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M747DRAFT_297095-T1, M747DRAFT_297095-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297095-T1
Unique NameM747DRAFT_297095-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851923.1:5120..6375-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297095-T1 ID=M747DRAFT_297095-T1|Name=M747DRAFT_297095-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1256bp|location=Sequence derived from alignment at KZ851923.1:5120..6375- (Aspergillus niger ATCC 13496)
CCGCTCCCGATCCTTCATCTTTCATCCAACCAACGATGTTCTAAACCACC
TCTCACTCATTCTAGTATGGGAATACCCATGGGTTCCAACATTCATGCTC
CAACAGTAGCCTCCGGCCCTACGTCCGGAGGGGCTCCTCCTCGCGATCTG
TCCAAGCTCGGCATGGTCGATCTCATGCAAGAAAAGGAACGCATCGAAGA
AGAACTCTCGGCTCTGAGTAGCTTCCTTGGCTCGGTGAGTTGAACTGATA
TTGGATAAGCCTTGCCACTCTGTGAGATGTCGACTGACGATGCTTTCTGT
CTAGCATGGCGTTAATATGAACACATCTCTCACTACTTTCGATGGCTTCC
CACGAGACGATATCGATGTTGCCCAAAGTGAGTCACTACTTTTTGCCTCC
GCAGTGCGTCTGCTAAACAGTAGTTAGTACGCACCACTCGAGCCCGGATT
ATTCGACTGCGGAATGACCATAAAGACGTGATGTCACATCTGGAGAAAGG
AATTCACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGCACAGT
CGGGTGGCTTGGGGTCGCAACCTAGTGTGACTGGGAATAATACCTCCGGC
ACTGGGGCATCTGGGTTACCCTTCGCAAAGGTCAATAGTGTGGTGCCTGG
AAGTCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATACCGTTCGGGAGT
TCGGAAGTGCCAACTGGCTCAACCATGAACGTCTCTCCAGGGTGGCGGAG
ATAGTGCAGCAGAGTGAAGGGGTAAGTAGGCGATGTGCTTCCAACCTCTT
AGTCGTCTAGTCCAGGGACATGCACTCGGGAGAACGCTCTAGGCTAACGT
CTTCTAGCGCACTGTGGCGGTCAAAGTCGTGAGGAAAGATCCGAGTTCTT
CCAGCAGCATCGACTTGTCCCTGCAGCTTGTCCCTCGCCGTGATTGGGGC
GGTCGGGGCCTGTTGGGCTGTCATCTCGTGCCGCTGTAGTGGACTGGCAT
CGGGTTAGGCACGAGGATGACGGCCGTTTACTGTACTCTGGGATAGTCCC
TAGAATACTAGGACTTAGCCGGGTACGATCTACTTTCGTTTATGATTTCT
CCCTTTTGCTTGCTATTGGACTTTATGAGGAATGTGACATGTATTCATGA
TCGAACGCGACGTGTTTATTCTTGCAGGGAAATACCTAGGGAAGCATTCA
GGGTGGCGTTTCAGTTTAGGTTCAAGAGATGAAATTGCACCTGTTTATAT
GGACAT
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Coding sequence (CDS) from alignment at KZ851923.1:5120..6375-

>M747DRAFT_297095-T1 ID=M747DRAFT_297095-T1|Name=M747DRAFT_297095-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2868bp|location=Sequence derived from alignment at KZ851923.1:5120..6375- (Aspergillus niger ATCC 13496)
CGCACTGTGGCGGTCAAAGTCGTGAGGAAAGATCCGAGTTCTTCCAGCAG
CATCGACTTGTCCCTGCAGCTTGTCCCTCGCCGTGATTGGGGCGGTCGGG
GCCTGTTGGGCTGTCATCTCGTGCCGCTGTAGTACGCACCACTCGAGCCC
GGATTATTCGACTGCGGAATGACCATAAAGACGTGATGTCACATCTGGAG
AAAGGAATTCACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGC
ACAGTCGGGTGGCTTGGGGTCGCAACCTAGTGTGACTGGGAATAATACCT
CCGGCACTGGGGCATCTGGGTTACCCTTCGCAAAGGTCAATAGTGTGGTG
CCTGGAAGTCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATACCGTTCG
GGAGTTCGGAAGTGCCAACTGGCTCAACCATGAACGTCTCTCCAGGGTGG
CGGAGATAGTGCAGCAGAGTGAAGGGCATGGCGTTAATATGAACACATCT
CTCACTACTTTCGATGGCTTCCCACGAGACGATATCGATGTTGCCCAAAA
TGGGAATACCCATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGC
CCTACGTCCGGAGGGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGT
CGATCTCATGCAAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGA
GTAGCTTCCTTGGCTCGCGCACTGTGGCGGTCAAAGTCGTGAGGAAAGAT
CCGAGTTCTTCCAGCAGCATCGACTTGTCCCTGCAGCTTGTCCCTCGCCG
TGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCATCTCGTGCCGCTGTAGT
ACGCACCACTCGAGCCCGGATTATTCGACTGCGGAATGACCATAAAGACG
TGATGTCACATCTGGAGAAAGGAATTCACAACCACTTTGCCAATCTGCAG
CGGGCGCAAACTGCCGCACAGTCGGGTGGCTTGGGGTCGCAACCTAGTGT
GACTGGGAATAATACCTCCGGCACTGGGGCATCTGGGTTACCCTTCGCAA
AGGTCAATAGTGTGGTGCCTGGAAGTCCCGCAGACCAGGCAGGTCTAAGG
GTTGGAGATACCGTTCGGGAGTTCGGAAGTGCCAACTGGCTCAACCATGA
ACGTCTCTCCAGGGTGGCGGAGATAGTGCAGCAGAGTGAAGGGCATGGCG
TTAATATGAACACATCTCTCACTACTTTCGATGGCTTCCCACGAGACGAT
ATCGATGTTGCCCAAAATGGGAATACCCATGGGTTCCAACATTCATGCTC
CAACAGTAGCCTCCGGCCCTACGTCCGGAGGGGCTCCTCCTCGCGATCTG
TCCAAGCTCGGCATGGTCGATCTCATGCAAGAAAAGGAACGCATCGAAGA
AGAACTCTCGGCTCTGAGTAGCTTCCTTGGCTCGCGCACTGTGGCGGTCA
AAGTCGTGAGGAAAGATCCGAGTTCTTCCAGCAGCATCGACTTGTCCCTG
CAGCTTGTCCCTCGCCGTGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCA
TCTCGTGCCGCTGTAGTACGCACCACTCGAGCCCGGATTATTCGACTGCG
GAATGACCATAAAGACGTGATGTCACATCTGGAGAAAGGAATTCACAACC
ACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGCACAGTCGGGTGGCTTG
GGGTCGCAACCTAGTGTGACTGGGAATAATACCTCCGGCACTGGGGCATC
TGGGTTACCCTTCGCAAAGGTCAATAGTGTGGTGCCTGGAAGTCCCGCAG
ACCAGGCAGGTCTAAGGGTTGGAGATACCGTTCGGGAGTTCGGAAGTGCC
AACTGGCTCAACCATGAACGTCTCTCCAGGGTGGCGGAGATAGTGCAGCA
GAGTGAAGGGCATGGCGTTAATATGAACACATCTCTCACTACTTTCGATG
GCTTCCCACGAGACGATATCGATGTTGCCCAAAATGGGAATACCCATGGG
TTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGGAGGGG
CTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCTCATGCAAGAA
AAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCTTCCTTGGCTC
GCGCACTGTGGCGGTCAAAGTCGTGAGGAAAGATCCGAGTTCTTCCAGCA
GCATCGACTTGTCCCTGCAGCTTGTCCCTCGCCGTGATTGGGGCGGTCGG
GGCCTGTTGGGCTGTCATCTCGTGCCGCTGTAGTACGCACCACTCGAGCC
CGGATTATTCGACTGCGGAATGACCATAAAGACGTGATGTCACATCTGGA
GAAAGGAATTCACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCG
CACAGTCGGGTGGCTTGGGGTCGCAACCTAGTGTGACTGGGAATAATACC
TCCGGCACTGGGGCATCTGGGTTACCCTTCGCAAAGGTCAATAGTGTGGT
GCCTGGAAGTCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATACCGTTC
GGGAGTTCGGAAGTGCCAACTGGCTCAACCATGAACGTCTCTCCAGGGTG
GCGGAGATAGTGCAGCAGAGTGAAGGGCATGGCGTTAATATGAACACATC
TCTCACTACTTTCGATGGCTTCCCACGAGACGATATCGATGTTGCCCAAA
ATGGGAATACCCATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGG
CCCTACGTCCGGAGGGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCATGG
TCGATCTCATGCAAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTG
AGTAGCTTCCTTGGCTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_297095M747DRAFT_297095Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297095-T1M747DRAFT_297095-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297095-T1.cdsM747DRAFT_297095-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297095-T1.utr3p1M747DRAFT_297095-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297095-T1.exon4M747DRAFT_297095-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_297095-T1.exon3M747DRAFT_297095-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_297095-T1.exon2M747DRAFT_297095-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297095-T1.exon1M747DRAFT_297095-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297095-T1.utr5p1M747DRAFT_297095-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036034
DBxrefInterPro:IPR040815
DBxrefInterPro:IPR041489
DBxrefInterPro:IPR001478
DBxrefPFAM:PF17820
DBxrefPFAM:PF13180
DBxrefPFAM:PF00595
DBxrefPFAM:PF18265
Product26S proteasome non-ATPase regulatory subunit 9
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851923.1supercontigKZ851923.1:5120..6375 -
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