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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851929.1:46267..48046+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_297806-T1 ID=M747DRAFT_297806-T1|Name=M747DRAFT_297806-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1780bp|location=Sequence derived from alignment at KZ851929.1:46267..48046+ (Aspergillus niger ATCC 13496)
ATCACGGGAACGCGATTCCCAATCGGGAACTCGCGTTTCCAGTCACGGGC
GACTTGAGGAAAATCCTCCAGTTTCACGATTTGGTCGCTGTCTCTGCCCG
CTAGATCCCACCATGCGTCGACTGTCGCCCTTGTTACGGCAGCCTTTGCT
TTCTCGGAAACCTCCAATCAGGGGACGATTGGTCCCTTGGCCATCAGTGA
GGGCGCAATGGCTCTCATCGACGTCGTCCCGGCTCTGCTCGTGCTCTGAC
CCGCAGCCCGGACAGCCTCAGGCTCAATCTTCGACCCCAGCCGATTATCG
CGCCCTGGGAACCTCCCAGGACCTTTTCACAACCTCAGTCTACAGCCCCG
GATCGCCTCTGTTCCTCCCCAATGGCACCCATATCATCAACAAACTCATC
ACCTTTCTCCGCACGCAGTACCTTCAATATGGTTTTCGCGAAGTCCTGAC
CCCGACGATCTACAAACGTTCCCTCTGGGAAGTCTCCGGCCATTGGCAGA
ATTACAAAGATGATATGTACGAGGTGCGCGGTAGGGGGGCTACTGGAGAT
ACGGACGGAGAAGCGGGAGAGGATGAGTCCTACGGCCTGAAGCCGATGAA
CTGCCCCGGCCACTGCCTGCTATTCAAATCGCAGACGCATTCTTACCGGG
AACTGCCCATCCGCTACGCCGATTTCAGTCCGCTTCATCGGAATGAGGTT
TCGGGTTCGTTAAGCGGACTTACCCGTGTCCGCCGTTTCCATCAAGACGA
TGGGCATATTTTCTGTCGACCGCAGCAGATTAAGGGGGAAATCGCTTCGG
CACTTGGATTCGTGGACTTGGTTATGACAACATTCGGACTGGGGCCGTAT
CGCTTAGTCCTTTCCACAAGGCCAGAGAAGGACTTCATCGGTAGTTTGGA
ATTGTGGAATAGTGCCGAAGCCCAATTGCGCGAGGCACTCGACAATACAG
GCAGGGAATGGGCCATGAACGAAGGTGACGGAGCATTCTACGGCCCCAAA
ATCGACATCCAGCTTCAAGACAAAGCAGGAAAATACCACCAACTCTCCAC
CATCCAGCTTGATATGAATCTCCCTCAGCGATTTGGGCTCGAGTACCAGG
TCGCTGAAGGTGAGGAGGATTACAACCCGGAGACCCCAGGCAAGGCGACC
CCGGTGATGATCCATCGGGCAAACTTCGGCTCTCTGGAGCGGTTCTTAGC
GCTGCTCATCGAGGAATACGCTGGTCGCTGGCCGTTCTGGCTTTCTCCGC
GCCAGGGTATCGTCCTAACCGTGAACCAAGATGAGGCCGTCGTACAGCAG
GCTCACGAAGCGGCTGCCAAAATCTCTGGATTCCGCGCCCTTCAGCCCGG
CCAAATGGGGACTGATGCACCCCAGCCCATCTCCTCGGTTGACTCCACAT
TCTTGATCGATGTGGACAGCAGTGGCCAATCGCTGAACAAGAAAATCCAG
CGAGCCAAGCATATGAAGTACAACCTCATCTTCATCCTGGGACCCAAGGA
CGTCGCTGCCTCTCGCATCACGGTGGACGTGACAGGTCAGCTGCAGAGCA
AACCCGAACGTGGGGTGCAGAAGCTGCAAGACATCCTGACGCAACGATTG
GGCGAGAAGGCCTTGAAGAACCCTCGGGCCATTCCCCTACCCGTAGATGA
CGTGCACGAACTTCTGGTGCAGCTGGAGAAGCAATTTGTATAATACTATG
ACGGTGATGTGTAGATATAAATCATGTATAATAGAAACCATTATTTCGCA
CCCAAGTTGTCTGTGGGTGTTGGCTGGGAG back to topCoding sequence (CDS) from alignment at KZ851929.1:46267..48046+ >M747DRAFT_297806-T1 ID=M747DRAFT_297806-T1|Name=M747DRAFT_297806-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1581bp|location=Sequence derived from alignment at KZ851929.1:46267..48046+ (Aspergillus niger ATCC 13496)
ATGCGTCGACTGTCGCCCTTGTTACGGCAGCCTTTGCTTTCTCGGAAACC
TCCAATCAGGGGACGATTGGTCCCTTGGCCATCAGTGAGGGCGCAATGGC
TCTCATCGACGTCGTCCCGGCTCTGCTCGTGCTCTGACCCGCAGCCCGGA
CAGCCTCAGGCTCAATCTTCGACCCCAGCCGATTATCGCGCCCTGGGAAC
CTCCCAGGACCTTTTCACAACCTCAGTCTACAGCCCCGGATCGCCTCTGT
TCCTCCCCAATGGCACCCATATCATCAACAAACTCATCACCTTTCTCCGC
ACGCAGTACCTTCAATATGGTTTTCGCGAAGTCCTGACCCCGACGATCTA
CAAACGTTCCCTCTGGGAAGTCTCCGGCCATTGGCAGAATTACAAAGATG
ATATGTACGAGGTGCGCGGTAGGGGGGCTACTGGAGATACGGACGGAGAA
GCGGGAGAGGATGAGTCCTACGGCCTGAAGCCGATGAACTGCCCCGGCCA
CTGCCTGCTATTCAAATCGCAGACGCATTCTTACCGGGAACTGCCCATCC
GCTACGCCGATTTCAGTCCGCTTCATCGGAATGAGGTTTCGGGTTCGTTA
AGCGGACTTACCCGTGTCCGCCGTTTCCATCAAGACGATGGGCATATTTT
CTGTCGACCGCAGCAGATTAAGGGGGAAATCGCTTCGGCACTTGGATTCG
TGGACTTGGTTATGACAACATTCGGACTGGGGCCGTATCGCTTAGTCCTT
TCCACAAGGCCAGAGAAGGACTTCATCGGTAGTTTGGAATTGTGGAATAG
TGCCGAAGCCCAATTGCGCGAGGCACTCGACAATACAGGCAGGGAATGGG
CCATGAACGAAGGTGACGGAGCATTCTACGGCCCCAAAATCGACATCCAG
CTTCAAGACAAAGCAGGAAAATACCACCAACTCTCCACCATCCAGCTTGA
TATGAATCTCCCTCAGCGATTTGGGCTCGAGTACCAGGTCGCTGAAGGTG
AGGAGGATTACAACCCGGAGACCCCAGGCAAGGCGACCCCGGTGATGATC
CATCGGGCAAACTTCGGCTCTCTGGAGCGGTTCTTAGCGCTGCTCATCGA
GGAATACGCTGGTCGCTGGCCGTTCTGGCTTTCTCCGCGCCAGGGTATCG
TCCTAACCGTGAACCAAGATGAGGCCGTCGTACAGCAGGCTCACGAAGCG
GCTGCCAAAATCTCTGGATTCCGCGCCCTTCAGCCCGGCCAAATGGGGAC
TGATGCACCCCAGCCCATCTCCTCGGTTGACTCCACATTCTTGATCGATG
TGGACAGCAGTGGCCAATCGCTGAACAAGAAAATCCAGCGAGCCAAGCAT
ATGAAGTACAACCTCATCTTCATCCTGGGACCCAAGGACGTCGCTGCCTC
TCGCATCACGGTGGACGTGACAGGTCAGCTGCAGAGCAAACCCGAACGTG
GGGTGCAGAAGCTGCAAGACATCCTGACGCAACGATTGGGCGAGAAGGCC
TTGAAGAACCCTCGGGCCATTCCCCTACCCGTAGATGACGTGCACGAACT
TCTGGTGCAGCTGGAGAAGCAATTTGTATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006418 | tRNA aminoacylation for protein translation |
| GO:0006435 | threonyl-tRNA aminoacylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004812 | aminoacyl-tRNA ligase activity |
| GO:0000166 | nucleotide binding |
| GO:0005524 | ATP binding |
| GO:0004829 | threonine-tRNA ligase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033728 |
| DBxref | InterPro:IPR006195 |
| DBxref | InterPro:IPR036621 |
| DBxref | InterPro:IPR002314 |
| DBxref | InterPro:IPR002320 |
| DBxref | PFAM:PF00587 |
| Product | class II aaRS and biotin synthetase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851929.1 | supercontig | KZ851929.1:46267..48046 + |
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