You are here

Home

M747DRAFT_296725-T1, M747DRAFT_296725-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_296725-T1
Unique NameM747DRAFT_296725-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851920.1:352183..353287-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_296725-T1 ID=M747DRAFT_296725-T1|Name=M747DRAFT_296725-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1105bp|location=Sequence derived from alignment at KZ851920.1:352183..353287- (Aspergillus niger ATCC 13496)
CCTCGACTTTTCCACCCCCGATCCGGTCCATTGAGTCCTACGCCCAGCCG
TCACCATGGCGTCCAGAGAGCCCCAGTACGTTGATACCTTGCCAATCCCC
CCAATCGACCACTTCCACGGGTTACCCTTGACTACTACACCACCACATAT
AATACGACACATATACATACATGCATGCAACACAATTGGATTAGAACAAC
TCGTTTCTAACGGAATATGACTGCTTCAGGTTTAACCAGCAGGTGCTGGT
CGACACGACCCCCATGCCCGATCACATCCCCAAGGTGGAGGAGATCGGTG
CTACGTCGGCGCCGCTGTACAGCGCGGCGTACTTTATCGGAGACCGCTGC
AAGCCCTACAACGACGACTTCATGAAGTGCAAGGACGAGTCGAACGGGCG
CGGAGAGCTGGACTGTCTGAAGGAGGGTAGAAAGGTGACGCGCTGTGCGG
CTAGCGTGTATGTTGTCCCCATGCTCTATATTCAATTCGCCCATTGAGTG
ATGAGAATCACCGGAGAAATGGATACTGATTACAATGGGGATCCCTGCAG
AATCAAGGACATCAACACCCACTGCCTGAAGTCGTTCACCGCTCACTGGG
AGTGCCTCGAGAACAACAACCACAAGCTCTGGGAGTGCCGTGCGCAGGAG
ATGAAGCTGAACAGCTGTGTTTTCGAGAAGCTGGTTCGTGATACCTTCTT
AATAGATATCCTGTTTCGGATCCTTGTTGGCGTACCACAGAGAAATACTA
ATCCGGTTGTATAGGGCCTGAAGAAGGAAATCCCCGGAACCCCCGAGAAT
GTCGTCCCCGTGCACTTGCGCCCCAAGCAGCTCTACTCGGACTGGCCTGG
TCGGCAATATTAAAATTACAAAATGAAATCTTGAGGGGAGCATATATCAT
TGTGTTTTTCTTAACTGAACTACTAACTTAACGTGTCTTTTGTATTCCGG
TGTTTTCCTTTTGTTCTTCCGTCTCTCTGGTTGACGTCTGTTTGTGTATA
TATTAGCATCAGGAATGTCATTGGTTCCGCGAGTCAGTCACTTGGATTCA
AGTAAGAATATTGCTTTTGAGTTACTATAAATATAGATTCAATTGGTATC
AGATG
back to top

Coding sequence (CDS) from alignment at KZ851920.1:352183..353287-

>M747DRAFT_296725-T1 ID=M747DRAFT_296725-T1|Name=M747DRAFT_296725-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1920bp|location=Sequence derived from alignment at KZ851920.1:352183..353287- (Aspergillus niger ATCC 13496)
GGCCTGAAGAAGGAAATCCCCGGAACCCCCGAGAATGTCGTCCCCGTGCA
CTTGCGCCCCAAGCAGCTCTACTCGGACTGGCCTGGTCGGCAATATTAAA
ATCAAGGACATCAACACCCACTGCCTGAAGTCGTTCACCGCTCACTGGGA
GTGCCTCGAGAACAACAACCACAAGCTCTGGGAGTGCCGTGCGCAGGAGA
TGAAGCTGAACAGCTGTGTTTTCGAGAAGCTGGTTTAACCAGCAGGTGCT
GGTCGACACGACCCCCATGCCCGATCACATCCCCAAGGTGGAGGAGATCG
GTGCTACGTCGGCGCCGCTGTACAGCGCGGCGTACTTTATCGGAGACCGC
TGCAAGCCCTACAACGACGACTTCATGAAGTGCAAGGACGAGTCGAACGG
GCGCGGAGAGCTGGACTGTCTGAAGGAGGGTAGAAAGGTGACGCGCTGTG
CGGCTAGCGTATGGCGTCCAGAGAGCCCCAGGCCTGAAGAAGGAAATCCC
CGGAACCCCCGAGAATGTCGTCCCCGTGCACTTGCGCCCCAAGCAGCTCT
ACTCGGACTGGCCTGGTCGGCAATATTAAAATCAAGGACATCAACACCCA
CTGCCTGAAGTCGTTCACCGCTCACTGGGAGTGCCTCGAGAACAACAACC
ACAAGCTCTGGGAGTGCCGTGCGCAGGAGATGAAGCTGAACAGCTGTGTT
TTCGAGAAGCTGGTTTAACCAGCAGGTGCTGGTCGACACGACCCCCATGC
CCGATCACATCCCCAAGGTGGAGGAGATCGGTGCTACGTCGGCGCCGCTG
TACAGCGCGGCGTACTTTATCGGAGACCGCTGCAAGCCCTACAACGACGA
CTTCATGAAGTGCAAGGACGAGTCGAACGGGCGCGGAGAGCTGGACTGTC
TGAAGGAGGGTAGAAAGGTGACGCGCTGTGCGGCTAGCGTATGGCGTCCA
GAGAGCCCCAGGCCTGAAGAAGGAAATCCCCGGAACCCCCGAGAATGTCG
TCCCCGTGCACTTGCGCCCCAAGCAGCTCTACTCGGACTGGCCTGGTCGG
CAATATTAAAATCAAGGACATCAACACCCACTGCCTGAAGTCGTTCACCG
CTCACTGGGAGTGCCTCGAGAACAACAACCACAAGCTCTGGGAGTGCCGT
GCGCAGGAGATGAAGCTGAACAGCTGTGTTTTCGAGAAGCTGGTTTAACC
AGCAGGTGCTGGTCGACACGACCCCCATGCCCGATCACATCCCCAAGGTG
GAGGAGATCGGTGCTACGTCGGCGCCGCTGTACAGCGCGGCGTACTTTAT
CGGAGACCGCTGCAAGCCCTACAACGACGACTTCATGAAGTGCAAGGACG
AGTCGAACGGGCGCGGAGAGCTGGACTGTCTGAAGGAGGGTAGAAAGGTG
ACGCGCTGTGCGGCTAGCGTATGGCGTCCAGAGAGCCCCAGGCCTGAAGA
AGGAAATCCCCGGAACCCCCGAGAATGTCGTCCCCGTGCACTTGCGCCCC
AAGCAGCTCTACTCGGACTGGCCTGGTCGGCAATATTAAAATCAAGGACA
TCAACACCCACTGCCTGAAGTCGTTCACCGCTCACTGGGAGTGCCTCGAG
AACAACAACCACAAGCTCTGGGAGTGCCGTGCGCAGGAGATGAAGCTGAA
CAGCTGTGTTTTCGAGAAGCTGGTTTAACCAGCAGGTGCTGGTCGACACG
ACCCCCATGCCCGATCACATCCCCAAGGTGGAGGAGATCGGTGCTACGTC
GGCGCCGCTGTACAGCGCGGCGTACTTTATCGGAGACCGCTGCAAGCCCT
ACAACGACGACTTCATGAAGTGCAAGGACGAGTCGAACGGGCGCGGAGAG
CTGGACTGTCTGAAGGAGGGTAGAAAGGTGACGCGCTGTGCGGCTAGCGT
ATGGCGTCCAGAGAGCCCCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005747mitochondrial respiratory chain complex I
Vocabulary: Biological Process
TermDefinition
GO:0006120mitochondrial electron transport, NADH to ubiquinone
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_296725M747DRAFT_296725Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296725-T1M747DRAFT_296725-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296725-T1.cdsM747DRAFT_296725-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296725-T1.utr3p1M747DRAFT_296725-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296725-T1.exon4M747DRAFT_296725-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_296725-T1.exon3M747DRAFT_296725-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_296725-T1.exon2M747DRAFT_296725-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_296725-T1.exon1M747DRAFT_296725-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296725-T1.utr5p1M747DRAFT_296725-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR010625
DBxrefInterPro:IPR016680
DBxrefPFAM:PF06747
Product subunit 8
Product alpha subcomplex
ProductNADH dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851920.1supercontigKZ851920.1:352183..353287 -
Powered by Drupal