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M747DRAFT_296675-T1, M747DRAFT_296675-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_296675-T1
Unique NameM747DRAFT_296675-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851920.1:175127..176476-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_296675-T1 ID=M747DRAFT_296675-T1|Name=M747DRAFT_296675-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1350bp|location=Sequence derived from alignment at KZ851920.1:175127..176476- (Aspergillus niger ATCC 13496)
TCAACCAGCGGCAACCGTCAAGATGGTGAGTTTTGCTGTAATTCTCAAGA
GACTGGGAACCGACTTCAACGCAAATTCCCCCATCGCCTGAACGTAAATT
TCAGGTCATCCCACATGGGCGACCGCACTGTGGGATTGGAAACGGGTCTT
TGCAAGATGCTTCGGACGGTCTTTCTCTGAAGCGCAAATTGCTGACTCGA
CTCTGTCTTGTAGCCTTTCCACAAGCTCGTCAAGAACAGCGCTTACTACA
GGTAAGAAATTCACAAGACACCTCATTTGGCAAAATTTGGCATAAACTAA
TAAAATTCCTTCTATAGCCGCTACCAGACCAAGTACCGTCGTCGCCGTGA
GGGTAAGACCGACTACTATGCCCGTAAGCGCTTGATCACCCAGGCCAAGA
ACAAGTACAACGCCCCCAAGTACCGCCTGGTCGTCCGCTTCACCAACCGC
GACATCATCACCCAGATCGTCTACTCTGAGATCTCCGGTGACAAGGTCTT
CGCCAGCGCCTACTCCCACGAGCTCAAGCGCTATGGCATCACCAACGGTC
TGACCAACTGGGCTGCCGCCTACGCCACCGGTCTCCTCCTTGCCCGCCGT
ACCCTCAAGAAGCTCGGCCTGGATGAGCAGTTCCCCGGTGTTGAGGAGGC
CGATGGTGAGTACACCCTCACCGAGGCTGCTGAGACCGACGAGGGCTCCC
GCCGCCCCTTCAAGGCTTTCCTTGATGTTGGTCTTGCTCGTACCTCCACT
GGTGCCCGTGTCTTCGGTGCCATGAAGGGTGCCTCCGACGGTGGTATCTT
CGTCCCCCACTCCGAGAGCCGCTTCCCCGGTTTCGACATCGAGTCCGAGG
AGCTCGACGCTGAGACTCTCCGCAACTACATCTTCGGTGGCCACGTCGCT
GAGTACATGGAGGGTCTTGCCGACGACGATGAGGAGCGTTTCACCTCCCA
GTTCCACAAGTACCAGGAGGCTGGTATTGAGGCTGGTGACATTGAGGAGC
TCTACACTGAGGCCCACAAGGCCATCCGTGAGGACCCCTTCAAGAAGGAC
GAGGATGCTGGTGAGAAGAAGACCAAGGAGGAGTGGAAGGCCGAGAGCAA
GAAGTTCCGCCAGCAGCGCCTCACCCGCGAGCAGCGCAAGGAGCGTGTTG
AGCAGAAGATCCGTGAGCTTGCTGCTTAAATGTCGGACTTCTAAGGCCGA
TCGTGCTTGATGGTTTTACCCCAAAAAAGAAACTTTGAGTGCGATAGTCA
AAAAGTTTGATAATTCTCTTTGAAATATAGGGGAATTAAGGTTCTTCTTG
CCCACTACTACTTTTTTTTGTGATATCCAGTAGTCTTGATGAAATTTTCA
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Coding sequence (CDS) from alignment at KZ851920.1:175127..176476-

>M747DRAFT_296675-T1 ID=M747DRAFT_296675-T1|Name=M747DRAFT_296675-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2709bp|location=Sequence derived from alignment at KZ851920.1:175127..176476- (Aspergillus niger ATCC 13496)
CCGCTACCAGACCAAGTACCGTCGTCGCCGTGAGGGTAAGACCGACTACT
ATGCCCGTAAGCGCTTGATCACCCAGGCCAAGAACAAGTACAACGCCCCC
AAGTACCGCCTGGTCGTCCGCTTCACCAACCGCGACATCATCACCCAGAT
CGTCTACTCTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCTACTCCC
ACGAGCTCAAGCGCTATGGCATCACCAACGGTCTGACCAACTGGGCTGCC
GCCTACGCCACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAAGCTCGG
CCTGGATGAGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGTACACCC
TCACCGAGGCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTCAAGGCT
TTCCTTGATGTTGGTCTTGCTCGTACCTCCACTGGTGCCCGTGTCTTCGG
TGCCATGAAGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACTCCGAGA
GCCGCTTCCCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCTGAGACT
CTCCGCAACTACATCTTCGGTGGCCACGTCGCTGAGTACATGGAGGGTCT
TGCCGACGACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGTACCAGG
AGGCTGGTATTGAGGCTGGTGACATTGAGGAGCTCTACACTGAGGCCCAC
AAGGCCATCCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGGTGAGAA
GAAGACCAAGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCCAGCAGC
GCCTCACCCGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATCCGTGAG
CTTGCTGCTTAACCTTTCCACAAGCTCGTCAAGAACAGCGCTTACTACAG
ATGCCGCTACCAGACCAAGTACCGTCGTCGCCGTGAGGGTAAGACCGACT
ACTATGCCCGTAAGCGCTTGATCACCCAGGCCAAGAACAAGTACAACGCC
CCCAAGTACCGCCTGGTCGTCCGCTTCACCAACCGCGACATCATCACCCA
GATCGTCTACTCTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCTACT
CCCACGAGCTCAAGCGCTATGGCATCACCAACGGTCTGACCAACTGGGCT
GCCGCCTACGCCACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAAGCT
CGGCCTGGATGAGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGTACA
CCCTCACCGAGGCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTCAAG
GCTTTCCTTGATGTTGGTCTTGCTCGTACCTCCACTGGTGCCCGTGTCTT
CGGTGCCATGAAGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACTCCG
AGAGCCGCTTCCCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCTGAG
ACTCTCCGCAACTACATCTTCGGTGGCCACGTCGCTGAGTACATGGAGGG
TCTTGCCGACGACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGTACC
AGGAGGCTGGTATTGAGGCTGGTGACATTGAGGAGCTCTACACTGAGGCC
CACAAGGCCATCCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGGTGA
GAAGAAGACCAAGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCCAGC
AGCGCCTCACCCGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATCCGT
GAGCTTGCTGCTTAACCTTTCCACAAGCTCGTCAAGAACAGCGCTTACTA
CAGATGCCGCTACCAGACCAAGTACCGTCGTCGCCGTGAGGGTAAGACCG
ACTACTATGCCCGTAAGCGCTTGATCACCCAGGCCAAGAACAAGTACAAC
GCCCCCAAGTACCGCCTGGTCGTCCGCTTCACCAACCGCGACATCATCAC
CCAGATCGTCTACTCTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCT
ACTCCCACGAGCTCAAGCGCTATGGCATCACCAACGGTCTGACCAACTGG
GCTGCCGCCTACGCCACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAA
GCTCGGCCTGGATGAGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGT
ACACCCTCACCGAGGCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTC
AAGGCTTTCCTTGATGTTGGTCTTGCTCGTACCTCCACTGGTGCCCGTGT
CTTCGGTGCCATGAAGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACT
CCGAGAGCCGCTTCCCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCT
GAGACTCTCCGCAACTACATCTTCGGTGGCCACGTCGCTGAGTACATGGA
GGGTCTTGCCGACGACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGT
ACCAGGAGGCTGGTATTGAGGCTGGTGACATTGAGGAGCTCTACACTGAG
GCCCACAAGGCCATCCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGG
TGAGAAGAAGACCAAGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCC
AGCAGCGCCTCACCCGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATC
CGTGAGCTTGCTGCTTAACCTTTCCACAAGCTCGTCAAGAACAGCGCTTA
CTACAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:00080975S rRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL5M747DRAFT_296675Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296675-T1M747DRAFT_296675-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296675-T1.cdsM747DRAFT_296675-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296675-T1.utr3p1M747DRAFT_296675-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296675-T1.exon3M747DRAFT_296675-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_296675-T1.exon2M747DRAFT_296675-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_296675-T1.exon1M747DRAFT_296675-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296675-T1.utr5p1M747DRAFT_296675-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG0926419M
DBxrefInterPro:IPR025607
DBxrefInterPro:IPR005485
DBxrefPFAM:PF17144
DBxrefPFAM:PF14204
Product60S ribosomal protein L5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851920.1supercontigKZ851920.1:175127..176476 -
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