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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851928.1:251901..253153+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_297738-T1 ID=M747DRAFT_297738-T1|Name=M747DRAFT_297738-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1253bp|location=Sequence derived from alignment at KZ851928.1:251901..253153+ (Aspergillus niger ATCC 13496)
CTTCACGAGGTTCAATTGTCTCTTACAACTTACGCATAAATTTCTTCCTC
AATTACTATCGTGTACTCTAGGATGTCACAAAACACTACGACCACAGTAC
AGGAGCTACGCCTGGGCACCCGCAATTCCAAACTGGCACTAGTACAAGCG
GAGCATGTTTCCAAGGAGCTGACCAGTGCTCACCCCGGAGTCCAGTTTCC
CTGGCAAACGGTGGTGGTGCGCGGCGATGCCGACAAAAGTAGCCCTTTCC
TGAAATTTGCAGGGCCATCCGACGCAGCAAAGAACATCTGGACCGAAGAG
ATGGAAACCAAGCTGTGCGCAGGAGAGCTGGACCTCCTCGTGCATTGCCT
CAAAGATATGCCGACGCGTCTACCAGAAACCTGCACACTAGGGGCCATTG
TTTATCGGGAAGATCCCACTGATGCGTTGGTGATAAAGGAGGGGCTGCGG
TCGCAGTATACGGATCTGAGTCAACTGCCCCCCGGTTCTGTGGTGGGCAC
TAGTTCCACTAGACGGAAAGCCCTACTTCGATACAGATACCCGCATTTGA
AAGTGGAGGAATGCCGCGGGAACCTGTAAGAAGACTGCCCCTTTTTGTCA
CTGAGAGTTGACTCTTTTCTGACTTGACATGGCAGCGGAACACGGCTGAA
AAAGCTAGATGACCCAGAAGGTCCATTTTCGGCAATCATCCTGGCCACGG
CCGGTATGGTCCGCATCAATCTGGAAGATCGCATTACGAAACGCTTGCCT
CCCTCGGAGTTCCCGTACGCTGTCGGTCAGGGCGCCCTGGGCATTGAAAT
CCGCAAGGAGGACGCCCAGACAAAGACCATGGTTCGAAAAATCGAAGACC
TGGTTACCCGTCGGATCTGTCTGGCAGAGCGGTCACTGCTACGCACTCTT
CAGGGCGGCTGCTCGTCTCCAGTCGCAGTACATTGCACTGTTGAGCAGGC
ACCAACAGCTTCCTCGCCAGCTCAATTGCGACTAGATGGTACTATAATTC
ATCCCCACGGGACAACTTTGCTATCTGAACGGACGACAGCGGAAGTGGGA
ACGGACGAGGATGCCGAGGCGTTGGGTGCTACGGTCGCTCAGCAATTGTT
GAAGAATGGCGGACAAGCATTGCTGGAAGAGATTCGTCTGTTACAAGAGA
CCATTGCGACAGATGCAAAATAGAAGAGGACCTGAATATGTACCCTTAAC
TAGTAGAATTAATCCCCGCTCAATGTACATCGCCACGACTGCTTATTTCT
CAC back to topCoding sequence (CDS) from alignment at KZ851928.1:251901..253153+ >M747DRAFT_297738-T1 ID=M747DRAFT_297738-T1|Name=M747DRAFT_297738-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2082bp|location=Sequence derived from alignment at KZ851928.1:251901..253153+ (Aspergillus niger ATCC 13496)
ATGTCACAAAACACTACGACCACAGTACAGGAGCTACGCCTGGGCACCCG
CAATTCCAAACTGGCACTAGTACAAGCGGAGCATGTTTCCAAGGAGCTGA
CCAGTGCTCACCCCGGAGTCCAGTTTCCCTGGCAAACGGTGGTGGTGCGC
GGCGATGCCGACAAAAGTAGCCCTTTCCTGAAATTTGCAGGGCCATCCGA
CGCAGCAAAGAACATCTGGACCGAAGAGATGGAAACCAAGCTGTGCGCAG
GAGAGCTGGACCTCCTCGTGCATTGCCTCAAAGATATGCCGACGCGTCTA
CCAGAAACCTGCACACTAGGGGCCATTGTTTATCGGGAAGATCCCACTGA
TGCGTTGGTGATAAAGGAGGGGCTGCGGTCGCAGTATACGGATCTGAGTC
AACTGCCCCCCGGTTCTGTGGTGGGCACTAGTTCCACTAGACGGAAAGCC
CTACTTCGATACAGATACCCGCATTTGAAAGTGGAGGAATGCCGCGGGAA
CCTCGGAACACGGCTGAAAAAGCTAGATGACCCAGAAGGTCCATTTTCGG
CAATCATCCTGGCCACGGCCGGTATGGTCCGCATCAATCTGGAAGATCGC
ATTACGAAACGCTTGCCTCCCTCGGAGTTCCCGTACGCTGTCGGTCAGGG
CGCCCTGGGCATTGAAATCCGCAAGGAGGACGCCCAGACAAAGACCATGG
TTCGAAAAATCGAAGACCTGGTTACCCGTCGGATCTGTCTGGCAGAGCGG
TCACTGCTACGCACTCTTCAGGGCGGCTGCTCGTCTCCAGTCGCAGTACA
TTGCACTGTTGAGCAGGCACCAACAGCTTCCTCGCCAGCTCAATTGCGAC
TAGATGGTACTATAATTCATCCCCACGGGACAACTTTGCTATCTGAACGG
ACGACAGCGGAAGTGGGAACGGACGAGGATGCCGAGGCGTTGGGTGCTAC
GGTCGCTCAGCAATTGTTGAAGAATGGCGGACAAGCATTGCTGGAAGAGA
TTCGTCTGTTACAAGAGACCATTGCGACAGATGCAAAATAGATGTCACAA
AACACTACGACCACAGTACAGGAGCTACGCCTGGGCACCCGCAATTCCAA
ACTGGCACTAGTACAAGCGGAGCATGTTTCCAAGGAGCTGACCAGTGCTC
ACCCCGGAGTCCAGTTTCCCTGGCAAACGGTGGTGGTGCGCGGCGATGCC
GACAAAAGTAGCCCTTTCCTGAAATTTGCAGGGCCATCCGACGCAGCAAA
GAACATCTGGACCGAAGAGATGGAAACCAAGCTGTGCGCAGGAGAGCTGG
ACCTCCTCGTGCATTGCCTCAAAGATATGCCGACGCGTCTACCAGAAACC
TGCACACTAGGGGCCATTGTTTATCGGGAAGATCCCACTGATGCGTTGGT
GATAAAGGAGGGGCTGCGGTCGCAGTATACGGATCTGAGTCAACTGCCCC
CCGGTTCTGTGGTGGGCACTAGTTCCACTAGACGGAAAGCCCTACTTCGA
TACAGATACCCGCATTTGAAAGTGGAGGAATGCCGCGGGAACCTCGGAAC
ACGGCTGAAAAAGCTAGATGACCCAGAAGGTCCATTTTCGGCAATCATCC
TGGCCACGGCCGGTATGGTCCGCATCAATCTGGAAGATCGCATTACGAAA
CGCTTGCCTCCCTCGGAGTTCCCGTACGCTGTCGGTCAGGGCGCCCTGGG
CATTGAAATCCGCAAGGAGGACGCCCAGACAAAGACCATGGTTCGAAAAA
TCGAAGACCTGGTTACCCGTCGGATCTGTCTGGCAGAGCGGTCACTGCTA
CGCACTCTTCAGGGCGGCTGCTCGTCTCCAGTCGCAGTACATTGCACTGT
TGAGCAGGCACCAACAGCTTCCTCGCCAGCTCAATTGCGACTAGATGGTA
CTATAATTCATCCCCACGGGACAACTTTGCTATCTGAACGGACGACAGCG
GAAGTGGGAACGGACGAGGATGCCGAGGCGTTGGGTGCTACGGTCGCTCA
GCAATTGTTGAAGAATGGCGGACAAGCATTGCTGGAAGAGATTCGTCTGT
TACAAGAGACCATTGCGACAGATGCAAAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0018160 | peptidyl-pyrromethane cofactor linkage |
| GO:0033014 | tetrapyrrole biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004418 | hydroxymethylbilane synthase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022419 |
| DBxref | InterPro:IPR022417 |
| DBxref | InterPro:IPR022418 |
| DBxref | InterPro:IPR036803 |
| DBxref | InterPro:IPR000860 |
| DBxref | PFAM:PF03900 |
| DBxref | PFAM:PF01379 |
| Product | porphobilinogen deaminase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851928.1 | supercontig | KZ851928.1:251901..253153 + |
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