_296058-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1715bp|location=Sequence derived from alignment at KZ851916.1:410033..411747- (Aspergillus niger ATCC 13496)
GATCGTGAACCCTGAAATTCTTATTGCTGCTGCTGAATCAATCGTTGTCC
AATTTGACTTTCGACCCTGTTGGACCGTCACTCTCTGTTCTCTGCTTCAA
CGTGCGTCGCTATCGCCCCTTCTTTACATAAGGTGAGTTCCATATGTCTT
GTTTACCTTGCGTCTGCGAACGCATGGTCCATTATGGAGACGTCGCCCTG
TTGACGCGGACCGCTAGCACGGGGTAATTGACCTTACGTTTAGTTTTCGC
TGTCCTCTTCCTCCCACGGCCCCCCTACTCGACCGATCGGTCCACCATCT
AGAATTCCGAATTCCTACTGCAATTGCATTGCATCGGAGACGCTCTCTAG
CGCTCGTTGAATCACCGCAGGCTCAGTCGCTCATTAATCCTATCAACAGT
CGGCGGTCTTCAGGAGACGCCTCCGCTAGTCACAATGGGTGGTCAGGTTT
CCAAGATTATGGGGAAGATTTTTGGTACGAAGGAGATGCGGATTTTGATG
CTGGGTTTGGATGCTGCTGGAAAGACCAGTAAGTTTGATCCTCGATCTCC
GTCCACCCATCGACTATGGCAATGTAAAAACTAACATGTTGCGTTAGCAA
TCCTCTACAAATTGAAGCTCACCAATCAGGACGTCACCACTATCCCTACC
GTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAATGTGAAGTTCAATGT
CTGGGATGTTGGTGGACAGGACAAGATCAGACCCCTCTGGAGACACTACT
ATTCTGGTACTTTTCCCCTTATCGCGTATTTTCAACGAATCGTGGGGCAA
GTGGCTGACATTGGGTGAAATCTTCAGGTACACAAGGTTTGATCTTCGTT
GTGGACTCCAGCGACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCA
CAAGATTATCAACGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTG
CCAATAAGCAGGATGTTCAAGGCCGTAAGTTTCCACCTTTAGGTTATAGA
TATCGACGTCGCGACTGACCAGGATTTTTCTTGCAGACATGAGTCCCGAG
GAAGTTACTCAAGCGCTACAGCTCACCAAGTTGAAGGATAAGCTGTGGTA
CGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGTATCTTCGAGGGCCTGG
TAAGTTACACGCCCCCTCATTATTGCTTTGCCATCTAACGATCGATTGTC
GCAGGCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGAAATAAAACA
GCCGCCGGCCGACACCTGAGCCGCAAAAGTTGGAGGCCTTGGGCACGGCC
TCTCGTGTACAACAGTTTCCTTTGTACCAACTGAACCATCAGAACACCTC
TCGTTTCACGTTCGATTTGATGACAGAAGACGCAGCATTTGGATCCTGTG
TTTGCAATATTCCTTTCACGCGCACGCCGTTCCGCTTTTCCTTTCTTCTT
TATTTCATGATATCCCCACTGTTTCGATGCGGGTCATTTCGAATACCGTC
TCTTAATACTATTTTCCTATTTTCCTTTCTCTGTTGTCTGCTTTTCTTCG
CCCCCCTTCTCGTGTGTAGAAACATTCAAAATAGAAGGAACTTGGACCAG
CACATACCTGCATACATATACTTCCTTTAATGTTTCCTTTTCCTCGCATT
TATTTATATCCCAGTTATTTTTGCCGGCTCGGTTGTTGATAATCACTTTA
GATACTACCAAACCC
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Coding sequence (CDS) from alignment at KZ851916.1:410033..411747-

>M747DRAFT_296058-T1 ID=M747DRAFT_296058-T1|Name=M747DRAFT_296058-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2775bp|location=Sequence derived from alignment at KZ851916.1:410033..411747- (Aspergillus niger ATCC 13496)
GCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGAAATAAACATGAGT
CCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGAAGGATAAGCT
GTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGTATCTTCGAGG
GCCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGCGACACTGCTC
GTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAACGATCGCGAA
ATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGGATGTTCAAGG
CCCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTCACCACTATCC
CTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAATGTGAAGTTC
AATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCCTCTGGAGACA
CTACTATTCTGATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGATTTTT
GGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATGCTGCTGGAAA
GACCAGCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGAAATAAACA
TGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGAAGGAT
AAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGTATCTT
CGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGCGACAC
TGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAACGATC
GCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGGATGTT
CAAGGCCCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTCACCAC
TATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAATGTGA
AGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCCTCTGG
AGACACTACTATTCTGATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGA
TTTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATGCTGCT
GGAAAGACCAGCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGAAAT
AAACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGA
AGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGT
ATCTTCGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGC
GACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAA
CGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGG
ATGTTCAAGGCCCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTC
ACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAA
TGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCC
TCTGGAGACACTACTATTCTGATGGGTGGTCAGGTTTCCAAGATTATGGG
GAAGATTTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATG
CTGCTGGAAAGACCAGCATGGCTCTCCAACAACGTGAAGACGCAACCCCA
GAAATAAACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAA
GTTGAAGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAA
CTGGTATCTTCGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGTGGACT
CCAGCGACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATT
ATCAACGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAA
GCAGGATGTTCAAGGCCCAATCCTCTACAAATTGAAGCTCACCAATCAGG
ACGTCACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTAT
AAGAATGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAG
ACCCCTCTGGAGACACTACTATTCTGATGGGTGGTCAGGTTTCCAAGATT
ATGGGGAAGATTTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTT
GGATGCTGCTGGAAAGACCAGCATGGCTCTCCAACAACGTGAAGACGCAA
CCCCAGAAATAAACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTC
ACCAAGTTGAAGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGA
GGGAACTGGTATCTTCGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGT
GGACTCCAGCGACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACA
AGATTATCAACGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCC
AATAAGCAGGATGTTCAAGGCCCAATCCTCTACAAATTGAAGCTCACCAA
TCAGGACGTCACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCA
CCTATAAGAATGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAG
ATCAGACCCCTCTGGAGACACTACTATTCTGATGGGTGGTCAGGTTTCCA
AGATTATGGGGAAGATTTTTGGTACGAAGGAGATGCGGATTTTGATGCTG
GGTTTGGATGCTGCTGGAAAGACCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARF6M747DRAFT_296058Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296058-T1M747DRAFT_296058-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296058-T1.cdsM747DRAFT_296058-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296058-T1.utr3p1M747DRAFT_296058-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296058-T1.exon6M747DRAFT_296058-T1.exon6Aspergillus niger ATCC 13496exon
M747DRAFT_296058-T1.exon5M747DRAFT_296058-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_296058-T1.exon4M747DRAFT_296058-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_296058-T1.exon3M747DRAFT_296058-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_296058-T1.exon2M747DRAFT_296058-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_296058-T1.exon1M747DRAFT_296058-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296058-T1.utr5p2M747DRAFT_296058-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_296058-T1.utr5p1M747DRAFT_296058-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR041838
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR006689
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Product Arf Arf6
ProductADP-ribosylation factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851916.1supercontigKZ851916.1:410033..411747 -
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