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M747DRAFT_297356-T1, M747DRAFT_297356-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297356-T1
Unique NameM747DRAFT_297356-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851925.1:227015..228198+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297356-T1 ID=M747DRAFT_297356-T1|Name=M747DRAFT_297356-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1184bp|location=Sequence derived from alignment at KZ851925.1:227015..228198+ (Aspergillus niger ATCC 13496)
CTCTAAGGATAACCCGCACTACATTTTCCTGCAGCTCGCAATGCCGGTAC
TATCCCATTTTCTATCTTCCTCTCCATGAAACTCTCCAGACAAATTGACT
AATCCCATTCTAGGCATACCACTCCATCTTCCTCGAGGATCGGGATGTCC
CCGTAATAGGTACGCCGCACTCTCCCCGCCATACACTTACCTAGCTACAC
CCCATACATCGAGAGCTACCTCCACCATACACTCCAGCCCACCTCCGTAT
CAGCAGTCCAACTAATATCCATTGATAGGAAACTTCCCCATCCTCCCCCT
CCGCACACGCACCCGCGGCCCCGCATACACCCTCCCCCCGCTCCCGCCCA
CCGCCGACACCACCGATGTGCCCGCCGACAGCGAATCCTACGACTGCGTC
GACGAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCCGTAACTTCGA
AATCAATGGCCCCGCCGATCGCATGCTCATCTACGGTACCTTGTTCATCA
GCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCGGGAGGCTGAG
AAGGTATGCTTTGCTTGCCCTTGTCGTGCTGAGTTGTGAGGGGTTGGTGG
TGGCTGTTCGATGTTAGGTGTTGCTTAATGAGGTGAGCGTGCTAATGGGT
ACTGTTGCAGGCATTGATCAACGTTGCGCTCGACCACTTCGCTATTCCCG
GTGACGTGTCCTTCCCTTTGAACCAGGCGTTTGAGGCGCCCCGCGATCGT
CAGGATGCGGAGACGTTGAGACAGTACGTTTATTCTTTTTCGGCCCTCTT
CGACTGAGGTCTGTGTTGGAGAGTGCTGATTTGGCTGTAATAGGTACCTT
TCGCAAGTTAGGCAGGAGATCGCGGTTCGGTTGCATGCTAGATTATACCC
CGGTGGTGAAGGGCCTTCGAAGGTATGTATTTCTTTCTTTCTACCCTGCA
ATTACAGATGGGAGGCTAATTAGGGTGTAGTGGTGGCTTAGTTTCGCCAA
GAGAAAGTTCATGGGAAAGAGCTTCTAGGATGATTGATTGATTGATTGAT
TGATAGATAGATGGATGTGCTTTTGTCTGCTGCCACAACTCAGCGTATGA
ACAAACTCGAAACTGGACCTTTAGTTGTTGTCCGTGTCTAGTCACTTTTA
CTCTGTGTATATTTCAACTTTAAGCGTTTTGATC
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Coding sequence (CDS) from alignment at KZ851925.1:227015..228198+

>M747DRAFT_297356-T1 ID=M747DRAFT_297356-T1|Name=M747DRAFT_297356-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3402bp|location=Sequence derived from alignment at KZ851925.1:227015..228198+ (Aspergillus niger ATCC 13496)
ATGCCGGCATACCACTCCATCTTCCTCGAGGATCGGGATGTCCCCGTAAT
AGGAAACTTCCCCATCCTCCCCCTCCGCACACGCACCCGCGGCCCCGCAT
ACACCCTCCCCCCGCTCCCGCCCACCGCCGACACCACCGATGTGCCCGCC
GACAGCGAATCCTACGACTGCGTCGACGAGATCCTCTCCCTCTTCCGCGC
CAATGTCCTCTTCCGTAACTTCGAAATCAATGGCCCCGCCGATCGCATGC
TCATCTACGGTACCTTGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCC
GGTATGGCTATGCGGGAGGCTGAGAAGGCATTGATCAACGTTGCGCTCGA
CCACTTCGCTATTCCCGGTGACGTGTCCTTCCCTTTGAACCAGGCGTTTG
AGGCGCCCCGCGATCGTCAGGATGCGGAGACGTTGAGACAGTACCTTTCG
CAAGTTAGGCAGGAGATCGCGGTTCGGTTGCATGCTAGATTATACCCCGG
TGGTGAAGGGCCTTCGAAGTGGTGGCTTAGTTTCGCCAAGAGAAAGTTCA
TGGGAAAGAGCTTCTAGATGCCGGCATACCACTCCATCTTCCTCGAGGAT
CGGGATGTCCCCGTAATAGGAAACTTCCCCATCCTCCCCCTCCGCACACG
CACCCGCGGCCCCGCATACACCCTCCCCCCGCTCCCGCCCACCGCCGACA
CCACCGATGTGCCCGCCGACAGCGAATCCTACGACTGCGTCGACGAGATC
CTCTCCCTCTTCCGCGCCAATGTCCTCTTCCGTAACTTCGAAATCAATGG
CCCCGCCGATCGCATGCTCATCTACGGTACCTTGTTCATCAGCGAGTGCT
TGGGGAAGGTTAAGCCCGGTATGGCTATGCGGGAGGCTGAGAAGGCATTG
ATCAACGTTGCGCTCGACCACTTCGCTATTCCCGGTGACGTGTCCTTCCC
TTTGAACCAGGCGTTTGAGGCGCCCCGCGATCGTCAGGATGCGGAGACGT
TGAGACAGTACCTTTCGCAAGTTAGGCAGGAGATCGCGGTTCGGTTGCAT
GCTAGATTATACCCCGGTGGTGAAGGGCCTTCGAAGTGGTGGCTTAGTTT
CGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGATGCCGGCATACCACT
CCATCTTCCTCGAGGATCGGGATGTCCCCGTAATAGGAAACTTCCCCATC
CTCCCCCTCCGCACACGCACCCGCGGCCCCGCATACACCCTCCCCCCGCT
CCCGCCCACCGCCGACACCACCGATGTGCCCGCCGACAGCGAATCCTACG
ACTGCGTCGACGAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCCGT
AACTTCGAAATCAATGGCCCCGCCGATCGCATGCTCATCTACGGTACCTT
GTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCGGG
AGGCTGAGAAGGCATTGATCAACGTTGCGCTCGACCACTTCGCTATTCCC
GGTGACGTGTCCTTCCCTTTGAACCAGGCGTTTGAGGCGCCCCGCGATCG
TCAGGATGCGGAGACGTTGAGACAGTACCTTTCGCAAGTTAGGCAGGAGA
TCGCGGTTCGGTTGCATGCTAGATTATACCCCGGTGGTGAAGGGCCTTCG
AAGTGGTGGCTTAGTTTCGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTA
GATGCCGGCATACCACTCCATCTTCCTCGAGGATCGGGATGTCCCCGTAA
TAGGAAACTTCCCCATCCTCCCCCTCCGCACACGCACCCGCGGCCCCGCA
TACACCCTCCCCCCGCTCCCGCCCACCGCCGACACCACCGATGTGCCCGC
CGACAGCGAATCCTACGACTGCGTCGACGAGATCCTCTCCCTCTTCCGCG
CCAATGTCCTCTTCCGTAACTTCGAAATCAATGGCCCCGCCGATCGCATG
CTCATCTACGGTACCTTGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCC
CGGTATGGCTATGCGGGAGGCTGAGAAGGCATTGATCAACGTTGCGCTCG
ACCACTTCGCTATTCCCGGTGACGTGTCCTTCCCTTTGAACCAGGCGTTT
GAGGCGCCCCGCGATCGTCAGGATGCGGAGACGTTGAGACAGTACCTTTC
GCAAGTTAGGCAGGAGATCGCGGTTCGGTTGCATGCTAGATTATACCCCG
GTGGTGAAGGGCCTTCGAAGTGGTGGCTTAGTTTCGCCAAGAGAAAGTTC
ATGGGAAAGAGCTTCTAGATGCCGGCATACCACTCCATCTTCCTCGAGGA
TCGGGATGTCCCCGTAATAGGAAACTTCCCCATCCTCCCCCTCCGCACAC
GCACCCGCGGCCCCGCATACACCCTCCCCCCGCTCCCGCCCACCGCCGAC
ACCACCGATGTGCCCGCCGACAGCGAATCCTACGACTGCGTCGACGAGAT
CCTCTCCCTCTTCCGCGCCAATGTCCTCTTCCGTAACTTCGAAATCAATG
GCCCCGCCGATCGCATGCTCATCTACGGTACCTTGTTCATCAGCGAGTGC
TTGGGGAAGGTTAAGCCCGGTATGGCTATGCGGGAGGCTGAGAAGGCATT
GATCAACGTTGCGCTCGACCACTTCGCTATTCCCGGTGACGTGTCCTTCC
CTTTGAACCAGGCGTTTGAGGCGCCCCGCGATCGTCAGGATGCGGAGACG
TTGAGACAGTACCTTTCGCAAGTTAGGCAGGAGATCGCGGTTCGGTTGCA
TGCTAGATTATACCCCGGTGGTGAAGGGCCTTCGAAGTGGTGGCTTAGTT
TCGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGATGCCGGCATACCAC
TCCATCTTCCTCGAGGATCGGGATGTCCCCGTAATAGGAAACTTCCCCAT
CCTCCCCCTCCGCACACGCACCCGCGGCCCCGCATACACCCTCCCCCCGC
TCCCGCCCACCGCCGACACCACCGATGTGCCCGCCGACAGCGAATCCTAC
GACTGCGTCGACGAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCCG
TAACTTCGAAATCAATGGCCCCGCCGATCGCATGCTCATCTACGGTACCT
TGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCGG
GAGGCTGAGAAGGCATTGATCAACGTTGCGCTCGACCACTTCGCTATTCC
CGGTGACGTGTCCTTCCCTTTGAACCAGGCGTTTGAGGCGCCCCGCGATC
GTCAGGATGCGGAGACGTTGAGACAGTACCTTTCGCAAGTTAGGCAGGAG
ATCGCGGTTCGGTTGCATGCTAGATTATACCCCGGTGGTGAAGGGCCTTC
GAAGTGGTGGCTTAGTTTCGCCAAGAGAAAGTTCATGGGAAAGAGCTTCT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005885Arp2/3 protein complex
GO:0005856cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030833regulation of actin filament polymerization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_297356M747DRAFT_297356Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297356-T1M747DRAFT_297356-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297356-T1.utr5p1M747DRAFT_297356-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297356-T1.exon1M747DRAFT_297356-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_297356-T1.exon2M747DRAFT_297356-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297356-T1.exon3M747DRAFT_297356-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_297356-T1.exon4M747DRAFT_297356-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_297356-T1.exon5M747DRAFT_297356-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_297356-T1.exon6M747DRAFT_297356-T1.exon6Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297356-T1.cdsM747DRAFT_297356-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297356-T1.utr3p1M747DRAFT_297356-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264S3E
DBxrefInterPro:IPR036753
DBxrefInterPro:IPR007204
DBxrefPFAM:PF04062
Product 21 kDa p21-Arc subunit
ProductARP2/3 complex
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851925.1supercontigKZ851925.1:227015..228198 +
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