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M747DRAFT_297907-T1, M747DRAFT_297907-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297907-T1
Unique NameM747DRAFT_297907-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851930.1:12285..13790-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297907-T1 ID=M747DRAFT_297907-T1|Name=M747DRAFT_297907-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1506bp|location=Sequence derived from alignment at KZ851930.1:12285..13790- (Aspergillus niger ATCC 13496)
TCTTCATTCTTCCACTGGCACTTCGTTCACCAACTGACTCCAACTCAATC
AATTACACCAGAAACTAAATCAACGCAGCGCAAAATGCGCTCCCTCCTCT
CCGTCCTCTCCCGGACGGGCTCAAGAACCACTCCCCTACGCCCCACATCC
TCAATCCTGCGCACCGCTCTCAACAGAACAGGAACAGCAGCAGGACCGGA
CTCCCTCTGCACGCGCTGCCTCCGCCGCACCAACAACACCACCCAGCTTC
GCTTCTACAACAACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTC
GTCGATGCCCCCTCCCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGG
ACTGATCATTCTCGGTGCGCCATAACCCCATCCATTCCAACCTCATAACC
ATAGACTAACATACAATGATGAAATACAGCACTAATCCCCATAATCTCCT
TCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAAAACGAACTTA
ATTGCCAAATTCGAAGACCGGCTAATCAAGCCCCCGCTGCCTCTACCCCC
GCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCGTCG
CGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTGGGTCCGCGCATG
CGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGCCGCTGGAGCGCGAGGG
TGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAGATGAAGG
AGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGGA
GAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGTGGAAGAAGAATATGTT
TACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGATATTG
AGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAGACT
ATGGGTATGTTATTCTTCCTGCTTCAATTTGTCTTTTCGACTTGGTTTGG
CTTTGGCTATGTATTGGGACGAAGAAGCTAATCTAGGATGCTGGATCAGT
CCCCGATATGGTTGAGGCGATGGATCGCGAGGCCAAGGGTATTCCTATTG
GCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGCCAGTATATCTTT
ACTTGGTAAGTTTCTTTCCTCCGTTCCTCGGATGCTGCATGACTGCATGG
CTGCATGGCTGCATGGATCCTGGCTAACGGCTGCGCAGGTACGGCTTGTC
GCTGGCAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTCCCAACG
AGGCTACTCGGCGTGTGCGCCAGAACCGGAACTGGTAGTGGCTCCTGCCC
CGCATGCTGGACGGCGTCTGGACTTGTATCTATAGGAATTGTATATCTAT
ACCATCATGGTGGCATGGCCAATCTCATATCTTGCAGCAGCTCCTTGGGC
AGGTGCTTTTGCGCCAGCGAGAAGATCGTGGTGGACTGGTTAACGTGCCG
TTGCCT
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Coding sequence (CDS) from alignment at KZ851930.1:12285..13790-

>M747DRAFT_297907-T1 ID=M747DRAFT_297907-T1|Name=M747DRAFT_297907-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4044bp|location=Sequence derived from alignment at KZ851930.1:12285..13790- (Aspergillus niger ATCC 13496)
GTACGGCTTGTCGCTGGCAACCTCCATCATGCTGTGGATGATCATCCGCA
AGCGTCCCAACGAGGCTACTCGGCGTGTGCGCCAGAACCGGAACTGGTAG
TCCCCGATATGGTTGAGGCGATGGATCGCGAGGCCAAGGGTATTCCTATT
GGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGCCAGTATATCTT
TACTTGCACTAATCCCCATAATCTCCTTCGCCCTCGGAACATGGCAAATT
CAACGCCTAGAGTGGAAAACGAACTTAATTGCCAAATTCGAAGACCGGCT
AATCAAGCCCCCGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCT
CCGAGTTCGATTACCGCCGTGTCGTCGCGACGGGGACGCTGCGACATGAT
CAGGAGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTT
TGTGGTGACGCCGCTGGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATC
GGGGGTGGATTAGTCGGAAGATGAAGGAGAAGAGGGATAGATTGAGGCAG
GGGGAAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTT
GAGGGAACCGTGGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTG
AGGGAAAGTTTTATTTCCCTGATATTGAGCAGATGGCGGAGTTGACGGGG
AGTCAGCCCGTTTGGATTGAGGAGACTATGGATGCGCTCCCTCCTCTCCG
TCCTCTCCCGGACGGGCTCAAGAACCACTCCCCTACGCCCCACATCCTCA
ATCCTGCGCACCGCTCTCAACAGAACAGGAACAGCAGCAGGACCGGACTC
CCTCTGCACGCGCTGCCTCCGCCGCACCAACAACACCACCCAGCTTCGCT
TCTACAACAACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTCGTC
GATGCCCCCTCCCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGGACT
GATCATTCTCGGTACGGCTTGTCGCTGGCAACCTCCATCATGCTGTGGAT
GATCATCCGCAAGCGTCCCAACGAGGCTACTCGGCGTGTGCGCCAGAACC
GGAACTGGTAGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGCCAAGG
GTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGC
CAGTATATCTTTACTTGCACTAATCCCCATAATCTCCTTCGCCCTCGGAA
CATGGCAAATTCAACGCCTAGAGTGGAAAACGAACTTAATTGCCAAATTC
GAAGACCGGCTAATCAAGCCCCCGCTGCCTCTACCCCCGCGGGTCGACCC
GTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCGTCGCGACGGGGACGC
TGCGACATGATCAGGAGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAG
GATGGGTTCTTTGTGGTGACGCCGCTGGAGCGCGAGGGTGGGAGTACGGT
GTTGGTGAATCGGGGGTGGATTAGTCGGAAGATGAAGGAGAAGAGGGATA
GATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTG
GAGGGATTGTTGAGGGAACCGTGGAAGAAGAATATGTTTACGCCGGATAA
TGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGATATTGAGCAGATGGCGG
AGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAGACTATGGATGCGCTC
CCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCCCCTACGCC
CCACATCCTCAATCCTGCGCACCGCTCTCAACAGAACAGGAACAGCAGCA
GGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAACAACACCAC
CCAGCTTCGCTTCTACAACAACAACCAATTTACCGACGACCAGCGCTGGC
TCTCCGTCGTCGATGCCCCCTCCCAAGTCGTCCGCACAGGCCGGAAACAT
GGTCCGGGACTGATCATTCTCGGTACGGCTTGTCGCTGGCAACCTCCATC
ATGCTGTGGATGATCATCCGCAAGCGTCCCAACGAGGCTACTCGGCGTGT
GCGCCAGAACCGGAACTGGTAGTCCCCGATATGGTTGAGGCGATGGATCG
CGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGA
ACAACCACAGCCAGTATATCTTTACTTGCACTAATCCCCATAATCTCCTT
CGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAAAACGAACTTAA
TTGCCAAATTCGAAGACCGGCTAATCAAGCCCCCGCTGCCTCTACCCCCG
CGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCGTCGC
GACGGGGACGCTGCGACATGATCAGGAGATGCTGGTGGGTCCGCGCATGC
GGGAGGGCCAGGATGGGTTCTTTGTGGTGACGCCGCTGGAGCGCGAGGGT
GGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAGATGAAGGA
GAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGGAG
AGGTCGTGGTGGAGGGATTGTTGAGGGAACCGTGGAAGAAGAATATGTTT
ACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGATATTGA
GCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAGACTA
TGGATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCAC
TCCCCTACGCCCCACATCCTCAATCCTGCGCACCGCTCTCAACAGAACAG
GAACAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACC
AACAACACCACCCAGCTTCGCTTCTACAACAACAACCAATTTACCGACGA
CCAGCGCTGGCTCTCCGTCGTCGATGCCCCCTCCCAAGTCGTCCGCACAG
GCCGGAAACATGGTCCGGGACTGATCATTCTCGGTACGGCTTGTCGCTGG
CAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTCCCAACGAGGCT
ACTCGGCGTGTGCGCCAGAACCGGAACTGGTAGTCCCCGATATGGTTGAG
GCGATGGATCGCGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCTGAAGT
CAACCTCAAGAACAACCACAGCCAGTATATCTTTACTTGCACTAATCCCC
ATAATCTCCTTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAA
AACGAACTTAATTGCCAAATTCGAAGACCGGCTAATCAAGCCCCCGCTGC
CTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGC
CGTGTCGTCGCGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTGGG
TCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGCCGCTGG
AGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGG
AAGATGAAGGAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCT
GCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGTGGAAGA
AGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTC
CCTGATATTGAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGAT
TGAGGAGACTATGGATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGC
TCAAGAACCACTCCCCTACGCCCCACATCCTCAATCCTGCGCACCGCTCT
CAACAGAACAGGAACAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCC
TCCGCCGCACCAACAACACCACCCAGCTTCGCTTCTACAACAACAACCAA
TTTACCGACGACCAGCGCTGGCTCTCCGTCGTCGATGCCCCCTCCCAAGT
CGTCCGCACAGGCCGGAAACATGGTCCGGGACTGATCATTCTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_297907M747DRAFT_297907Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297907-T1M747DRAFT_297907-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297907-T1.cdsM747DRAFT_297907-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297907-T1.utr3p1M747DRAFT_297907-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297907-T1.exon4M747DRAFT_297907-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_297907-T1.exon3M747DRAFT_297907-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_297907-T1.exon2M747DRAFT_297907-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297907-T1.exon1M747DRAFT_297907-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297907-T1.utr5p1M747DRAFT_297907-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263V60
DBxrefInterPro:IPR002994
DBxrefPFAM:PF02104
ProductCOX1 assembly protein Shy1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851930.1supercontigKZ851930.1:12285..13790 -
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