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M747DRAFT_297989-T1, M747DRAFT_297989-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297989-T1
Unique NameM747DRAFT_297989-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851930.1:291260..292549+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297989-T1 ID=M747DRAFT_297989-T1|Name=M747DRAFT_297989-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1290bp|location=Sequence derived from alignment at KZ851930.1:291260..292549+ (Aspergillus niger ATCC 13496)
GACGACCCTCACGACACCCGTCCGAGTTCTCCCACGACCTTTAGGTGGCA
TATTCACAATGGCTGTCAGGAACTCCAGTGCGTCGTCCTGTTCTGTCGAT
TTTTCTCGAAGTCGCCAATCCAATCCATACTAATTTGACTTCGTGATGAT
TTCAGGTCTCGCCTCTTCTCGCCGCAAGTCGCGCGCCGCCCACTTCAACG
CCCCCTCCAGCGAGCGCCGCGTTATCCTCTCTGCTCCTCTCTCGAGCGAG
CTCCGCGCCAAGTACAATGTACGTTCGATCAGACCGATGTGATTCTTGTT
TTTGCAGCCCCTGGGATGTGTGTGTTTTTGGAGATGGATTTGGCATGGTT
TCTTTCTTTCCGGTCGGGGACAGGCTGGATCAGGCCAGCGAGATTGGGAT
TTGGGAGGAAGATGCAAGAACCAGATCCAATCGACAAACATCCAATCCGA
GATATCAGGCACAACGAAACAATACTGGGAGAAATGGTTCTAACGCAGTC
GTTTGATAGGTCCGCTCCATGCCCATCCGCAAGGACGACGAGGTGAGCCA
AGGCTGATTCTAACCCGACATCTAACCCACTCGCTAAACTGAGAACAAGG
TCATGGTCGTCCGTGGCAGCAACAAGGGCCGTGAGGGCAAGGTCACCAGC
GTCTACCGCCTGAAGTGGGCCATCCACGTCGAGCGCATCAGCCGCGACAA
GAGCAACGGCCAGAGCGTCCCCATCCCCCTCCACCCCTCCAACGTCGTCA
TCAAGAAGCTCCACCTCGACAAGGACCGTGAGGCCATCCTTGAGCGTGTT
GGCAAGGGTCGTGAGGCCGTCAAGGCCAAGTCCGCTTAAATCGGGGGATT
TTTGTGAGGTTTAGTTCATATCTGGCAAATGGCAGTGATAACGCGGGAGT
TCCGGAAGACGCGAACAATATGGGATCTTGCCTACAGTCGGGATATATCT
ATAAAACATGATGTATTCTGATGAATGAAAAACGAAAAATTCAATTTCCT
CTACCTACTTCAATTCGGCACCCCCCAGAGATTTGCGTGTTCTATCCGGC
GGACTGGCTGCTGCGACCGTTTCCGGGGACTACTTATATCTCCGGACGGA
GCAGCAGAGCACGGTGCTTTCTCTATCTCGGGAATAGATATTGGGATAGA
AGGTTGTCGTCCGGACCTGTTCGCCAGCCAGCACTTCCGAATCAACCCCA
GTTCTGAAGCCATTGCACTTGTGACTGTAGAGCAGTGCTGCCCCTTGTTC
TTCACAGTAGCCTATCCCCTCTGGCTGTCTTCAAAATCCC
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Coding sequence (CDS) from alignment at KZ851930.1:291260..292549+

>M747DRAFT_297989-T1 ID=M747DRAFT_297989-T1|Name=M747DRAFT_297989-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1620bp|location=Sequence derived from alignment at KZ851930.1:291260..292549+ (Aspergillus niger ATCC 13496)
ATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCGCCGCAAGTCGCGCGC
CGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATCCTCTCTGCTC
CTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTCCGCTCCATGCCCATC
CGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAGCAACAAGGGCCGTGA
GGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGTCGAGC
GCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCCTCCAC
CCCTCCAACGTCGTCATCAAGAAGCTCCACCTCGACAAGGACCGTGAGGC
CATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAAGTCCG
CTTAAATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCGCCGCAAGTCG
CGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATCCTCTC
TGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTCCGCTCCATGC
CCATCCGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAGCAACAAGGGC
CGTGAGGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGT
CGAGCGCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCC
TCCACCCCTCCAACGTCGTCATCAAGAAGCTCCACCTCGACAAGGACCGT
GAGGCCATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAA
GTCCGCTTAAATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCGCCGCA
AGTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATC
CTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTCCGCTC
CATGCCCATCCGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAGCAACA
AGGGCCGTGAGGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATC
CACGTCGAGCGCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCAT
CCCCCTCCACCCCTCCAACGTCGTCATCAAGAAGCTCCACCTCGACAAGG
ACCGTGAGGCCATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAG
GCCAAGTCCGCTTAAATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCG
CCGCAAGTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCG
TTATCCTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTC
CGCTCCATGCCCATCCGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAG
CAACAAGGGCCGTGAGGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGG
CCATCCACGTCGAGCGCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTC
CCCATCCCCCTCCACCCCTCCAACGTCGTCATCAAGAAGCTCCACCTCGA
CAAGGACCGTGAGGCCATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCG
TCAAGGCCAAGTCCGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015934large ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL26AM747DRAFT_297989Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297989-T1M747DRAFT_297989-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297989-T1.utr5p1M747DRAFT_297989-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297989-T1.exon1M747DRAFT_297989-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_297989-T1.exon2M747DRAFT_297989-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297989-T1.exon3M747DRAFT_297989-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_297989-T1.exon4M747DRAFT_297989-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297989-T1.cdsM747DRAFT_297989-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297989-T1.utr3p1M747DRAFT_297989-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265DAV
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR041988
DBxrefInterPro:IPR005825
DBxrefInterPro:IPR005756
DBxrefInterPro:IPR014722
DBxrefInterPro:IPR005824
DBxrefPFAM:PF16906
DBxrefPFAM:PF00467
Product60S ribosomal protein L26A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851930.1supercontigKZ851930.1:291260..292549 +
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