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M747DRAFT_297162-T1, M747DRAFT_297162-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297162-T1
Unique NameM747DRAFT_297162-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851923.1:409162..410558-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297162-T1 ID=M747DRAFT_297162-T1|Name=M747DRAFT_297162-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1397bp|location=Sequence derived from alignment at KZ851923.1:409162..410558- (Aspergillus niger ATCC 13496)
CTCCTGAATCGCATTACAAGAGGTACCCAGGTTGTGGTTCGAATTTTAGG
GATTATTATCTTCTCCAGTGGCCTTCTTCGACTATCAAGTTTGCCCTGCC
AATTGAGTCCGCATACCTCAAACAACCTGTTGGTCCTAGCTCTATCCTTG
CCCATCGGACCGGTTTCGTGACAGCCTGAACGGAGCAAAATGAACGTCGA
GTTCCAAGGGACCCTCTCCAACCTGGAGAATAAACTAAATGTGCTCATAA
ATAGCCTGACAACATCACCAACAGCTGCAGGCGCCCCCGCCGCTGCGATC
GGTTTATTGGACGCCGACGACTCGCTGACCTCCGCCGTCGAGACTCTCCG
ACAACATCAGCAGAACTACGCCAAGATCTTACGGCTCCGTGAAGAGGCTC
AGGAACTGGAAGATAAAGTCAAAAGCATTGTACGTGAGGTGATGGCCTAC
GAAAAGGAAATCATAACCACTTGTGGAGACGAGTCCGATAGCGATCTGGA
CTCCGAGGATGATTACTCGGATTACGACTCGGACGAAAACATGGACGGTG
AAAAGCCTAGGTCTACTGGGTTACGGGGGATCAAGGAGGTGGACTACAAA
CTGCTTCTGGACTTTGCGCGGCGGATCAGCAAATACAATCACCAAGCGGC
TGCCGATGCTGCAGCGACTGCAGAGGCCAAATCACGAGAGAGGTTGCAAG
AAACCAAGGGACCAGACACAGAAATGACGGGGACAAATGGCAACCAGGAT
ACGGAGGCAGCGGAACCGGTCGCATCTGTGACTAAAGACGCGACTAGTTG
GCTTGACGAATCGGCGAAGATGACTCGCCAGGCTTATATGCTACCGTATC
CAATGGAAGACCGCATTCGAATGGGGCTTATGGCGCAAATACAGCTTGCT
GCTGCCGAGGGCCGCCCGGGATTTGAACCCGAGAAGGAAGTTGAACGTTT
GATACGCGAGGCCGAGGGTGTAGGGATCGCGGATGCGATGCCGCAGGTCG
ACGTCGGCGAAGAAGCGCGTCATGCAGATGAGGCCGCAAAAGCAGCAGCG
CATGCTGGATCCGCAGCAACAAGCGGATCTGGAATGGGAGCCGCGTCATT
GCCAAAACCTAAGGCTACATTGGACTTGGATCTGTACGACCCGGATGAAG
ACGACGAATGATGCGATAGTGCTTACTGTAAACATAATGCAATACTTGAG
ACGACCAGCCAACAGCAGGCCTGTTGCTTCTGGGCATTCAAACGAGAAGA
ATTAATATCGGCTGCTAATTCACATCTTGTGTACTGACGACTTTGCTGTC
CACTTCCTGAAACGCTTTCCATACAAGTAGAAGGGAATCGCGAAGAGACA
CCACAGGACTGCAAGCGACATGTTCAACATTATTGGTTTCACGAAGC
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Coding sequence (CDS) from alignment at KZ851923.1:409162..410558-

>M747DRAFT_297162-T1 ID=M747DRAFT_297162-T1|Name=M747DRAFT_297162-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=972bp|location=Sequence derived from alignment at KZ851923.1:409162..410558- (Aspergillus niger ATCC 13496)
ATGAACGTCGAGTTCCAAGGGACCCTCTCCAACCTGGAGAATAAACTAAA
TGTGCTCATAAATAGCCTGACAACATCACCAACAGCTGCAGGCGCCCCCG
CCGCTGCGATCGGTTTATTGGACGCCGACGACTCGCTGACCTCCGCCGTC
GAGACTCTCCGACAACATCAGCAGAACTACGCCAAGATCTTACGGCTCCG
TGAAGAGGCTCAGGAACTGGAAGATAAAGTCAAAAGCATTGTACGTGAGG
TGATGGCCTACGAAAAGGAAATCATAACCACTTGTGGAGACGAGTCCGAT
AGCGATCTGGACTCCGAGGATGATTACTCGGATTACGACTCGGACGAAAA
CATGGACGGTGAAAAGCCTAGGTCTACTGGGTTACGGGGGATCAAGGAGG
TGGACTACAAACTGCTTCTGGACTTTGCGCGGCGGATCAGCAAATACAAT
CACCAAGCGGCTGCCGATGCTGCAGCGACTGCAGAGGCCAAATCACGAGA
GAGGTTGCAAGAAACCAAGGGACCAGACACAGAAATGACGGGGACAAATG
GCAACCAGGATACGGAGGCAGCGGAACCGGTCGCATCTGTGACTAAAGAC
GCGACTAGTTGGCTTGACGAATCGGCGAAGATGACTCGCCAGGCTTATAT
GCTACCGTATCCAATGGAAGACCGCATTCGAATGGGGCTTATGGCGCAAA
TACAGCTTGCTGCTGCCGAGGGCCGCCCGGGATTTGAACCCGAGAAGGAA
GTTGAACGTTTGATACGCGAGGCCGAGGGTGTAGGGATCGCGGATGCGAT
GCCGCAGGTCGACGTCGGCGAAGAAGCGCGTCATGCAGATGAGGCCGCAA
AAGCAGCAGCGCATGCTGGATCCGCAGCAACAAGCGGATCTGGAATGGGA
GCCGCGTCATTGCCAAAACCTAAGGCTACATTGGACTTGGATCTGTACGA
CCCGGATGAAGACGACGAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_297162M747DRAFT_297162Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297162-T1.cdsM747DRAFT_297162-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297162-T1.utr3p1M747DRAFT_297162-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297162-T1.exon1M747DRAFT_297162-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297162-T1.utr5p1M747DRAFT_297162-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297162-T1M747DRAFT_297162-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR019258
DBxrefPFAM:PF10018
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851923.1supercontigKZ851923.1:409162..410558 -
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