You are here

Home

M747DRAFT_297753-T1, M747DRAFT_297753-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297753-T1
Unique NameM747DRAFT_297753-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851928.1:317869..319180-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297753-T1 ID=M747DRAFT_297753-T1|Name=M747DRAFT_297753-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1312bp|location=Sequence derived from alignment at KZ851928.1:317869..319180- (Aspergillus niger ATCC 13496)
CTCCTCCCCCTCGGCCACTGCCACAACTGCCATTGACAATGGCGGCCACC
CGTCTCACAATGAGGTCTTTCCTCGGTCTTCTCTTCCTCCTGTTCGTCCA
ACTCACCTCCGCCCTGAAGTTCGACCTCTCTGCTGTGAGCGGGAAGAACG
AGCGATGTATACGCAACTTCGTTTTCAAGGACCAGCTTGTGGTCGTCACC
GCCATTGTGAGCGGAAACAAGGGTGATGGCCAGGTTGTTAACATGCATGT
ATGTGGGAACTCACTCCATCGTCTTTTGTGATGATTGCGGGAGGCACGCT
GGTCGGGCCAGCTGTTGTGTTGTCCTCCGGTGTTCGATTCTACCTTGAGC
TTCTGTCGCTCGCGAAGGAAAAGGATGTACTTGGGCTAACTAGCTTTCTC
TTTTCTGAAATAGATCAAGGATGCGCTGGGCAATGACCACGGTCGTCCTA
AGGACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCTCCCGCCGATACT
GCTTTCGACGTTTGCTTTGACAACCAGCTCACCACTCGTCGTATGTTTAT
CTACCTTGATCATGTTGTATCTTGATGTGCCAGGGATACCAGGTGCTGTG
TAATGTGCGTGTGTATGTGGTACTAACCAGACGACAAATAGACGCCGTTG
CCAACCCCTACAAGTCCATCGAGCTCGATGTCGACATTGGTGCCGATGCC
CGTGACTGGTCTAGCATTCAGGTTCAGGAGAAGCTCAAGCCTGTTGAGAC
CGACCTCCGCCGTATCGAAGAGATGGTGGCCGAGATTGTCAGCGAGATGG
AGTACCTGCGCGCTCGTGAGCAGAAGCTGCGTGATACCAACGAGAGCACG
AACGAGCGTGTGAAGTGGTTCGCTTTCGGTACTATGGGTATGCTGGTTGG
ATTGGGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACTTCAGGTATGTTC
TTTTCTATCGCTTCTTCCGTTGGGTCTGGTATTCGGGTAATGTGGCTAAC
AGCTTTGGATTTGTAGATCCAAGCATCTTATCTAGACCATGTCGTCTTAA
AACTAGAATCGTGAGAAAGAGAAGGTTCCAGGTTGATGCTTTCTCTCTTG
TCATGACAAAATATGGACTATTTCTTTTCAATGCATTTCATTATCGTCTT
GACCCTATGTAGTTCCGGGATTTGCTTCACGGTACACTGATTGAATATTG
ACGAGGAGTATGACAACTATGCATGTACAACGGTGCTGGTGATCGGTATT
GTTTCCTTTATTTTTAGCCGTCTTTAACCACATAAGGGGAGGCCATTTTC
CCAAGCTTGAAA
back to top

Coding sequence (CDS) from alignment at KZ851928.1:317869..319180-

>M747DRAFT_297753-T1 ID=M747DRAFT_297753-T1|Name=M747DRAFT_297753-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2544bp|location=Sequence derived from alignment at KZ851928.1:317869..319180- (Aspergillus niger ATCC 13496)
ATCCAAGCATCTTATCTAGACGCCGTTGCCAACCCCTACAAGTCCATCGA
GCTCGATGTCGACATTGGTGCCGATGCCCGTGACTGGTCTAGCATTCAGG
TTCAGGAGAAGCTCAAGCCTGTTGAGACCGACCTCCGCCGTATCGAAGAG
ATGGTGGCCGAGATTGTCAGCGAGATGGAGTACCTGCGCGCTCGTGAGCA
GAAGCTGCGTGATACCAACGAGAGCACGAACGAGCGTGTGAAGTGGTTCG
CTTTCGGTACTATGGGTATGCTGGTTGGATTGGGTGCTTGGCAGGTCGTG
TATCTGAGGGCTTACTTCAGATCAAGGATGCGCTGGGCAATGACCACGGT
CGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCTCCCGC
CGATACTGCTTTCGACGTTTGCTTTGACAACCAGCTCACCACTCGTCATG
AGGTCTTTCCTCGGTCTTCTCTTCCTCCTGTTCGTCCAACTCACCTCCGC
CCTGAAGTTCGACCTCTCTGCTGTGAGCGGGAAGAACGAGCGATGTATAC
GCAACTTCGTTTTCAAGGACCAGCTTGTGGTCGTCACCGCCATTGTGAGC
GGAAACAAGGGTGATGGCCAGGTTGTTAACATGCATATCCAAGCATCTTA
TCTAGACGCCGTTGCCAACCCCTACAAGTCCATCGAGCTCGATGTCGACA
TTGGTGCCGATGCCCGTGACTGGTCTAGCATTCAGGTTCAGGAGAAGCTC
AAGCCTGTTGAGACCGACCTCCGCCGTATCGAAGAGATGGTGGCCGAGAT
TGTCAGCGAGATGGAGTACCTGCGCGCTCGTGAGCAGAAGCTGCGTGATA
CCAACGAGAGCACGAACGAGCGTGTGAAGTGGTTCGCTTTCGGTACTATG
GGTATGCTGGTTGGATTGGGTGCTTGGCAGGTCGTGTATCTGAGGGCTTA
CTTCAGATCAAGGATGCGCTGGGCAATGACCACGGTCGTCCTAAGGACAT
TGCCGGAGAGACTCGTCAGGCCTTCACTTCTCCCGCCGATACTGCTTTCG
ACGTTTGCTTTGACAACCAGCTCACCACTCGTCATGAGGTCTTTCCTCGG
TCTTCTCTTCCTCCTGTTCGTCCAACTCACCTCCGCCCTGAAGTTCGACC
TCTCTGCTGTGAGCGGGAAGAACGAGCGATGTATACGCAACTTCGTTTTC
AAGGACCAGCTTGTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGA
TGGCCAGGTTGTTAACATGCATATCCAAGCATCTTATCTAGACGCCGTTG
CCAACCCCTACAAGTCCATCGAGCTCGATGTCGACATTGGTGCCGATGCC
CGTGACTGGTCTAGCATTCAGGTTCAGGAGAAGCTCAAGCCTGTTGAGAC
CGACCTCCGCCGTATCGAAGAGATGGTGGCCGAGATTGTCAGCGAGATGG
AGTACCTGCGCGCTCGTGAGCAGAAGCTGCGTGATACCAACGAGAGCACG
AACGAGCGTGTGAAGTGGTTCGCTTTCGGTACTATGGGTATGCTGGTTGG
ATTGGGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACTTCAGATCAAGGA
TGCGCTGGGCAATGACCACGGTCGTCCTAAGGACATTGCCGGAGAGACTC
GTCAGGCCTTCACTTCTCCCGCCGATACTGCTTTCGACGTTTGCTTTGAC
AACCAGCTCACCACTCGTCATGAGGTCTTTCCTCGGTCTTCTCTTCCTCC
TGTTCGTCCAACTCACCTCCGCCCTGAAGTTCGACCTCTCTGCTGTGAGC
GGGAAGAACGAGCGATGTATACGCAACTTCGTTTTCAAGGACCAGCTTGT
GGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGATGGCCAGGTTGTTA
ACATGCATATCCAAGCATCTTATCTAGACGCCGTTGCCAACCCCTACAAG
TCCATCGAGCTCGATGTCGACATTGGTGCCGATGCCCGTGACTGGTCTAG
CATTCAGGTTCAGGAGAAGCTCAAGCCTGTTGAGACCGACCTCCGCCGTA
TCGAAGAGATGGTGGCCGAGATTGTCAGCGAGATGGAGTACCTGCGCGCT
CGTGAGCAGAAGCTGCGTGATACCAACGAGAGCACGAACGAGCGTGTGAA
GTGGTTCGCTTTCGGTACTATGGGTATGCTGGTTGGATTGGGTGCTTGGC
AGGTCGTGTATCTGAGGGCTTACTTCAGATCAAGGATGCGCTGGGCAATG
ACCACGGTCGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTCACT
TCTCCCGCCGATACTGCTTTCGACGTTTGCTTTGACAACCAGCTCACCAC
TCGTCATGAGGTCTTTCCTCGGTCTTCTCTTCCTCCTGTTCGTCCAACTC
ACCTCCGCCCTGAAGTTCGACCTCTCTGCTGTGAGCGGGAAGAACGAGCG
ATGTATACGCAACTTCGTTTTCAAGGACCAGCTTGTGGTCGTCACCGCCA
TTGTGAGCGGAAACAAGGGTGATGGCCAGGTTGTTAACATGCAT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERV25M747DRAFT_297753Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297753-T1M747DRAFT_297753-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297753-T1.cdsM747DRAFT_297753-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297753-T1.utr3p1M747DRAFT_297753-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297753-T1.exon4M747DRAFT_297753-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_297753-T1.exon3M747DRAFT_297753-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_297753-T1.exon2M747DRAFT_297753-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297753-T1.exon1M747DRAFT_297753-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297753-T1.utr5p1M747DRAFT_297753-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
DBxrefInterPro:IPR009038
DBxrefPFAM:PF01105
Productvesicle coat component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851928.1supercontigKZ851928.1:317869..319180 -
Powered by Drupal