You are here

Home

M747DRAFT_297082-T1, M747DRAFT_297082-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297082-T1
Unique NameM747DRAFT_297082-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851922.1:554962..556512-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297082-T1 ID=M747DRAFT_297082-T1|Name=M747DRAFT_297082-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1551bp|location=Sequence derived from alignment at KZ851922.1:554962..556512- (Aspergillus niger ATCC 13496)
ACCTCATCTCCTGAACTGCCCAACCGCTGCTCTGTTCTGGCACTGTTCAT
GCCAGTATATTAGCTAGGAGTACTTCTTTGATAAACATTGTCCGCCTTAC
GCCTGATCGATCCTTCAGGTTTTTCAACTCCTCTTGCGTGTTACCTCGCA
CCTTTGTTTATCTTTGCAAAACAAACCCCACAACCACTGCTGGATATCCA
GCCAGACTTGCATTTTGAAGCATCTGCCGGAAGTTTATTGAACTACAACA
TTAGACAATATGACGCTTTACTACAGCCTCGTACGTACCGCCATTTGTTG
TTGACTCTCCTCGCAATGGCATGGAGTTCGGGATTGTTGCAGCCTGCCGC
CTGCAGCCCCTGACCCGCGCACTCCCGGATCATCAGATAATATGTCGCAT
CAGCATGTGCTTACAATATGGTAATAGGTTTTCTGCCTCTTGGTGTTTGA
GATGGCGGTCTTCATGGGCCTCATCATCCCTCTTCCATTCACCGTGAAGA
GGAAGCTCTTCGCTTTCATTTCGGAAAGTCCGATAGTAGCTAAATTACAA
TATGGATTAAAGGTATGCTATTAAACATTGTCTAACATTTGCAATCACTC
ATCAAGCTATAGATCACATTCATCTTTATCCTCATCCTCTTCATCGATAG
TGTCAACCGCGTATACCGTGTGCAGCTGGAGCTGGCTTCCTTCGGCAAAG
AGGGAGGCACCATGGGGTATGCTTCCGACGATCCAGGCCCTTTTTAGCAT
TGCACTGAAACAGTTACTGACCTAGCTTTCGCCACAGAGCCGCCGCTCTC
GGTACCGATCGCATGGAAGTCCAAGCCCGGAAGTTCTACTCGCAGCGCAA
CATGTACCTCTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCGCA
CTTACACCATGATCCTTGACGTCCTCCGTCTTGAGGACAGAGTCAGACTC
CTTGAGGGTGACAAGAAGGCTGGCGGTAAGGACTCCGCTCGTCTTGCGCA
GGCCGGTGAAATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGCCA
AGGACCGTGACATTGAGACCCTGAAGAAGCAGTGTGAGGGTCTCACCCGC
GAATATCACAAGCTTGGTGATCAGGTGTCTGGTGAGAAGGATGAGGCTCC
CAAGAAGGACCAGTAGACGTCTCTTGGGTGTGCCGCGAGAAATACAATCG
TGAGCTTGTTAGGCCAGTCGGGACTGTGAATTGATCGCTCTTTGGGGCTG
ATTGATTGTACATCACGCCGTCTGCAAGCTACTCTCTTATGTGCATTTCG
GTTACCATATCTATCGGGTCTGGATGAGGCGGAATGTTGACAACAACCGC
CTGTTGGTCGGATGAACCAGCTGTTATCTTGAAGCGCATTGGTGGAGTGG
ATCATACTGGTGCAGTTTTCGGGAAAGAAGTTGTCATTGCAAAACTTAGG
ATTATCTGGGTCATCTGGGTTATCACTTACAATGGAGCAAAAATACCATC
GTCTAAATCAAAATGTAGGCATTCGGTAAACACAAGAGCGATACATCCAC
A
back to top

Coding sequence (CDS) from alignment at KZ851922.1:554962..556512-

>M747DRAFT_297082-T1 ID=M747DRAFT_297082-T1|Name=M747DRAFT_297082-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2556bp|location=Sequence derived from alignment at KZ851922.1:554962..556512- (Aspergillus niger ATCC 13496)
AGCCGCCGCTCTCGGTACCGATCGCATGGAAGTCCAAGCCCGGAAGTTCT
ACTCGCAGCGCAACATGTACCTCTGTGGATTCACCCTCTTCCTGTCTCTT
ATCCTCAATCGCACTTACACCATGATCCTTGACGTCCTCCGTCTTGAGGA
CAGAGTCAGACTCCTTGAGGGTGACAAGAAGGCTGGCGGTAAGGACTCCG
CTCGTCTTGCGCAGGCCGGTGAAATCGGTGAAATCGGCCGTCTGAAGGAG
GAGCTTGCAGCCAAGGACCGTGACATTGAGACCCTGAAGAAGCAGTGTGA
GGGTCTCACCCGCGAATATCACAAGCTTGGTGATCAGGTGTCTGGTGAGA
AGGATGAGGCTCCCAAGAAGGACCAGTAGATCACATTCATCTTTATCCTC
ATCCTCTTCATCGATAGTGTCAACCGCGTATACCGTGTGCAGCTGGAGCT
GGCTTCCTTCGGCAAAGAGGGAGGCACCATGGGGTTTTCTGCCTCTTGGT
GTTTGAGATGGCGGTCTTCATGGGCCTCATCATCCCTCTTCCATTCACCG
TGAAGAGGAAGCTCTTCGCTTTCATTTCGGAAAGTCCGATAGTAGCTAAA
TTACAATATGGATTAAAGATGACGCTTTACTACAGCCTCAGCCGCCGCTC
TCGGTACCGATCGCATGGAAGTCCAAGCCCGGAAGTTCTACTCGCAGCGC
AACATGTACCTCTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCG
CACTTACACCATGATCCTTGACGTCCTCCGTCTTGAGGACAGAGTCAGAC
TCCTTGAGGGTGACAAGAAGGCTGGCGGTAAGGACTCCGCTCGTCTTGCG
CAGGCCGGTGAAATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGC
CAAGGACCGTGACATTGAGACCCTGAAGAAGCAGTGTGAGGGTCTCACCC
GCGAATATCACAAGCTTGGTGATCAGGTGTCTGGTGAGAAGGATGAGGCT
CCCAAGAAGGACCAGTAGATCACATTCATCTTTATCCTCATCCTCTTCAT
CGATAGTGTCAACCGCGTATACCGTGTGCAGCTGGAGCTGGCTTCCTTCG
GCAAAGAGGGAGGCACCATGGGGTTTTCTGCCTCTTGGTGTTTGAGATGG
CGGTCTTCATGGGCCTCATCATCCCTCTTCCATTCACCGTGAAGAGGAAG
CTCTTCGCTTTCATTTCGGAAAGTCCGATAGTAGCTAAATTACAATATGG
ATTAAAGATGACGCTTTACTACAGCCTCAGCCGCCGCTCTCGGTACCGAT
CGCATGGAAGTCCAAGCCCGGAAGTTCTACTCGCAGCGCAACATGTACCT
CTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCGCACTTACACCA
TGATCCTTGACGTCCTCCGTCTTGAGGACAGAGTCAGACTCCTTGAGGGT
GACAAGAAGGCTGGCGGTAAGGACTCCGCTCGTCTTGCGCAGGCCGGTGA
AATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGCCAAGGACCGTG
ACATTGAGACCCTGAAGAAGCAGTGTGAGGGTCTCACCCGCGAATATCAC
AAGCTTGGTGATCAGGTGTCTGGTGAGAAGGATGAGGCTCCCAAGAAGGA
CCAGTAGATCACATTCATCTTTATCCTCATCCTCTTCATCGATAGTGTCA
ACCGCGTATACCGTGTGCAGCTGGAGCTGGCTTCCTTCGGCAAAGAGGGA
GGCACCATGGGGTTTTCTGCCTCTTGGTGTTTGAGATGGCGGTCTTCATG
GGCCTCATCATCCCTCTTCCATTCACCGTGAAGAGGAAGCTCTTCGCTTT
CATTTCGGAAAGTCCGATAGTAGCTAAATTACAATATGGATTAAAGATGA
CGCTTTACTACAGCCTCAGCCGCCGCTCTCGGTACCGATCGCATGGAAGT
CCAAGCCCGGAAGTTCTACTCGCAGCGCAACATGTACCTCTGTGGATTCA
CCCTCTTCCTGTCTCTTATCCTCAATCGCACTTACACCATGATCCTTGAC
GTCCTCCGTCTTGAGGACAGAGTCAGACTCCTTGAGGGTGACAAGAAGGC
TGGCGGTAAGGACTCCGCTCGTCTTGCGCAGGCCGGTGAAATCGGTGAAA
TCGGCCGTCTGAAGGAGGAGCTTGCAGCCAAGGACCGTGACATTGAGACC
CTGAAGAAGCAGTGTGAGGGTCTCACCCGCGAATATCACAAGCTTGGTGA
TCAGGTGTCTGGTGAGAAGGATGAGGCTCCCAAGAAGGACCAGTAGATCA
CATTCATCTTTATCCTCATCCTCTTCATCGATAGTGTCAACCGCGTATAC
CGTGTGCAGCTGGAGCTGGCTTCCTTCGGCAAAGAGGGAGGCACCATGGG
GTTTTCTGCCTCTTGGTGTTTGAGATGGCGGTCTTCATGGGCCTCATCAT
CCCTCTTCCATTCACCGTGAAGAGGAAGCTCTTCGCTTTCATTTCGGAAA
GTCCGATAGTAGCTAAATTACAATATGGATTAAAGATGACGCTTTACTAC
AGCCTC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_297082M747DRAFT_297082Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297082-T1M747DRAFT_297082-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297082-T1.cdsM747DRAFT_297082-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297082-T1.utr3p1M747DRAFT_297082-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297082-T1.exon4M747DRAFT_297082-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_297082-T1.exon3M747DRAFT_297082-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_297082-T1.exon2M747DRAFT_297082-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297082-T1.exon1M747DRAFT_297082-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297082-T1.utr5p1M747DRAFT_297082-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264XKX
DBxrefInterPro:IPR040463
DBxrefInterPro:IPR041672
DBxrefPFAM:PF18035
DBxrefPFAM:PF05529
ProductBAP31 domain protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851922.1supercontigKZ851922.1:554962..556512 -
Powered by Drupal