You are here

Home

M747DRAFT_296173-T1, M747DRAFT_296173-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_296173-T1
Unique NameM747DRAFT_296173-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851917.1:96434..98198+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_296173-T1 ID=M747DRAFT_296173-T1|Name=M747DRAFT_296173-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1765bp|location=Sequence derived from alignment at KZ851917.1:96434..98198+ (Aspergillus niger ATCC 13496)
GCTTCTGACTAGTACTGACTACCACCATCTCATGCAGAGACATTGTCCTC
ATTGCATGATGGTTCTGTTGGTGTCAGAATGGAGAGACACTACTGCATTC
TACTTACACTATAGAAATACCCCCACCCGGCCTGCCATTCGCTGCGGCGG
CCCACTCCGCGCGATAAGGAAATCTGAAGTTTTTTTGCTTTAGTTGCTTT
TTAGTGTCGCCCTCGCGGTCTGGCCTCGTCGGCCTGCTTTAAATCTCCTC
TCGTCCCTGCGACCTGTTTCTGCTTTCTTTTCCCTTTTCCTTCTTTGCGC
CCTTTGGTCCTGGCAGTGAACGACTTCGGAGCTTTGCGTTCACATTTGCT
GGCGAAAAGCTCCATTTGATACCCTTCATCGCATTTCCGTTTCTGTTTCT
GTTTCCAGTTCCCGTGCGCTCGTCGCATTCTGCGGCTTCCCCGCCATGTC
TGCCGATAATGAAAAGTCCGCGGCCGTTGCCGACGTGCAGCCCCAACCCG
AGTATTCCACGGAAAAGACAGAGCAGGTGCATACTGTGACCGAAACGTCG
GAGCAGACCAGTCAACCGCATGATCAGGAGGCCCAGCAGGAGCAGCAGCC
GACCCAGGGTCGCGCGGCCAGGCTATTTGCCTACATGAAGACCCGCGATT
TCTGGTTGGTCTTGATTTTAGGGTGAGTACATCTCCTTCTTCTTCTTCTT
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTACGGAGAA
AAATACTGTCAGATACTAATCTACAATAGTCAAATCATCGCGCTGGCCGA
CATCAGCTCCTCCACCTTCTCGACCCTCCTCTCCAACGCGGGCAACAGTA
TCCCCGCCTTCCAGACCCTTTGGATCTACATCCTGCTCAATCTTGTCTAC
ACCAGCATTACCCTCTACAAGTACGGCTTCAAGAAATGGTTTCAAATGCT
TTACCGTGACTGCTGGCGGTACTTCATTCTTGCCTTCCTGGACGTCGAAG
GCAACTACTTCATGGTGCTCGCCTACCGCTATACCTCGCTGCTCAGCGCT
GAGCTTTTCAGCTTCTGGACCATCATCTGTGTCGCCATCATCTCCTTCAT
CTTCCTGCGCGTCCGCTACCACATCACCCAGTACCTTGGCATCTTCCTCG
CCTGCGGTGGCCTGGGCATGCTCATCGCCTCCGACTACCTGCGCGGTGCC
AACTACCCCGCCGAAGATCAAGTGAAGGGTGACCTGTTTGCCCTCCTAGC
CTGCACTATCTACGCCTTCAGCAACCTATTTGAAGAGTTCATGGTTTCCA
AGCGGCCCATGTATGAGGTCGTCGGCCAGATGGGCTTCTGGGGTATGTTC
ATCAATGGCGTGCAGTGCGCCATCTTCGACCGAAGCTCCTTCCACGGCGC
CACCTGGGACAAGAAAGTCGGCGGGTACATTGCGGGCTACACCATAGTGC
TGTTTATCTTCTACACGTTGGCGCCCATCATGCTACGCGTGTCATCGGCC
ATGTTTTTCAACATCTCCTTGCTGACGATGAACTTCTGGGGCTTGATCAT
CGGTATCCAGGTGTTCCATTACTCCGTGCAATTCCTGTATCCCATTGCCT
TTGTGCTGATCGTCATTGGCCTGTTTGTGTACTTCATCATGGAGGGCGAG
ATGGGTGAGGCGAAGAAGCCGTGGCTAGGAAAGGATCAGGAGCGCGGAGT
GGATGGTGTGGGAACGGGTCGTCGCGCGCAGCAAACGGGACATGCAATTG
TCTAGATGTGGGTGG
back to top

Coding sequence (CDS) from alignment at KZ851917.1:96434..98198+

>M747DRAFT_296173-T1 ID=M747DRAFT_296173-T1|Name=M747DRAFT_296173-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2406bp|location=Sequence derived from alignment at KZ851917.1:96434..98198+ (Aspergillus niger ATCC 13496)
ATGTCTGCCGATAATGAAAAGTCCGCGGCCGTTGCCGACGTGCAGCCCCA
ACCCGAGTATTCCACGGAAAAGACAGAGCAGGTGCATACTGTGACCGAAA
CGTCGGAGCAGACCAGTCAACCGCATGATCAGGAGGCCCAGCAGGAGCAG
CAGCCGACCCAGGGTCGCGCGGCCAGGCTATTTGCCTACATGAAGACCCG
CGATTTCTGGTTGGTCTTGATTTTAGGTCAAATCATCGCGCTGGCCGACA
TCAGCTCCTCCACCTTCTCGACCCTCCTCTCCAACGCGGGCAACAGTATC
CCCGCCTTCCAGACCCTTTGGATCTACATCCTGCTCAATCTTGTCTACAC
CAGCATTACCCTCTACAAGTACGGCTTCAAGAAATGGTTTCAAATGCTTT
ACCGTGACTGCTGGCGGTACTTCATTCTTGCCTTCCTGGACGTCGAAGGC
AACTACTTCATGGTGCTCGCCTACCGCTATACCTCGCTGCTCAGCGCTGA
GCTTTTCAGCTTCTGGACCATCATCTGTGTCGCCATCATCTCCTTCATCT
TCCTGCGCGTCCGCTACCACATCACCCAGTACCTTGGCATCTTCCTCGCC
TGCGGTGGCCTGGGCATGCTCATCGCCTCCGACTACCTGCGCGGTGCCAA
CTACCCCGCCGAAGATCAAGTGAAGGGTGACCTGTTTGCCCTCCTAGCCT
GCACTATCTACGCCTTCAGCAACCTATTTGAAGAGTTCATGGTTTCCAAG
CGGCCCATGTATGAGGTCGTCGGCCAGATGGGCTTCTGGGGTATGTTCAT
CAATGGCGTGCAGTGCGCCATCTTCGACCGAAGCTCCTTCCACGGCGCCA
CCTGGGACAAGAAAGTCGGCGGGTACATTGCGGGCTACACCATAGTGCTG
TTTATCTTCTACACGTTGGCGCCCATCATGCTACGCGTGTCATCGGCCAT
GTTTTTCAACATCTCCTTGCTGACGATGAACTTCTGGGGCTTGATCATCG
GTATCCAGGTGTTCCATTACTCCGTGCAATTCCTGTATCCCATTGCCTTT
GTGCTGATCGTCATTGGCCTGTTTGTGTACTTCATCATGGAGGGCGAGAT
GGGTGAGGCGAAGAAGCCGTGGCTAGGAAAGGATCAGGAGCGCGGAGTGG
ATGGTGTGGGAACGGGTCGTCGCGCGCAGCAAACGGGACATGCAATTGTC
TAGATGTCTGCCGATAATGAAAAGTCCGCGGCCGTTGCCGACGTGCAGCC
CCAACCCGAGTATTCCACGGAAAAGACAGAGCAGGTGCATACTGTGACCG
AAACGTCGGAGCAGACCAGTCAACCGCATGATCAGGAGGCCCAGCAGGAG
CAGCAGCCGACCCAGGGTCGCGCGGCCAGGCTATTTGCCTACATGAAGAC
CCGCGATTTCTGGTTGGTCTTGATTTTAGGTCAAATCATCGCGCTGGCCG
ACATCAGCTCCTCCACCTTCTCGACCCTCCTCTCCAACGCGGGCAACAGT
ATCCCCGCCTTCCAGACCCTTTGGATCTACATCCTGCTCAATCTTGTCTA
CACCAGCATTACCCTCTACAAGTACGGCTTCAAGAAATGGTTTCAAATGC
TTTACCGTGACTGCTGGCGGTACTTCATTCTTGCCTTCCTGGACGTCGAA
GGCAACTACTTCATGGTGCTCGCCTACCGCTATACCTCGCTGCTCAGCGC
TGAGCTTTTCAGCTTCTGGACCATCATCTGTGTCGCCATCATCTCCTTCA
TCTTCCTGCGCGTCCGCTACCACATCACCCAGTACCTTGGCATCTTCCTC
GCCTGCGGTGGCCTGGGCATGCTCATCGCCTCCGACTACCTGCGCGGTGC
CAACTACCCCGCCGAAGATCAAGTGAAGGGTGACCTGTTTGCCCTCCTAG
CCTGCACTATCTACGCCTTCAGCAACCTATTTGAAGAGTTCATGGTTTCC
AAGCGGCCCATGTATGAGGTCGTCGGCCAGATGGGCTTCTGGGGTATGTT
CATCAATGGCGTGCAGTGCGCCATCTTCGACCGAAGCTCCTTCCACGGCG
CCACCTGGGACAAGAAAGTCGGCGGGTACATTGCGGGCTACACCATAGTG
CTGTTTATCTTCTACACGTTGGCGCCCATCATGCTACGCGTGTCATCGGC
CATGTTTTTCAACATCTCCTTGCTGACGATGAACTTCTGGGGCTTGATCA
TCGGTATCCAGGTGTTCCATTACTCCGTGCAATTCCTGTATCCCATTGCC
TTTGTGCTGATCGTCATTGGCCTGTTTGTGTACTTCATCATGGAGGGCGA
GATGGGTGAGGCGAAGAAGCCGTGGCTAGGAAAGGATCAGGAGCGCGGAG
TGGATGGTGTGGGAACGGGTCGTCGCGCGCAGCAAACGGGACATGCAATT
GTCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_296173M747DRAFT_296173Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296173-T1.utr5p1M747DRAFT_296173-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296173-T1.exon1M747DRAFT_296173-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_296173-T1.exon2M747DRAFT_296173-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296173-T1.cdsM747DRAFT_296173-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296173-T1.utr3p1M747DRAFT_296173-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296173-T1M747DRAFT_296173-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009262
DBxrefPFAM:PF06027
ProductDUF914 domain membrane protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851917.1supercontigKZ851917.1:96434..98198 +
Powered by Drupal