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M747DRAFT_296414-T1, M747DRAFT_296414-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_296414-T1
Unique NameM747DRAFT_296414-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851918.1:444527..445794-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_296414-T1 ID=M747DRAFT_296414-T1|Name=M747DRAFT_296414-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1268bp|location=Sequence derived from alignment at KZ851918.1:444527..445794- (Aspergillus niger ATCC 13496)
CACCATGAGCCATAAATACAAATATCTGGACAAGCTGTTGCCCTTTGTTC
AAGTTATTCGTTCTCTGTGGACCACGATCCCAACCATTGATCTCTTTTGT
TTGTTCCTCAGCGGATAAAGTCATACGAAAATGAAATTCCTCAAAGCCAA
GGGTAGCTTGCTGTCGTCTGGCATATACCTCATTGCATTGGCCCCCTTTG
TCAACGCAAAATGCGCTCTTCCGTCGACATATAGTTGGACTTCGACCGAT
GCTCTCGCCACCCCAAAGTCCGGATGGACTGCACTCAAGGACTTCACCGA
TGTCGTCTCTAACGGCAAACATATTGTCTATGCGTCCACTACCGACACAC
AGGGAAATTACGGCTCCATGGGCTTTGGCGCCTTTTCGGACTGGTCGGAC
ATGGCATCCGCTAGTCAAACGGCCACAAGCTTCAGCGCCGTAGCTCCAAC
CTTGTTCTACTTCCAGCCAAAGAGTATCTGGGTTCTGGCCTACCAATGGG
GCTCCAGCACTTTCACCTACCGCACCTCTCAAGATCCCACCAATGTCAAC
GGCTGGTCATCCGAGCAAGCTCTTTTCACGGGCAAAATCAGCGGCTCAAG
TACCGGTGCCATTGATCAGACTGTGATTGGTGATGATACGAATATGTATC
TTTTCTTTGCCGGCGACAATGGCAAGATCTACCGATCCAGCATGTCTATC
AATGACTTCCCCGGAAGCTTCGGCAGCCAGTACGAGGAGATCCTCAGCGG
CGCGACCAACGATTTGTTCGAGGCGGTCCAAGTGTACACCGTCGACGGCG
GCGAGGGTGACAGCAAGTACCTCATGATCGTCGAGGCGATCGGTTCCACC
GGACATCGTTATTTCCGCTCCTTCACGGCCAGCAGTCTCGGCGGAGAGTG
GACAGCCCAGGCGGCAAGTGAAGATCAACCCTTCGCGGGCAAAGCCAACA
GTGGCGCCACCTGGACCGACGACATCAGTCATGGTGACTTGGTTCGCAAC
AACCCTGATCAAACCATGACGGTCGATCCTTGCAACCTCCAGCTTCTCTA
CCAGGGCCATGACCCCAACAGCAATAGTGACTACAACCTCTTGCCCTGGA
AGCCAGGAGTTCTTACCTTGAAGCAGTGAAAGGCTTATCATTTGGTTGCA
GACCGGGGTTTTCTTCCCCTTCCTTGAGTAGTATTGTTGGTGGAAGACAG
CGGGATGGGGAGTGAATACTATCTTGGGCTCAATTGAGGTGGAATCCTGT
CAGACTGTGTACATAGGC
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Coding sequence (CDS) from alignment at KZ851918.1:444527..445794-

>M747DRAFT_296414-T1 ID=M747DRAFT_296414-T1|Name=M747DRAFT_296414-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=999bp|location=Sequence derived from alignment at KZ851918.1:444527..445794- (Aspergillus niger ATCC 13496)
ATGAAATTCCTCAAAGCCAAGGGTAGCTTGCTGTCGTCTGGCATATACCT
CATTGCATTGGCCCCCTTTGTCAACGCAAAATGCGCTCTTCCGTCGACAT
ATAGTTGGACTTCGACCGATGCTCTCGCCACCCCAAAGTCCGGATGGACT
GCACTCAAGGACTTCACCGATGTCGTCTCTAACGGCAAACATATTGTCTA
TGCGTCCACTACCGACACACAGGGAAATTACGGCTCCATGGGCTTTGGCG
CCTTTTCGGACTGGTCGGACATGGCATCCGCTAGTCAAACGGCCACAAGC
TTCAGCGCCGTAGCTCCAACCTTGTTCTACTTCCAGCCAAAGAGTATCTG
GGTTCTGGCCTACCAATGGGGCTCCAGCACTTTCACCTACCGCACCTCTC
AAGATCCCACCAATGTCAACGGCTGGTCATCCGAGCAAGCTCTTTTCACG
GGCAAAATCAGCGGCTCAAGTACCGGTGCCATTGATCAGACTGTGATTGG
TGATGATACGAATATGTATCTTTTCTTTGCCGGCGACAATGGCAAGATCT
ACCGATCCAGCATGTCTATCAATGACTTCCCCGGAAGCTTCGGCAGCCAG
TACGAGGAGATCCTCAGCGGCGCGACCAACGATTTGTTCGAGGCGGTCCA
AGTGTACACCGTCGACGGCGGCGAGGGTGACAGCAAGTACCTCATGATCG
TCGAGGCGATCGGTTCCACCGGACATCGTTATTTCCGCTCCTTCACGGCC
AGCAGTCTCGGCGGAGAGTGGACAGCCCAGGCGGCAAGTGAAGATCAACC
CTTCGCGGGCAAAGCCAACAGTGGCGCCACCTGGACCGACGACATCAGTC
ATGGTGACTTGGTTCGCAACAACCCTGATCAAACCATGACGGTCGATCCT
TGCAACCTCCAGCTTCTCTACCAGGGCCATGACCCCAACAGCAATAGTGA
CTACAACCTCTTGCCCTGGAAGCCAGGAGTTCTTACCTTGAAGCAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0046373L-arabinose metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0046556alpha-L-arabinofuranosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_296414M747DRAFT_296414Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296414-T1.cdsM747DRAFT_296414-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296414-T1.utr3p1M747DRAFT_296414-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296414-T1.exon1M747DRAFT_296414-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296414-T1.utr5p1M747DRAFT_296414-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296414-T1M747DRAFT_296414-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteCAZy:GH62
DBxrefInterPro:IPR023296
DBxrefInterPro:IPR005193
DBxrefPFAM:PF03664
Product4-beta-D-arabinoxylan arabinofuranohydrolase axhA
Product1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851918.1supercontigKZ851918.1:444527..445794 -
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