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M747DRAFT_297572-T1, M747DRAFT_297572-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297572-T1
Unique NameM747DRAFT_297572-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851927.1:120097..121861+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297572-T1 ID=M747DRAFT_297572-T1|Name=M747DRAFT_297572-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1765bp|location=Sequence derived from alignment at KZ851927.1:120097..121861+ (Aspergillus niger ATCC 13496)
AGCTCTCCCTGCTAGCTTCTTCCCTGCTTTCTTGCCACCGCAGCGGATTG
CATCCTATTTGCTACTGACTACAGCTCAGACTGTAGCGAAAACCTACGAT
TTCAGTTGATCATCGTCTTAAGACCTATAGGGTACTAGTCCAGCTCGAAT
CATGGTGAGTTCCCCGCTTAGGCGCCGTTATGTACTGAGGTGTATACATG
CTGATACCCGGATGATGACAGTTTCGTTCTGGATACTGGGATGACGATCC
CATGAACGGAGTCATGGGTGGTTCCATGTTCCGCCATGGAGCTGCTCGTC
GTTTCGATGAATACTACCGCTGCTATCCTGTCGCCATGATGCCCGGCCCG
GAGAGAGAGAACGTGAACCACGGCGGCAAGGTCATCATGCCGCCCAGCGC
TCTTGACAAGCTTACTCGCCTTCATATTACGTATCCGATGCTGTTCGAGC
TTCACAACGGTGCACGGGAAAGGTTGACGCACGCTGGTGTACTAGAGTTC
ATTGCGGAAGAGGGGAAGATCTATCTACCTTTCTGGGTAATGTGCTTCTC
ATGATAGGTACCCTGCAGGATACTGACTAGTTGATCTCCCGCAGCTCATG
CAAACTCTCCTTCTGGAACCCGGTGATCTCGTACAGGTCAAGTCGACCGA
TCTCCCACCCGGCCAATTCATCAAGCTGCAAGCTCAATCTACCTCATTCC
TCGATATAAGTGACCCGAAGGCCGTGCTGGAGAATGCTTTCCGTAACTTC
TCCTGTCTGACCAAGGGAGATGTCTTCACATTTGCATACAACGACCAGGT
TTATGAGATGGCGGTCTTGGAAACCAAGCCATCCACCGACACGAATGCCA
TTTCCGTGCTCGAGACAGATCTAGAAGTGGACTTTGCGCCTCCTGTGGGC
TATGAGGAGCCTCAACGGCCCAGCGGCACCAGTACTCCTCGTAGTGGAGT
AAGCAACAAGCTGCCCTCTGGTGGGCTGCTTCATCCCCATGGAACCATGG
CACAGGCGATCAACTACGCTGCTATTGCCCCGGAGTCGACTGATGCTGCG
GCGGGTGCCCGAGCGGTCTCATCGAACTTCCTTAGTGGAGGACAGCGTCT
GAATGCCAAGAAGGGAAGCAAAACATCCACACCAAAACCGTCTACTCCTA
CCCCAGGAACAACGAACCCGCAGCATCCCCCTCCTGTCAGGAAGACCAAC
GGCCCGCAACCTCTGCGGTTAGGCCACAACCAGCTATTCTTTGGATATGC
AATCAAGCCAGTGAAGAAGCGCGACGAGAGCGGACAGGTACTCGAGGACA
AGCCTCGCTTCCAGGGATCTGGTCAAACATTACGAGGAAAGAAGAAAGAC
GCAAGTGGCTCGGCAACCCCTACTTAAGATAACGCCAGACAAGGCTGGAT
TAATGAACGCCGATCGGCTATGATATTATGGGTCTCCCTTGCACGGTATA
GGGGAAGCAGCCCCTGATCATTCTACCAGGACATGACCGCTGGCTTCCCA
GGCACGCTATATTTGACTCATTGGATGGGCTATAGAAGGCAGCGCGAAAG
CGTAGGACGGGAATTTAGAGCATAGCGGGGACAGGCGTTAACGAGGCTAT
TTCGATCACATCAGGCTTTGATCCACTTGCAATGCCAAACACCACTTGGT
AGGATGTATCTATCTATCGCTAAGCCATCAACTGGCCGTTTCTTGGCAAC
GGGGGACGGACCTACAAAGTAACACTAAAGTGACTAAAAAGGCACTAGAA
GTAGAATTAACCGCG
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Coding sequence (CDS) from alignment at KZ851927.1:120097..121861+

>M747DRAFT_297572-T1 ID=M747DRAFT_297572-T1|Name=M747DRAFT_297572-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3303bp|location=Sequence derived from alignment at KZ851927.1:120097..121861+ (Aspergillus niger ATCC 13496)
ATGTTTCGTTCTGGATACTGGGATGACGATCCCATGAACGGAGTCATGGG
TGGTTCCATGTTCCGCCATGGAGCTGCTCGTCGTTTCGATGAATACTACC
GCTGCTATCCTGTCGCCATGATGCCCGGCCCGGAGAGAGAGAACGTGAAC
CACGGCGGCAAGGTCATCATGCCGCCCAGCGCTCTTGACAAGCTTACTCG
CCTTCATATTACGTATCCGATGCTGTTCGAGCTTCACAACGGTGCACGGG
AAAGGTTGACGCACGCTGGTGTACTAGAGTTCATTGCGGAAGAGGGGAAG
ATCTATCTACCTTTCTGGCTCATGCAAACTCTCCTTCTGGAACCCGGTGA
TCTCGTACAGGTCAAGTCGACCGATCTCCCACCCGGCCAATTCATCAAGC
TGCAAGCTCAATCTACCTCATTCCTCGATATAAGTGACCCGAAGGCCGTG
CTGGAGAATGCTTTCCGTAACTTCTCCTGTCTGACCAAGGGAGATGTCTT
CACATTTGCATACAACGACCAGGTTTATGAGATGGCGGTCTTGGAAACCA
AGCCATCCACCGACACGAATGCCATTTCCGTGCTCGAGACAGATCTAGAA
GTGGACTTTGCGCCTCCTGTGGGCTATGAGGAGCCTCAACGGCCCAGCGG
CACCAGTACTCCTCGTAGTGGAGTAAGCAACAAGCTGCCCTCTGGTGGGC
TGCTTCATCCCCATGGAACCATGGCACAGGCGATCAACTACGCTGCTATT
GCCCCGGAGTCGACTGATGCTGCGGCGGGTGCCCGAGCGGTCTCATCGAA
CTTCCTTAGTGGAGGACAGCGTCTGAATGCCAAGAAGGGAAGCAAAACAT
CCACACCAAAACCGTCTACTCCTACCCCAGGAACAACGAACCCGCAGCAT
CCCCCTCCTGTCAGGAAGACCAACGGCCCGCAACCTCTGCGGTTAGGCCA
CAACCAGCTATTCTTTGGATATGCAATCAAGCCAGTGAAGAAGCGCGACG
AGAGCGGACAGGTACTCGAGGACAAGCCTCGCTTCCAGGGATCTGGTCAA
ACATTACGAGGAAAGAAGAAAGACGCAAGTGGCTCGGCAACCCCTACTTA
AATGTTTCGTTCTGGATACTGGGATGACGATCCCATGAACGGAGTCATGG
GTGGTTCCATGTTCCGCCATGGAGCTGCTCGTCGTTTCGATGAATACTAC
CGCTGCTATCCTGTCGCCATGATGCCCGGCCCGGAGAGAGAGAACGTGAA
CCACGGCGGCAAGGTCATCATGCCGCCCAGCGCTCTTGACAAGCTTACTC
GCCTTCATATTACGTATCCGATGCTGTTCGAGCTTCACAACGGTGCACGG
GAAAGGTTGACGCACGCTGGTGTACTAGAGTTCATTGCGGAAGAGGGGAA
GATCTATCTACCTTTCTGGCTCATGCAAACTCTCCTTCTGGAACCCGGTG
ATCTCGTACAGGTCAAGTCGACCGATCTCCCACCCGGCCAATTCATCAAG
CTGCAAGCTCAATCTACCTCATTCCTCGATATAAGTGACCCGAAGGCCGT
GCTGGAGAATGCTTTCCGTAACTTCTCCTGTCTGACCAAGGGAGATGTCT
TCACATTTGCATACAACGACCAGGTTTATGAGATGGCGGTCTTGGAAACC
AAGCCATCCACCGACACGAATGCCATTTCCGTGCTCGAGACAGATCTAGA
AGTGGACTTTGCGCCTCCTGTGGGCTATGAGGAGCCTCAACGGCCCAGCG
GCACCAGTACTCCTCGTAGTGGAGTAAGCAACAAGCTGCCCTCTGGTGGG
CTGCTTCATCCCCATGGAACCATGGCACAGGCGATCAACTACGCTGCTAT
TGCCCCGGAGTCGACTGATGCTGCGGCGGGTGCCCGAGCGGTCTCATCGA
ACTTCCTTAGTGGAGGACAGCGTCTGAATGCCAAGAAGGGAAGCAAAACA
TCCACACCAAAACCGTCTACTCCTACCCCAGGAACAACGAACCCGCAGCA
TCCCCCTCCTGTCAGGAAGACCAACGGCCCGCAACCTCTGCGGTTAGGCC
ACAACCAGCTATTCTTTGGATATGCAATCAAGCCAGTGAAGAAGCGCGAC
GAGAGCGGACAGGTACTCGAGGACAAGCCTCGCTTCCAGGGATCTGGTCA
AACATTACGAGGAAAGAAGAAAGACGCAAGTGGCTCGGCAACCCCTACTT
AAATGTTTCGTTCTGGATACTGGGATGACGATCCCATGAACGGAGTCATG
GGTGGTTCCATGTTCCGCCATGGAGCTGCTCGTCGTTTCGATGAATACTA
CCGCTGCTATCCTGTCGCCATGATGCCCGGCCCGGAGAGAGAGAACGTGA
ACCACGGCGGCAAGGTCATCATGCCGCCCAGCGCTCTTGACAAGCTTACT
CGCCTTCATATTACGTATCCGATGCTGTTCGAGCTTCACAACGGTGCACG
GGAAAGGTTGACGCACGCTGGTGTACTAGAGTTCATTGCGGAAGAGGGGA
AGATCTATCTACCTTTCTGGCTCATGCAAACTCTCCTTCTGGAACCCGGT
GATCTCGTACAGGTCAAGTCGACCGATCTCCCACCCGGCCAATTCATCAA
GCTGCAAGCTCAATCTACCTCATTCCTCGATATAAGTGACCCGAAGGCCG
TGCTGGAGAATGCTTTCCGTAACTTCTCCTGTCTGACCAAGGGAGATGTC
TTCACATTTGCATACAACGACCAGGTTTATGAGATGGCGGTCTTGGAAAC
CAAGCCATCCACCGACACGAATGCCATTTCCGTGCTCGAGACAGATCTAG
AAGTGGACTTTGCGCCTCCTGTGGGCTATGAGGAGCCTCAACGGCCCAGC
GGCACCAGTACTCCTCGTAGTGGAGTAAGCAACAAGCTGCCCTCTGGTGG
GCTGCTTCATCCCCATGGAACCATGGCACAGGCGATCAACTACGCTGCTA
TTGCCCCGGAGTCGACTGATGCTGCGGCGGGTGCCCGAGCGGTCTCATCG
AACTTCCTTAGTGGAGGACAGCGTCTGAATGCCAAGAAGGGAAGCAAAAC
ATCCACACCAAAACCGTCTACTCCTACCCCAGGAACAACGAACCCGCAGC
ATCCCCCTCCTGTCAGGAAGACCAACGGCCCGCAACCTCTGCGGTTAGGC
CACAACCAGCTATTCTTTGGATATGCAATCAAGCCAGTGAAGAAGCGCGA
CGAGAGCGGACAGGTACTCGAGGACAAGCCTCGCTTCCAGGGATCTGGTC
AAACATTACGAGGAAAGAAGAAAGACGCAAGTGGCTCGGCAACCCCTACT
TAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_297572M747DRAFT_297572Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297572-T1M747DRAFT_297572-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297572-T1.utr5p1M747DRAFT_297572-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297572-T1.exon1M747DRAFT_297572-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_297572-T1.exon2M747DRAFT_297572-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297572-T1.exon3M747DRAFT_297572-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297572-T1.cdsM747DRAFT_297572-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297572-T1.utr3p1M747DRAFT_297572-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263WLB
DBxrefInterPro:IPR042299
DBxrefInterPro:IPR004854
DBxrefPFAM:PF03152
Productubiquitin fusion degradation protein Ufd1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851927.1supercontigKZ851927.1:120097..121861 +
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