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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851922.1:219090..220243- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_296985-T1 ID=M747DRAFT_296985-T1|Name=M747DRAFT_296985-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1154bp|location=Sequence derived from alignment at KZ851922.1:219090..220243- (Aspergillus niger ATCC 13496)
TTTTCTACTCCTACACTCGATCTTACCGACGTCGTCGACACATCCCTCGA
GGTATGTATCAATCGTTATTTCGCCCTATTCTACAGCCTCCCAGCTAGTC
TGAGGAAGCAATCACCATGGAAATCCGCATATTCGGCCTTGCTGGTGTAG
TATCCGACAGCAGAGGATAATCGGAGGACCGGGTGATACGCTTTCCTCAC
TACGGCACGGGCTGAAGAACCCTTGTTTATGCAAAAGGGGCACTCTTTGC
GCTCGAGGACTACTGGTGGCTGACTATTATGGACCCAATTCCTCATCGGT
GGTGTGAGGACTGGGCATCGTAAATTTTAGATACCTCATATCCTTCGATT
CCTCGATTTGAGAATCTCGATTCCACACCGTCAAAATGGTCAAGACTTCC
GTCCTCAACGATGCGCTTAACGCCATCAACAACGCCGAGAAGAGCGGTCG
CCGTCAGGTCCTGATCCGCCCTTCCTCCAAGGTCATCATCAAGTTCCTTT
CCGTCATGCAGAAGCACGGTACGTTCATGTCTACAACATCACCAACATCG
TGAAACAAGGAGTTCCGGGCACTTGCAAGGTCGAGCCGCCAAGGAGGTGA
TGAAAAATTCGGGTTGATAACTAGGCGACGGTTATAGACCAACCACGGCT
TTCGCCCTTTAAGTGCCCGAGATATTGACAAGTGTTGTTTACAACATGGC
GGCGATCTTACAAGTTTCCGGAACTCTTTATTTCTTCTGTGTTTGGTTAA
CTTTTAAATCACCGCAACAAATTGCTGACTCTTTTTTCCTTCTTCAGGCT
ACATTGGCGAGTTCGAGGAGGTTGACGACCACCGCTCCGGCAAGATCGTC
ATCCAGCTCAACGGCCGTCTGAACAAGTGCGGTGTCATCAACCCCCGCTA
CCCCGTTCAGCTCCGTGACCTCGAGAAGTGGGCCACTCAGCTCCTGCCCT
CCCGTCAGTTCGGTTACGTTGTCCTGACCACCTCCGCTGGTATCATGGAC
CACGAGGAGGCTCGCCGCAAGCACGTTGCCGGCAAGCTCCTCGGTTTCTT
CTACTAAAAAGTTTACCCTGGAAGCTTTTTTTTGATGGCGAGGATCTAGT
TTGTGGTGCGAGGGATGAACTCTCGTGGCTTGGCGGAGTTGGATCGATAC
CCGG back to topCoding sequence (CDS) from alignment at KZ851922.1:219090..220243- >M747DRAFT_296985-T1 ID=M747DRAFT_296985-T1|Name=M747DRAFT_296985-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=786bp|location=Sequence derived from alignment at KZ851922.1:219090..220243- (Aspergillus niger ATCC 13496)
GCTACATTGGCGAGTTCGAGGAGGTTGACGACCACCGCTCCGGCAAGATC
GTCATCCAGCTCAACGGCCGTCTGAACAAGTGCGGTGTCATCAACCCCCG
CTACCCCGTTCAGCTCCGTGACCTCGAGAAGTGGGCCACTCAGCTCCTGC
CCTCCCGTCAGTTCGGTTACGTTGTCCTGACCACCTCCGCTGGTATCATG
GACCACGAGGAGGCTCGCCGCAAGCACGTTGCCGGCAAGCTCCTCGGTTT
CTTCTACTAAATGGTCAAGACTTCCGTCCTCAACGATGCGCTTAACGCCA
TCAACAACGCCGAGAAGAGCGGTCGCCGTCAGGTCCTGATCCGCCCTTCC
TCCAAGGTCATCATCAAGTTCCTTTCCGTCATGCAGAAGCACGGCTACAT
TGGCGAGTTCGAGGAGGTTGACGACCACCGCTCCGGCAAGATCGTCATCC
AGCTCAACGGCCGTCTGAACAAGTGCGGTGTCATCAACCCCCGCTACCCC
GTTCAGCTCCGTGACCTCGAGAAGTGGGCCACTCAGCTCCTGCCCTCCCG
TCAGTTCGGTTACGTTGTCCTGACCACCTCCGCTGGTATCATGGACCACG
AGGAGGCTCGCCGCAAGCACGTTGCCGGCAAGCTCCTCGGTTTCTTCTAC
TAAATGGTCAAGACTTCCGTCCTCAACGATGCGCTTAACGCCATCAACAA
CGCCGAGAAGAGCGGTCGCCGTCAGGTCCTGATCCGCCCTTCCTCCAAGG
TCATCATCAAGTTCCTTTCCGTCATGCAGAAGCACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035987 |
| DBxref | InterPro:IPR000630 |
| DBxref | PFAM:PF00410 |
| Product | 40S ribosomal protein S22 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851922.1 | supercontig | KZ851922.1:219090..220243 - |
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