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M747DRAFT_297489-T1, M747DRAFT_297489-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297489-T1
Unique NameM747DRAFT_297489-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851926.1:274968..276340-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297489-T1 ID=M747DRAFT_297489-T1|Name=M747DRAFT_297489-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1373bp|location=Sequence derived from alignment at KZ851926.1:274968..276340- (Aspergillus niger ATCC 13496)
CGAACATCATCCGCCAACGACCGTCGATACGCCGACATCAAGATGTGAGT
CCATCTTCAGCTCTTGATTTTTGCTGCATCAAGGGGGGGAAATACTGTTC
GTCGCTGGACTGTATATCCTCCCCCTCTTCCCCCGTTCAGACGCCCCGGA
TTCGCCTCCAGATGGCACTTTTTCGTGTCATACGCAGCAGCAACCCCCCG
ATCGGTTTGGACTTCATGCTGACCGACTGCTTTTTTTTTGCACCACACAG
GGTCAACCTTCGCACCCAGAAGCGCCTCGCCGCCTCCGTGGTGGGCTGCG
GCAAGCGCAAGATTTGGCTCGACCCCAATGAGATGAATGAGATCTCCAAC
GCCAACTCCCGCCAGACCATCCGCAAGCTCGTCAGCGATGGCCTCATCAT
CCGCAAGCCCGTCACCATGCACTCCCGCTCCCGTGCCCGTGAGCTCGCCG
CCGCCCGCCGCATCGGCAGACACCGTGGTCTGGGTAAGCGCAAGGGTACC
AAGGAGGCTCGTATGCCCAGGTATGCTCGTTGTCCAACCCCTTTGAGTGC
CATTGCAAGGATTTTCTCGGTCGCCCACGACTATCAGCGAGATGCCATAT
GCGAAGGAAAATGATAAAATGGATGAGTGCTGATGGATATCGGATTAAAG
CCAGATCCTCTGGATGCGCCGCATGCGTATTCTCCGTCGCCTGCTCGTCC
GCTACCGTGCCTCCGGCAAGATCGACAAGCACCTGTACCACGAGCTCTAC
CACCTGAGCAAGGGTAACACCTTCAAGCACAAGCGTTCCCTCATCGAGCA
CGTAAGTTTCGCCGCCATTTGCTTTTTTGATGAAATCGCTATACTCTCGA
GACTACGAAACGGAACGAGTGTATACGGTCTTCTGTTGGGAAGATGAGGA
AATAGGGGCTAACATGATCTCTTTCCATACTACAGATCCAGAAGGCCAAG
GCTGAGCGTCACCGTGAGCGCGTCCTCAAGGAGGAGATGGATGCTAAGCG
TGCCAAGAACAAGGCTCTCCGTGAGAGACGTCTGGAGCGCAAGGAGGCCA
AGCAGAACGCCCTCATTGCTGAGGCTCAGGAGTAATTTTCCTCAGCTAAG
GAACTTGGGCGGTGCGGAGGTTGAAACGGGGGAGGGAATCGATCAGCCCA
CGGACTCTGATCGACCACTCCGTGTTCGTTGCAGGTCTGGCTCGGTGGCT
CGATTCATCCGGGACGGGGTTGTTTGGATCGTATCGGGAGCCTGGAACAG
GGTTGGGGATCAAGGATATGCACCATCATCACCATCATCGTCATCCCCGT
CTCTTCCTCTTCACGGGGAAGAGCATGTGAAAGGACCACGCAAAAAAAAG
GAAAAAGACCTAACTGTTAAAGC
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Coding sequence (CDS) from alignment at KZ851926.1:274968..276340-

>M747DRAFT_297489-T1 ID=M747DRAFT_297489-T1|Name=M747DRAFT_297489-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1980bp|location=Sequence derived from alignment at KZ851926.1:274968..276340- (Aspergillus niger ATCC 13496)
ATCCAGAAGGCCAAGGCTGAGCGTCACCGTGAGCGCGTCCTCAAGGAGGA
GATGGATGCTAAGCGTGCCAAGAACAAGGCTCTCCGTGAGAGACGTCTGG
AGCGCAAGGAGGCCAAGCAGAACGCCCTCATTGCTGAGGCTCAGGAGTAA
CCAGATCCTCTGGATGCGCCGCATGCGTATTCTCCGTCGCCTGCTCGTCC
GCTACCGTGCCTCCGGCAAGATCGACAAGCACCTGTACCACGAGCTCTAC
CACCTGAGCAAGGGTAACACCTTCAAGCACAAGCGTTCCCTCATCGAGCA
CATGGCACTTTTTCGTGTCATACGCAGCAGCAACCCCCCGATCGGTTTGG
ACTTCATGCTGACCGACTGCTTTTTTTTTGCACCACACAGGGTCAACCTT
CGCACCCAGAAGCGCCTCGCCGCCTCCGTGGTGGGCTGCGGCAAGCGCAA
GATTTGGCTCGACCCCAATGAGATGAATGAGATCTCCAACGCCAACTCCC
GCCAGACCATCCGCAAGCTCGTCAGCGATGGCCTCATCATCCGCAAGCCC
GTCACCATGCACTCCCGCTCCCGTGCCCGTGAGCTCGCCGCCGCCCGCCG
CATCGGCAGACACCGTGGTCTGGGTAAGCGCAAGGGTACCAAGGAGGCTC
GTATGCCCAGATCCAGAAGGCCAAGGCTGAGCGTCACCGTGAGCGCGTCC
TCAAGGAGGAGATGGATGCTAAGCGTGCCAAGAACAAGGCTCTCCGTGAG
AGACGTCTGGAGCGCAAGGAGGCCAAGCAGAACGCCCTCATTGCTGAGGC
TCAGGAGTAACCAGATCCTCTGGATGCGCCGCATGCGTATTCTCCGTCGC
CTGCTCGTCCGCTACCGTGCCTCCGGCAAGATCGACAAGCACCTGTACCA
CGAGCTCTACCACCTGAGCAAGGGTAACACCTTCAAGCACAAGCGTTCCC
TCATCGAGCACATGGCACTTTTTCGTGTCATACGCAGCAGCAACCCCCCG
ATCGGTTTGGACTTCATGCTGACCGACTGCTTTTTTTTTGCACCACACAG
GGTCAACCTTCGCACCCAGAAGCGCCTCGCCGCCTCCGTGGTGGGCTGCG
GCAAGCGCAAGATTTGGCTCGACCCCAATGAGATGAATGAGATCTCCAAC
GCCAACTCCCGCCAGACCATCCGCAAGCTCGTCAGCGATGGCCTCATCAT
CCGCAAGCCCGTCACCATGCACTCCCGCTCCCGTGCCCGTGAGCTCGCCG
CCGCCCGCCGCATCGGCAGACACCGTGGTCTGGGTAAGCGCAAGGGTACC
AAGGAGGCTCGTATGCCCAGATCCAGAAGGCCAAGGCTGAGCGTCACCGT
GAGCGCGTCCTCAAGGAGGAGATGGATGCTAAGCGTGCCAAGAACAAGGC
TCTCCGTGAGAGACGTCTGGAGCGCAAGGAGGCCAAGCAGAACGCCCTCA
TTGCTGAGGCTCAGGAGTAACCAGATCCTCTGGATGCGCCGCATGCGTAT
TCTCCGTCGCCTGCTCGTCCGCTACCGTGCCTCCGGCAAGATCGACAAGC
ACCTGTACCACGAGCTCTACCACCTGAGCAAGGGTAACACCTTCAAGCAC
AAGCGTTCCCTCATCGAGCACATGGCACTTTTTCGTGTCATACGCAGCAG
CAACCCCCCGATCGGTTTGGACTTCATGCTGACCGACTGCTTTTTTTTTG
CACCACACAGGGTCAACCTTCGCACCCAGAAGCGCCTCGCCGCCTCCGTG
GTGGGCTGCGGCAAGCGCAAGATTTGGCTCGACCCCAATGAGATGAATGA
GATCTCCAACGCCAACTCCCGCCAGACCATCCGCAAGCTCGTCAGCGATG
GCCTCATCATCCGCAAGCCCGTCACCATGCACTCCCGCTCCCGTGCCCGT
GAGCTCGCCGCCGCCCGCCGCATCGGCAGACACCGTGGTCTGGGTAAGCG
CAAGGGTACCAAGGAGGCTCGTATGCCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0022625cytosolic large ribosomal subunit
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_297489M747DRAFT_297489Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297489-T1M747DRAFT_297489-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297489-T1.cdsM747DRAFT_297489-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297489-T1.utr3p1M747DRAFT_297489-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297489-T1.exon3M747DRAFT_297489-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_297489-T1.exon2M747DRAFT_297489-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297489-T1.exon1M747DRAFT_297489-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297489-T1.utr5p1M747DRAFT_297489-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035970
DBxrefInterPro:IPR033935
DBxrefInterPro:IPR023638
DBxrefInterPro:IPR015972
DBxrefInterPro:IPR000196
DBxrefPFAM:PF01280
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851926.1supercontigKZ851926.1:274968..276340 -
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