You are here

Home

M747DRAFT_296263-T1, M747DRAFT_296263-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_296263-T1
Unique NameM747DRAFT_296263-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851917.1:486860..488176+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_296263-T1 ID=M747DRAFT_296263-T1|Name=M747DRAFT_296263-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1317bp|location=Sequence derived from alignment at KZ851917.1:486860..488176+ (Aspergillus niger ATCC 13496)
CAGGAATGTATATGACGATTCGTCTATAGACAGAATCTCAGTCTAGGATA
GACTTTCGATACATCAAGCCTCATCACATTAGCATTGTACACAATGATTA
CTTACTGCCATGCAAACCGGTCGCTGGCAGCGAAAACTGGAATTGGGAGA
AGCACCCAAATCCATCCAATCAGATGCGATGACTTTCGAATCAAAAGCAC
GCACAATTCCGACCAATCAGTAATCCCCGGAATTGAATCCGCTTCGCATC
TTATAGCCTGAGGCATCAACACAACCTTTCACAGCCCCCCACCACCGTCC
AATCCGAGCTGATATCACCAATACCACTGACCACCATCAATTCAACAACA
ACACAATGGATAGCCTCAACTTCCCCACCCAAGACCGCGCCTTCTTGGAA
CCCCATCTCCCACCCAAATATGGCAACCCATCATCATCATCATCTCTCCC
CTTCACCACCCTCACCTTCGCCACATCCCTCGACTCACAATTAGCTCTTT
CCCCGGGCACCCGGACCGTGCTGTCCGGCCCGCAATCCAAAGCCATGACG
CACTATCTACGCTCACGCCATGACGCCATTCTCATCGGCGTAGGCACTGC
CGTGGCTGACAACCCGGGCCTGAACTGTCGATTGGCAGGGGTAGGCGGAT
ACGGCTCCGAAGGTTTAGCGGGCCAGCCCCGACCAATTATCATCGACCCC
TCAGCCAGATGGGAGTTTACGGCGCACTCGAAAATCTTCGAGCTGGCGAG
GAATGGGCGGGGCAGGGCTCCGTTCATCATTACGGCTGCGGAGACGGTGC
CTTCTGCACCTCAGAGGGAGGTTTTGGAGAGTCATGGGGGGAAGTTTATT
GCGTTGCCGGTGGGGGTCGGTTCGGATGGTGCGCATCGGATCGATTGGAC
TGCGTTGTTGGAGTGTCTTGTGCGTGAGGGGTTACGGAGCGTGATGATTG
AGGGGGGCGGGTCTATTATTAACTCGTTGCTTGAGCCGGGGTGTCAGACG
CTGGTGGATTCAGTGATTGTTACGATTGCTCCAACTTGGCTGGGGCAGGG
AGGTGTGGTGGTTTCGCCAAGGAGGAGGGTTGAAGGGGGTATGGTTGTTC
CAGCTTCGAGATTGACCGGGGTCAAATGGTATCCGTTTGGGGAGGATGTG
GTGCTTTGTGGGAGGATCAAGGGGTCTGATTAGGGGGGTCTCCGTTCGCC
AAAACGCATATTCATTCATGCAGTATAGAAAAGATGGTTCCTGAGTCATG
ATGCTTCCCTATGAATCAGATTTCCCTGTTGCAGCATATTCACGGTATCC
AGTATGTTGTCCATGCA
back to top

Coding sequence (CDS) from alignment at KZ851917.1:486860..488176+

>M747DRAFT_296263-T1 ID=M747DRAFT_296263-T1|Name=M747DRAFT_296263-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=828bp|location=Sequence derived from alignment at KZ851917.1:486860..488176+ (Aspergillus niger ATCC 13496)
ATGGATAGCCTCAACTTCCCCACCCAAGACCGCGCCTTCTTGGAACCCCA
TCTCCCACCCAAATATGGCAACCCATCATCATCATCATCTCTCCCCTTCA
CCACCCTCACCTTCGCCACATCCCTCGACTCACAATTAGCTCTTTCCCCG
GGCACCCGGACCGTGCTGTCCGGCCCGCAATCCAAAGCCATGACGCACTA
TCTACGCTCACGCCATGACGCCATTCTCATCGGCGTAGGCACTGCCGTGG
CTGACAACCCGGGCCTGAACTGTCGATTGGCAGGGGTAGGCGGATACGGC
TCCGAAGGTTTAGCGGGCCAGCCCCGACCAATTATCATCGACCCCTCAGC
CAGATGGGAGTTTACGGCGCACTCGAAAATCTTCGAGCTGGCGAGGAATG
GGCGGGGCAGGGCTCCGTTCATCATTACGGCTGCGGAGACGGTGCCTTCT
GCACCTCAGAGGGAGGTTTTGGAGAGTCATGGGGGGAAGTTTATTGCGTT
GCCGGTGGGGGTCGGTTCGGATGGTGCGCATCGGATCGATTGGACTGCGT
TGTTGGAGTGTCTTGTGCGTGAGGGGTTACGGAGCGTGATGATTGAGGGG
GGCGGGTCTATTATTAACTCGTTGCTTGAGCCGGGGTGTCAGACGCTGGT
GGATTCAGTGATTGTTACGATTGCTCCAACTTGGCTGGGGCAGGGAGGTG
TGGTGGTTTCGCCAAGGAGGAGGGTTGAAGGGGGTATGGTTGTTCCAGCT
TCGAGATTGACCGGGGTCAAATGGTATCCGTTTGGGGAGGATGTGGTGCT
TTGTGGGAGGATCAAGGGGTCTGATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:00087035-amino-6-(5-phosphoribosylamino)uracil reductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009231riboflavin biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_296263M747DRAFT_296263Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296263-T1.utr5p1M747DRAFT_296263-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296263-T1.exon1M747DRAFT_296263-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296263-T1.cdsM747DRAFT_296263-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296263-T1.utr3p1M747DRAFT_296263-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296263-T1M747DRAFT_296263-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR002734
DBxrefInterPro:IPR024072
DBxrefPFAM:PF01872
Productbacterial bifunctional deaminase-reductase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851917.1supercontigKZ851917.1:486860..488176 +
Powered by Drupal