You are here

Home

M747DRAFT_297364-T1, M747DRAFT_297364-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297364-T1
Unique NameM747DRAFT_297364-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851925.1:249445..252029+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297364-T1 ID=M747DRAFT_297364-T1|Name=M747DRAFT_297364-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2585bp|location=Sequence derived from alignment at KZ851925.1:249445..252029+ (Aspergillus niger ATCC 13496)
CCAACTTTCACCCCCCTTTCACATTCACATTTTCACTATGGGTGTCGGTC
GTCGTATGAAGAAGCAGGGCCCTCCGGCCCCGCTGGATGAGTCTAAGATC
ACCATCTTCAAGAAGCGCAAGGCTGGTGAGCCCGAGTCGAAGCCGGAGAC
GGGAAAGAAGCGGAGAAGAGCTGATGCCGATGAGGAGAATGTCGCAAAGC
CCGTCGTCAAGAAGAAGGCCAATGGCGCTGCTAATGGCAAGGCGACCAAG
GCTGCGGCTAAGCCCAAGGCTGAGACTAAGCCCAAGGCTAAGGCTGTCGA
GAAGAAGCCGCAGTTCATGGATTCCGACGATGAGGACGAGGATGAGGATA
TGTCCGGTATTGAGGAAATGGATGCCGATGAGTTCGACGATCTGGATGGC
GTCAGTGATGGCTCCATGGATAGCCAGGAGGAGGACAACGACTCTTTCGT
GGACTCCGACGAAGATGACCACCCTCGCGAAGCCATGTTCTCCGACGACG
AAGACCTTTCCGACGCTGAAGAGAGGCTGACCGCCGCCAACATCGAGGGA
TTGTCGCGCAAGCTGGACCTGCAAAGACAGGAAGAAGAGGAGGAGGCCGA
GCGCGAAATGAAGGAATCGGCCATGCAGACCAACATCGCTGGTGACCGTC
CCGATGTCTTTGGCGACGCCGAGGGCACTCAGCCCGGCCTGGCTCCCGAT
CTTCAGCTGCTTCGTACCCGAATCACCGACACCATCCGTATCCTGGGTGA
CCTGAAGACGCTTGGTGCCCCCGGCAAGTCTCGTACCGATTACACTGAGC
TGCTCATCGCCGACATCTGCACCTACTATGGCTACACCCCCTACCTCGCC
GAGAAGCTCTTCAACCTCTTCACCCCCATGGAAGCCTTCGCCTTCTTCGA
AGCCAACGAAACCCCCCGTCCCGTCGTCATCCGTACCAACACCCTCCGTA
CCAACCGTCGTTCCCTCGCCCAGGCTCTGATCAACCGTGGTGTCGTGCTT
GAGCCCGTTGGCAAGTGGTCCAAGGTTGGTCTTCAGGTCTTCGAATCCGC
TGTTCCCCTCGGTGCCACCCCCGAGTACCTGGCCGGTCACTACATCATCC
AGGCCGCCTCTTCCTTCCTCCCCGTCATGGCCCTCGCCCCTCAACCCAAC
GAGCGTGTTCTCGATATGGCCTCCGCCCCCGGTGGTAAGACCACCTACAT
CTCTGCCCTGATGCGCAACACCGGCTGCGTCATCGCCAACGATGCCAGCA
AGCCTCGTGCCAAGGGTCTGATCGGTAACATCCACCGTCTGGGCTGCAAG
AACACCATCGTGACCAACATGGACGCCCGCACCGCCTTCCCCAAGGCCAT
GGGCGGTTTCGACCGTGTCCTGCTCGATGCCCCTTGCACCGGTACCGGTG
TTATTTCCAAGGACCCCGGCGTCAAGACCTCCAAGAACGAGCGCGACTTC
CTCGCCATCCCCCACATGCAGCGCCAGCTTCTTCTGGCCGCCATCGACTC
CGTCGACCATGCCTCCAAGACCGGCGGCTACGTCGTCTACTCCACCTGCA
GTGTCACCGTCGAGGAGAACGAAGCCGTCGTGCAGTACGTCCTGCGCAAG
CGCCCCAACGTCAAGCTCGTCGACACCGGCCTCGGCGACTTCGGCAGCCC
CGGTATGACCAGCTACATGGGCAAGCACTTCGATCCCAAGATGACCCTGA
CGAGACGCTACTTCCCCCACCGCGAGAACGTCGACGGTTTCTTCGTCTGC
AAGCTCAAGAAGACTGCCGCCACCCCTACCCCCAAGCCTGGCGATGCCGC
TGCCGCTGCCCCTACCGACGGCAACTCCGCCAAGAAGTCCAAGACCCTCT
CCGTCGCCTCCACCACCACCGATGACGACGAACCCATCGACAAGACCCCC
ATCACCGACGAAGACGGCATGGTCATTGAAACCGAAGGCGGCAGCTTCGG
TCCCTTCGAAGAAGATGAGGAGGACGCTGCTCGCATCGCCCGCGCTGAGC
GCAACCGTCTCCGCCGCAAGGGTCTGAACCCCAAGGCTATTCTCAACAAG
CCCGCCAAGTCCAAGTCCAAGGACGAGTCATCCGCCCCTACCGAGAAGAC
CGAGGAGAAGGAGAAGAAGAAGGAGGAATCCCCCAAGAGGGAGACCCCCG
CGAAGAAGGAATCCAAGGAATCCCCCAAGCCGAAGGCCGATTCCAAGCCC
ACCAAGACCAAGACCGAGACAGCAGAACCCTCTACGACAAAGAAGCAGCA
ACAAAAACCCACCACCGCACAAGAACCCACAGAGAAGAAGAAGAAGACTA
CTGCCAAGAAGGCAAGCAAGAAATAAGCCATCCATCATCGGCTTAATTCA
TCCTTCTTTACCTTCTTCTTCTCTTCTTTGTAATTTACATATGTGGTGAT
TGTTGATGATGTTGTTTCTTGTTTGACATAAAAAGCATTTGTCTTGTATT
GTTGGTCTGTATGGGCGGCGCATGCACATGTCTTCTATTTCTCTTTTTTT
TTTTTCTTTGATATGATGATGGTGGTAGATAGATAGCTTCGTTCTACTTG
GGCTGGATGAGTCGAGTCAAGTCAATAGATACCAT
back to top

Coding sequence (CDS) from alignment at KZ851925.1:249445..252029+

>M747DRAFT_297364-T1 ID=M747DRAFT_297364-T1|Name=M747DRAFT_297364-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2289bp|location=Sequence derived from alignment at KZ851925.1:249445..252029+ (Aspergillus niger ATCC 13496)
ATGGGTGTCGGTCGTCGTATGAAGAAGCAGGGCCCTCCGGCCCCGCTGGA
TGAGTCTAAGATCACCATCTTCAAGAAGCGCAAGGCTGGTGAGCCCGAGT
CGAAGCCGGAGACGGGAAAGAAGCGGAGAAGAGCTGATGCCGATGAGGAG
AATGTCGCAAAGCCCGTCGTCAAGAAGAAGGCCAATGGCGCTGCTAATGG
CAAGGCGACCAAGGCTGCGGCTAAGCCCAAGGCTGAGACTAAGCCCAAGG
CTAAGGCTGTCGAGAAGAAGCCGCAGTTCATGGATTCCGACGATGAGGAC
GAGGATGAGGATATGTCCGGTATTGAGGAAATGGATGCCGATGAGTTCGA
CGATCTGGATGGCGTCAGTGATGGCTCCATGGATAGCCAGGAGGAGGACA
ACGACTCTTTCGTGGACTCCGACGAAGATGACCACCCTCGCGAAGCCATG
TTCTCCGACGACGAAGACCTTTCCGACGCTGAAGAGAGGCTGACCGCCGC
CAACATCGAGGGATTGTCGCGCAAGCTGGACCTGCAAAGACAGGAAGAAG
AGGAGGAGGCCGAGCGCGAAATGAAGGAATCGGCCATGCAGACCAACATC
GCTGGTGACCGTCCCGATGTCTTTGGCGACGCCGAGGGCACTCAGCCCGG
CCTGGCTCCCGATCTTCAGCTGCTTCGTACCCGAATCACCGACACCATCC
GTATCCTGGGTGACCTGAAGACGCTTGGTGCCCCCGGCAAGTCTCGTACC
GATTACACTGAGCTGCTCATCGCCGACATCTGCACCTACTATGGCTACAC
CCCCTACCTCGCCGAGAAGCTCTTCAACCTCTTCACCCCCATGGAAGCCT
TCGCCTTCTTCGAAGCCAACGAAACCCCCCGTCCCGTCGTCATCCGTACC
AACACCCTCCGTACCAACCGTCGTTCCCTCGCCCAGGCTCTGATCAACCG
TGGTGTCGTGCTTGAGCCCGTTGGCAAGTGGTCCAAGGTTGGTCTTCAGG
TCTTCGAATCCGCTGTTCCCCTCGGTGCCACCCCCGAGTACCTGGCCGGT
CACTACATCATCCAGGCCGCCTCTTCCTTCCTCCCCGTCATGGCCCTCGC
CCCTCAACCCAACGAGCGTGTTCTCGATATGGCCTCCGCCCCCGGTGGTA
AGACCACCTACATCTCTGCCCTGATGCGCAACACCGGCTGCGTCATCGCC
AACGATGCCAGCAAGCCTCGTGCCAAGGGTCTGATCGGTAACATCCACCG
TCTGGGCTGCAAGAACACCATCGTGACCAACATGGACGCCCGCACCGCCT
TCCCCAAGGCCATGGGCGGTTTCGACCGTGTCCTGCTCGATGCCCCTTGC
ACCGGTACCGGTGTTATTTCCAAGGACCCCGGCGTCAAGACCTCCAAGAA
CGAGCGCGACTTCCTCGCCATCCCCCACATGCAGCGCCAGCTTCTTCTGG
CCGCCATCGACTCCGTCGACCATGCCTCCAAGACCGGCGGCTACGTCGTC
TACTCCACCTGCAGTGTCACCGTCGAGGAGAACGAAGCCGTCGTGCAGTA
CGTCCTGCGCAAGCGCCCCAACGTCAAGCTCGTCGACACCGGCCTCGGCG
ACTTCGGCAGCCCCGGTATGACCAGCTACATGGGCAAGCACTTCGATCCC
AAGATGACCCTGACGAGACGCTACTTCCCCCACCGCGAGAACGTCGACGG
TTTCTTCGTCTGCAAGCTCAAGAAGACTGCCGCCACCCCTACCCCCAAGC
CTGGCGATGCCGCTGCCGCTGCCCCTACCGACGGCAACTCCGCCAAGAAG
TCCAAGACCCTCTCCGTCGCCTCCACCACCACCGATGACGACGAACCCAT
CGACAAGACCCCCATCACCGACGAAGACGGCATGGTCATTGAAACCGAAG
GCGGCAGCTTCGGTCCCTTCGAAGAAGATGAGGAGGACGCTGCTCGCATC
GCCCGCGCTGAGCGCAACCGTCTCCGCCGCAAGGGTCTGAACCCCAAGGC
TATTCTCAACAAGCCCGCCAAGTCCAAGTCCAAGGACGAGTCATCCGCCC
CTACCGAGAAGACCGAGGAGAAGGAGAAGAAGAAGGAGGAATCCCCCAAG
AGGGAGACCCCCGCGAAGAAGGAATCCAAGGAATCCCCCAAGCCGAAGGC
CGATTCCAAGCCCACCAAGACCAAGACCGAGACAGCAGAACCCTCTACGA
CAAAGAAGCAGCAACAAAAACCCACCACCGCACAAGAACCCACAGAGAAG
AAGAAGAAGACTACTGCCAAGAAGGCAAGCAAGAAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0008757S-adenosylmethionine-dependent methyltransferase activity
GO:0008168methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_297364M747DRAFT_297364Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297364-T1.utr5p1M747DRAFT_297364-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297364-T1.exon1M747DRAFT_297364-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297364-T1.cdsM747DRAFT_297364-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297364-T1.utr3p1M747DRAFT_297364-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297364-T1M747DRAFT_297364-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR018314
DBxrefInterPro:IPR031341
DBxrefInterPro:IPR011023
DBxrefInterPro:IPR001678
DBxrefInterPro:IPR023273
DBxrefInterPro:IPR023267
DBxrefPFAM:PF17125
DBxrefPFAM:PF01189
ProductNOL1/NOP2/sun family putative RNA met
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851925.1supercontigKZ851925.1:249445..252029 +
Powered by Drupal