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M747DRAFT_297752-T1, M747DRAFT_297752-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297752-T1
Unique NameM747DRAFT_297752-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851928.1:316322..317537-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297752-T1 ID=M747DRAFT_297752-T1|Name=M747DRAFT_297752-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1216bp|location=Sequence derived from alignment at KZ851928.1:316322..317537- (Aspergillus niger ATCC 13496)
TCCTCCAGGATATCGCGACCAAACCTCCAATTCCCCCTTGATTTCCTCTA
TAGACCATTGTCAATTACCATAGCGACATCACAATGTCCGCACCCAGACT
CATCAACCGCTTCATGCGGCCATCGACCTCGCCGATCTCTCTGACGACAA
CTTTTGCCCGTCGCTCCTTCGGCAGCTCGGTTGTTCGTCAAAACAGCGTG
AACAACAATGATCGCGCACCATCCACGGCCCCTGAGCATCGCAAGAACCA
GACAAACAAGCCCCCTAACCCCCATGTGCCCAACACGACCTCCACCATGA
CCAAGGACTTCCCCAAGGTCGGCGAGAAGCCGGCTCCCCCCGAGATGTTG
AACTCGGTCGACCCCAACTACCGGCCGGCGGATCCTTACCCCGGGAGAGT
CGAGCATTTCACCGGAGGTCGCCAGGAGACGGGGGCTCAGAAGCCTGAAC
TTGGTGTTGGAGAGATGGAGGGAATTACTTTCAAGGTTGAGCCTCTGCGC
CGGGAGGGCGAAGATGTCACTACTATGAGGGCTCGGTTGTTGTGTTCGTG
ATCCCCGGTTCACGTCTTCCTGGTTGAATGAGTAGCTAATGCAGTTGGGT
AATTGTATAGATCAGAGCCGCAAGCGCGGAATCCTCGAGTCTGATCTCCT
GTTGTCTACGTTCGCCGATGTTTATCTGGCCGATATGAACAAGGAGCAGT
TGCAGGAGTATGACCGGTTCTTGGATGAGAATGACTGGGATATTTACTAC
TGGGCCACGCAGGACCCTCCGGCTGAGGGCAATGAGGCTGCTGTGTCCAC
TGAGGCAGGTGCCCAGGATACTCCCACGGAGACGTGGAAGCGTACTGGAG
CCAAGAGCGGCGAGTGGGCGCAGACGGTTGGTGCTTTCAAGGCTGCATAC
CGGCCCGTTCCGTCACGATGGGCCGACTCCGATGTGCTGCGACTCCTGCG
TCAACATGTTCGGGATAACAGTGCCACGGGATTCCATGCTGCGAAGACCA
AGAAGACTGGTGGGCCTGGACTGGGACGTATGCCCAATGTGCAGGTGTTC
AACAAGTGAGCATTGCTAGTCTGCTGCCATAGGCATGGTGGGTTGTGTAA
GTGACGCGAAATTGTATAGTTGGCTTGTATGATATGTGGGCGAGATTGTA
CAGATTATACACCGGAATGGCTTTACTGGGATATAAGGGGAGGGTTATAA
AAAGCATTGCTATTCG
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Coding sequence (CDS) from alignment at KZ851928.1:316322..317537-

>M747DRAFT_297752-T1 ID=M747DRAFT_297752-T1|Name=M747DRAFT_297752-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1818bp|location=Sequence derived from alignment at KZ851928.1:316322..317537- (Aspergillus niger ATCC 13496)
ATCAGAGCCGCAAGCGCGGAATCCTCGAGTCTGATCTCCTGTTGTCTACG
TTCGCCGATGTTTATCTGGCCGATATGAACAAGGAGCAGTTGCAGGAGTA
TGACCGGTTCTTGGATGAGAATGACTGGGATATTTACTACTGGGCCACGC
AGGACCCTCCGGCTGAGGGCAATGAGGCTGCTGTGTCCACTGAGGCAGGT
GCCCAGGATACTCCCACGGAGACGTGGAAGCGTACTGGAGCCAAGAGCGG
CGAGTGGGCGCAGACGGTTGGTGCTTTCAAGGCTGCATACCGGCCCGTTC
CGTCACGATGGGCCGACTCCGATGTGCTGCGACTCCTGCGTCAACATGTT
CGGGATAACAGTGCCACGGGATTCCATGCTGCGAAGACCAAGAAGACTGG
TGGGCCTGGACTGGGACGTATGCCCAATGTGCAGGTGTTCAACAAGTGAA
TGTCCGCACCCAGACTCATCAACCGCTTCATGCGGCCATCGACCTCGCCG
ATCTCTCTGACGACAACTTTTGCCCGTCGCTCCTTCGGCAGCTCGGTTGT
TCGTCAAAACAGCGTGAACAACAATGATCGCGCACCATCCACGGCCCCTG
AGCATCGCAAGAACCAGACAAACAAGCCCCCTAACCCCCATGTGCCCAAC
ACGACCTCCACCATGACCAAGGACTTCCCCAAGGTCGGCGAGAAGCCGGC
TCCCCCCGAGATGTTGAACTCGGTCGACCCCAACTACCGGCCGGCGGATC
CTTACCCCGGGAGAGTCGAGCATTTCACCGGAGGTCGCCAGGAGACGGGG
GCTCAGAAGCCTGAACTTGGTGTTGGAGAGATGGAGGGAATTACTTTCAA
GGTTGAGCCTCTGCGCCGGGAGGGCGAAGATGTCACTACTATGAGGGCTC
GGTTGTTGTATCAGAGCCGCAAGCGCGGAATCCTCGAGTCTGATCTCCTG
TTGTCTACGTTCGCCGATGTTTATCTGGCCGATATGAACAAGGAGCAGTT
GCAGGAGTATGACCGGTTCTTGGATGAGAATGACTGGGATATTTACTACT
GGGCCACGCAGGACCCTCCGGCTGAGGGCAATGAGGCTGCTGTGTCCACT
GAGGCAGGTGCCCAGGATACTCCCACGGAGACGTGGAAGCGTACTGGAGC
CAAGAGCGGCGAGTGGGCGCAGACGGTTGGTGCTTTCAAGGCTGCATACC
GGCCCGTTCCGTCACGATGGGCCGACTCCGATGTGCTGCGACTCCTGCGT
CAACATGTTCGGGATAACAGTGCCACGGGATTCCATGCTGCGAAGACCAA
GAAGACTGGTGGGCCTGGACTGGGACGTATGCCCAATGTGCAGGTGTTCA
ACAAGTGAATGTCCGCACCCAGACTCATCAACCGCTTCATGCGGCCATCG
ACCTCGCCGATCTCTCTGACGACAACTTTTGCCCGTCGCTCCTTCGGCAG
CTCGGTTGTTCGTCAAAACAGCGTGAACAACAATGATCGCGCACCATCCA
CGGCCCCTGAGCATCGCAAGAACCAGACAAACAAGCCCCCTAACCCCCAT
GTGCCCAACACGACCTCCACCATGACCAAGGACTTCCCCAAGGTCGGCGA
GAAGCCGGCTCCCCCCGAGATGTTGAACTCGGTCGACCCCAACTACCGGC
CGGCGGATCCTTACCCCGGGAGAGTCGAGCATTTCACCGGAGGTCGCCAG
GAGACGGGGGCTCAGAAGCCTGAACTTGGTGTTGGAGAGATGGAGGGAAT
TACTTTCAAGGTTGAGCCTCTGCGCCGGGAGGGCGAAGATGTCACTACTA
TGAGGGCTCGGTTGTTGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Biological Process
TermDefinition
GO:0018293protein-FAD linkage
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_297752M747DRAFT_297752Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297752-T1M747DRAFT_297752-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297752-T1.cdsM747DRAFT_297752-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297752-T1.utr3p1M747DRAFT_297752-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297752-T1.exon2M747DRAFT_297752-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297752-T1.exon1M747DRAFT_297752-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297752-T1.utr5p1M747DRAFT_297752-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR028882
DBxrefInterPro:IPR005631
DBxrefInterPro:IPR036714
DBxrefPFAM:PF03937
Productsuccinate dehydrogenase assembly factor 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851928.1supercontigKZ851928.1:316322..317537 -
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