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M747DRAFT_297591-T1, M747DRAFT_297591-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297591-T1
Unique NameM747DRAFT_297591-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851927.1:186459..188014-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297591-T1 ID=M747DRAFT_297591-T1|Name=M747DRAFT_297591-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1556bp|location=Sequence derived from alignment at KZ851927.1:186459..188014- (Aspergillus niger ATCC 13496)
GTGACCCTCGTGGGATTGACAGCCAGAATTAAAGGGAAAGGAAATCGCAG
GTCGAGAATCTGAATCTATTACTCATTATCATTGGATGCGTCCGTCAACA
TGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGACGGAG
CGGTTCTCTGGGTACAGCTTCCCCCCCGCCTCCGGTATACGCCAGGCTAC
CAGCTAACAGCTCCATTCATGCTTCCTTCAGAACCCCGCCCGTATCAATC
GATCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGCC
AGAATCCAAAACCAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGGG
AGCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCCC
TACATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATCT
AGAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGCC
TGGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATTC
GATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGAC
TGCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTATC
GAGAGGAGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGTCACGGTG
ATCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGGT
GTTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAAA
ATGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGGT
GTGCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACGTCACTTT
CGGTATGTATTCGTTGTTATGCATCACCCACCGTTCGCAGTCACTAACCG
CTTCTAGTCTTGTTCCCTCGTCACCTAACCCCCCAGAGACGCTATGAGAA
CATCTCCCACATCCAGATATTCCGTGATTACTTCCATTACCACATCAAAG
CATCCAAGGTAGCTTTATATGTCATAATGCAGGCCAGTTCAATATGCTTA
CTAAGTCTCCAGGCATACATCCACACTAGGATGCGCAAGAGGACCGCAGA
CTTCCTTCAAGGTAAGAAGCGACCCCTAACAATTGTGGTATGTCCAGTTC
ACTAATGAATGATAGTTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCGA
GAAAGGAAGACGGCCAGTGGCCGTACTTTCAGGGTTCAGGGATAGAGAGC
TGGCTCAAGAATATAATCTTTGTAAATTGCAGGCGAGGGGTGACATACGC
ACATGCATAAGTCCATTTTTTTTTTTTTTTCTCTAGGATGTATAGATTGT
CGAGCATCATAACTTTTATCTTCCCATTTTTCCTTCCTTTCATTACTTTT
ATTATTTTTTCTTTTTTGGCCCTCTCAACCTCGCATTGTCAAAACGCATG
ACAGCTGCATGTGGCTTGAAGTAGTAGTGCGGCTGCCTTGCTTTGTTTTA
TTTGCT
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Coding sequence (CDS) from alignment at KZ851927.1:186459..188014-

>M747DRAFT_297591-T1 ID=M747DRAFT_297591-T1|Name=M747DRAFT_297591-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4815bp|location=Sequence derived from alignment at KZ851927.1:186459..188014- (Aspergillus niger ATCC 13496)
TTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCGAGAAAGGAAGACGGCC
AGTGGCCGTACTTTCAGGGTTCAGGGATAGGCATACATCCACACTAGGAT
GCGCAAGAGGACCGCAGACTTCCTTCAAGTCTTGTTCCCTCGTCACCTAA
CCCCCCAGAGACGCTATGAGAACATCTCCCACATCCAGATATTCCGTGAT
TACTTCCATTACCACATCAAAGCATCCAAGAACCCCGCCCGTATCAATCG
ATCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGCCA
GAATCCAAAACCAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGGGA
GCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCCCT
ACATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATCTA
GAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGCCT
GGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATTCG
ATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGACT
GCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTATCG
AGAGGAGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGTCACGGTGA
TCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGGTG
TTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAAAA
TGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGGTG
TGCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACGTCACTTTC
GATGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGACGG
AGCGGTTCTCTGGTTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCGAGA
AAGGAAGACGGCCAGTGGCCGTACTTTCAGGGTTCAGGGATAGGCATACA
TCCACACTAGGATGCGCAAGAGGACCGCAGACTTCCTTCAAGTCTTGTTC
CCTCGTCACCTAACCCCCCAGAGACGCTATGAGAACATCTCCCACATCCA
GATATTCCGTGATTACTTCCATTACCACATCAAAGCATCCAAGAACCCCG
CCCGTATCAATCGATCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCA
TCTGTCTACGCCAGAATCCAAAACCAAGATCCTCATCTCCATCAACGTGA
AATGCTTCCGGGAGCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGG
GAATACGGCCCCTACATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGT
CCTGATCGATCTAGAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAAC
TCATCATGCGCCTGGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTC
GAGAGAGCATTCGATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATA
CACAAGCGAGACTGCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGG
CCATTCACTATCGAGAGGAGGAAGCGATTTATATCAAGGCCAGCCATGAT
CGTGTCACGGTGATCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCAT
CTTTGGCAAGGTGTTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCC
TCACCCTGCAAAATGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTG
GAGCTGGCCGGTGTGCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAG
CTACGTCACTTTCGATGCTTTTGCTAGACTATCACAACGTTCTCATCCAC
TCCCTCCTGACGGAGCGGTTCTCTGGTTCTCAACCGGGCGCGGCCCGAGA
ACGAGGAGCGAGAAAGGAAGACGGCCAGTGGCCGTACTTTCAGGGTTCAG
GGATAGGCATACATCCACACTAGGATGCGCAAGAGGACCGCAGACTTCCT
TCAAGTCTTGTTCCCTCGTCACCTAACCCCCCAGAGACGCTATGAGAACA
TCTCCCACATCCAGATATTCCGTGATTACTTCCATTACCACATCAAAGCA
TCCAAGAACCCCGCCCGTATCAATCGATCAGATCGTTTCCGACTTTGACG
GAGTGACCTTTCATCTGTCTACGCCAGAATCCAAAACCAAGATCCTCATC
TCCATCAACGTGAAATGCTTCCGGGAGCTTGTCCAGTACGGCGCCCAGGA
GGTGCTGGAAAGGGAATACGGCCCCTACATTGTCACCCCAGAGCCCGGCT
ATGACTTCTCCGTCCTGATCGATCTAGAGAACCTGCCCGCCGAGCAAGAG
GCGAAGGATGAACTCATCATGCGCCTGGCGCTGATGAAGCGCAACGCCAT
GGCCGCCCCCTTCGAGAGAGCATTCGATGAATTCGCCAAGTTAGCCGAAG
AGGCTTCGAGATACACAAGCGAGACTGCGCCCCAGGGAGTTAAGGAGGGA
GGAGAGGTTATGGCCATTCACTATCGAGAGGAGGAAGCGATTTATATCAA
GGCCAGCCATGATCGTGTCACGGTGATCTTCAGCACAGTGTTCCGGGAGG
AGACAGATCGCATCTTTGGCAAGGTGTTCCTGCAGGAATTCGTCGATGCC
AGACGCCGTGTCCTCACCCTGCAAAATGCTCCCCAGGTACTCTTCCGAAA
CGACTGTCCTCTGGAGCTGGCCGGTGTGCCTGGCCTTCAGAACGGTAATG
ACGGTAGAATCAGCTACGTCACTTTCGATGCTTTTGCTAGACTATCACAA
CGTTCTCATCCACTCCCTCCTGACGGAGCGGTTCTCTGGTTCTCAACCGG
GCGCGGCCCGAGAACGAGGAGCGAGAAAGGAAGACGGCCAGTGGCCGTAC
TTTCAGGGTTCAGGGATAGGCATACATCCACACTAGGATGCGCAAGAGGA
CCGCAGACTTCCTTCAAGTCTTGTTCCCTCGTCACCTAACCCCCCAGAGA
CGCTATGAGAACATCTCCCACATCCAGATATTCCGTGATTACTTCCATTA
CCACATCAAAGCATCCAAGAACCCCGCCCGTATCAATCGATCAGATCGTT
TCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGCCAGAATCCAAAAC
CAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGGGAGCTTGTCCAGT
ACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCCCTACATTGTCACC
CCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATCTAGAGAACCTGCC
CGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGCCTGGCGCTGATGA
AGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATTCGATGAATTCGCC
AAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGACTGCGCCCCAGGG
AGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTATCGAGAGGAGGAAG
CGATTTATATCAAGGCCAGCCATGATCGTGTCACGGTGATCTTCAGCACA
GTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGGTGTTCCTGCAGGA
ATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAAAATGCTCCCCAGG
TACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGGTGTGCCTGGCCTT
CAGAACGGTAATGACGGTAGAATCAGCTACGTCACTTTCGATGCTTTTGC
TAGACTATCACAACGTTCTCATCCACTCCCTCCTGACGGAGCGGTTCTCT
GGTTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCGAGAAAGGAAGACGG
CCAGTGGCCGTACTTTCAGGGTTCAGGGATAGGCATACATCCACACTAGG
ATGCGCAAGAGGACCGCAGACTTCCTTCAAGTCTTGTTCCCTCGTCACCT
AACCCCCCAGAGACGCTATGAGAACATCTCCCACATCCAGATATTCCGTG
ATTACTTCCATTACCACATCAAAGCATCCAAGAACCCCGCCCGTATCAAT
CGATCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGC
CAGAATCCAAAACCAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGG
GAGCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCC
CTACATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATC
TAGAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGC
CTGGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATT
CGATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGA
CTGCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTAT
CGAGAGGAGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGTCACGGT
GATCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGG
TGTTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAA
AATGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGG
TGTGCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACGTCACTT
TCGATGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGAC
GGAGCGGTTCTCTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0030041actin filament polymerization
GO:0030833regulation of actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARC2M747DRAFT_297591Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297591-T1M747DRAFT_297591-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297591-T1.cdsM747DRAFT_297591-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297591-T1.utr3p1M747DRAFT_297591-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297591-T1.exon5M747DRAFT_297591-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_297591-T1.exon4M747DRAFT_297591-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_297591-T1.exon3M747DRAFT_297591-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_297591-T1.exon2M747DRAFT_297591-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297591-T1.exon1M747DRAFT_297591-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297591-T1.utr5p1M747DRAFT_297591-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263EQZ
DBxrefInterPro:IPR007188
DBxrefInterPro:IPR034666
DBxrefPFAM:PF04045
ProductARP2/3 actin-organizing complex subunit Arc34
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851927.1supercontigKZ851927.1:186459..188014 -
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